Pseudoliparis swirei (Mariana hadal snailfish): 130192515
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Entry
130192515 CDS
T09868
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130192515 (trpm5)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130192515 (trpm5)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
Motif
Other DBs
NCBI-GeneID:
130192515
NCBI-ProteinID:
XP_056268533
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Position
4:complement(31303027..31332458)
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AA seq
1231 aa
AA seq
DB search
MQEKQGTPMGTLRPQTRCLRCGEVLQWSEELSVPLGCSCSSTVDETLQKAARGLTGRMKK
AKSNWAAGRVGDIDFVGFTKTRGKFVRVSSDTDPVLIYQMLTEEWGLAPPHLVVALVGGD
EPTQIKPWLRDTLRKGLVKATQSTGAWILTNGLRYGITKHLGQAVRDHSLASTSSKVRVV
AIGIAPWNMIHNREALISKAGEPAVYTPQDLPHGSVYSLDSHHSHFVLVDEDPERPGATN
EMRVKLLKHVSLQRTGYGGVGSFEIPVLCLLVHGEPRILERMHKGIGNSTPWLILAGSGG
VADMLVTLMNKGCWDAEAVHELLLDTFPNEHHGTDVSNWVKLIKKILDHVHLLTVHDPEQ
ESTELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFNGDVDWKACDLE
EVMMDALINDKPDFVRLFVDNGVNLAEFLTYGRLQELYWSVSEKSLLHSLLLKKYEEKQL
LLRAGRKPGPPGHHPPETGERKPRFTLFEVAKVLKDFLHDSCKGFYQKIPTEKPAKGRLF
HTQKNLVEFEDRCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKILKEMARL
ESEAESARSMKEAKYEQFALDVFGECYSNSEDRAHALLVRRTHCWSKSTVLNLATEADAK
AFFAHDGVQALLTKIWWGTMRTDTSISKLVVAFFCPPLIWTNLIKFSDEELDNRTSRDQF
VELDSLDTEKALLLTDDDDPLDSSPGGPEAQSCASVWWRFLLRRWRRFWCAAVTVFLGNV
LMYFAFLFLFTYVLLLDFRPPPPLGPGLYEIMLYFWVFTLVLEELRQSFFTDEEMSILKK
FKLYVEDNWNKCDMVAISLFVIGISCRMVDYTYEAGRTVLAIDFMVFTLRLIHIFAIHKQ
LGPKIIIVERMMKDVFFFLFFLGVWMIAYGVATQALLHPNDPRIDWVFRRALYRPYLHIF
GQIPLEEIDAARMPHINCTNDSDEIILGLRPPCPNVYANWLVILLLVIFLLVTNVLLLNL
LIAMFSYTFQVVQGNADIFWKFQRYNLIVEYHSRPALAPPFIIISHLSQLLLSMVKQPEP
KQEVLERELPEGLDQRMITWETVQKENYLAKLERQHWESSEERLKSTSSNIEYVLRVQSL
LRVVGGFKDQEKRLTSVEVQVRYCSEVLSWMAECFARSTLKCGKDAPRAPVSLSSATSQG
QPEREAKPEEDEARPGHSGCGANKRFTHVDE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaaacaaggcacacctatgggcacgctgcggccgcagacgcgatgcctgcga
tgcggcgaagtgctgcagtggtccgaggagctcagcgtgccgctgggctgctcctgctcc
tccacagtggacgagacgctgcagaaagccgccagaggcctcaccggcagaatgaagaag
gcgaagagcaactgggccgccgggagggtgggcgacatcgacttcgtcgggttcacgaag
accagaggaaagttcgtgagggtgagcagcgacaccgacccggtgctgatctaccagatg
ttgacggaggagtggggcctcgccccgccgcacctggtggtggcgctggtgggcggggat
gagccgactcagataaagccctggctcagagacactctgaggaagggactggtgaaggct
acgcagagcacaggggcgtggattctgactaacggcctccgctacggcatcaccaagcac
ctgggccaggcggtgagggatcactcgttggccagcacctcctccaaagtccgcgtcgtg
gccattggcatcgcgccctggaacatgatccacaaccgagaggcgctcatcagcaaggcg
ggcgagccggcagtgtacacgccgcaggatttgccccacggctcggtctactccctggac
agccaccactcccactttgtgctggtggacgaggatcccgaaagaccgggagccaccaat
gagatgagggtcaagctgctgaaacacgtctctctccagcgcaccggttatggaggtgtc
ggcagtttcgagatccctgttctgtgtctcctggtccacggggagcctcggatcctggag
aggatgcacaaaggcatcggcaactccacgccgtggctgatcctggcaggctcgggaggc
gtggccgacatgctcgtcacgctgatgaacaaaggctgctgggacgcggaagctgttcac
gagctgctgctggacacctttcccaatgaacaccacggcaccgacgtcagtaactgggtt
aaactgatcaagaagatactcgatcacgtgcatctcctcaccgtccacgaccctgaacag
gaaagcaccgagctggacacggtcatcctcaaagctctggtcaaggcctgtaagagccaa
agccaggaagcccaagacttcctggacgagctgaagctggcggtggcctggaaccgggtg
gacatcgccaagagcgacatcttcaatggagacgtggactggaaggcatgcgaccttgaa
gaggtcatgatggacgcgctcatcaacgacaaacccgactttgtgcgcctctttgtggac
aacggcgtgaacctggccgagttcctgacctacggccgcctgcaggagctctactggtcc
gtgtcggagaagagcctcctccacagcctgctcctcaaaaagtacgaggagaagcagctc
ctgctccgagccgggaggaagcccggtccacccgggcaccacccgcccgagacaggggaa
cgaaaaccccgcttcaccctcttcgaggtcgccaaagtgctgaaagacttcctccacgac
tcctgcaaaggcttttaccagaagatccccacagagaagccggcgaagggccgactgttc
cacacccagaagaacctggtggagttcgaggatcgctgcgagcatccttggagggacctc
ttcctctgggccgtccttcagaaccggcagcagatggccaactacttctgggccatgggc
cccgaggcggttgccgcggcgctggcgggctgtaagatcctgaaggagatggcgcggctg
gagtccgaggccgagtcggcgcgcagcatgaaggaggccaagtacgagcagttcgccctc
gatgtcttcggggagtgctactccaacagcgaggaccgggcgcacgccttgttggtgagg
cggacgcactgctggagcaaatccacggtgctgaacttggccaccgaggccgacgccaag
gccttcttcgcccacgatggagttcaggccctgctcacgaagatctggtggggaaccatg
aggacggacacgtccatctccaagctggtggtggctttcttctgtccgccgctcatctgg
accaacctcatcaagttcagcgatgaggaactcgataaccgtaccagccgcgatcagttt
gtggagctggacagtctggacacggagaaggccttactgctgaccgacgacgacgacccg
ctggactcgtcccccgggggccccgaggcccagagctgtgcgtcggtgtggtggcgcttc
ctgctgcgccgctggcgccgcttctggtgcgcggcggtgacggtgttcctgggcaacgtg
ctcatgtacttcgccttcctcttcctcttcacctacgtgctgctgctggacttccggccg
ccgccgccgctcggccccgggctctatgagatcatgctctacttctgggtcttcacgctg
gtgctggaggagctccgacagagcttcttcacggacgaggagatgagcatcttgaagaag
ttcaaactctacgtggaggacaactggaacaagtgcgacatggtcgccatctcgctcttc
gtcatcggcatttcgtgcaggatggtggactacacgtacgaggcggggcggacggtgctg
gccatcgacttcatggtgttcacgctgcgcctcatccacatcttcgccattcacaagcag
ctgggacccaaaatcatcatcgtggaacgaatgatgaaggacgtgttcttcttcctcttc
ttcctgggcgtgtggatgatcgcgtacggcgtggccacgcaggccctcctccaccccaac
gacccgcgcatcgactgggtgttccgccgggcgctgtaccgcccctacctgcacatcttc
ggccagatccccctggaggaaatagatgccgctcgcatgccccacataaactgcaccaac
gactcggacgagatcatcttgggcctccgcccgccgtgtcccaacgtctacgccaactgg
ctggtcatcctgctgctggtcatcttcctcctcgtcaccaacgtgctgctgctgaacctc
ctcatcgccatgttcagctacaccttccaggtggtgcagggcaacgccgacatcttctgg
aagttccagaggtacaacctgatcgtggagtaccacagccgcccggcgctggccccgccc
ttcatcatcatcagccacctctcccagctgctgctcagcatggtcaagcagccggagccc
aagcaggaggttctggagagggagctgccggagggactggaccagaggatgatcacctgg
gagacggtgcagaaggagaactacctggccaagctggagcgccagcactgggagagcagc
gaggagcgactcaagagcacctcctccaacattgaatatgttttaagggttcagagcctc
ttgagggtcgtcggtgggttcaaggaccaagagaagcgtctgacgtccgtggaggttcag
gtccggtactgcagcgaggtgttgtcctggatggccgagtgcttcgcccggagcactctg
aagtgcgggaaagacgctccgagagctccggtgtctctgagcagcgccacgtcccaaggt
caacccgagagggaagccaagccggaagaggacgaggcccgaccgggtcactcgggatgc
ggagccaacaagagattcacgcacgtcgacgaataa
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