Pseudoliparis swirei (Mariana hadal snailfish): 130192536
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Entry
130192536 CDS
T09868
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130192536
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Other basic domains
RF-X
130192536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
DUF2554
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
130192536
NCBI-ProteinID:
XP_056268567
LinkDB
All DBs
Position
4:complement(10929564..10951791)
Genome browser
AA seq
1451 aa
AA seq
DB search
MLFSPSTPVHDSRPVQPRLAPRPAVMAEEDPEQQPDRGARSPPGLLTGLQGAEASALQLR
IKNSICKSVQSKVENILQDVEKFSDIEKLYLYLKLPSGPTSIIDKSDQSALSSSRTQQMH
AFNWIRHHLEEYPETSLPKQEVYDEYKSFCDNLNYNPLSAADFGKMMKNVFPNMKARRLG
MRGKSKYCYSGLRKRPFVHMPSLPSLDLHKTGDGLQCDVLESPGQLSSIKEEVRFAACDL
VCEWAQKVLKRQFDAVEDLARFLIDSHYISNKSLAALTIVTGTATEAKPSQTVSAFVPTA
EAHSFQPHGTTLSSPSVDAKQQLQRKIQRKQQEQKLYSPLPGEGHVKRADDGVPCASPSP
PSPQPTIGIVVAAVPNPITVQRGRQLLSPSPMGTVEGKMLPINFQMVTQPVQAVKQSPKT
PQSLTASPVGERTVRQRYAQILPKPVAATAITLRSPSTMIIGSSPVKTVLTTCCVSPVSL
VQMTAISLSLNGSNTTTPLANATLRPASAGISGTLFAEDISSSQSMRSTSAFPILAPVAR
FGPTTNTRAIDVEMEVEAIHKYSQMQNPGALVFPQEAMANRAGGAFQRAASVPITQSKGF
LSLENTSSTNRNGNSSNTVRPVENSNNSANNTSALHSTPNTSAVSLLNTSTRPSFGESSS
VIPATEGFLPTKSLRKRSSLSPDLSPIKRAFMHQQPVEGGAGLGYGIRNTVPNLLRPGAP
TRPESAPAAREVETRMISAPFAQVHAPCTSSVRASGFYSVAKTQSSMQRKNTSTVMETCP
SVSHPLIQQQQGHTMSNVHAVPNNHGLQTHSNVSDVRGSAPGSLEGAQQHTYSKSIPVTT
PLDFLNQASSSSQLPMQTDMDYFPFDDDVTQDSIVEELVQMEEQMKLNQQEFGNCVTQGQ
QAAMPDSLVSTNQTMTTYYHATSCRSNPIQTPTPTPTPTSEMIGGVQGFTRESPFSRIAS
TTPVDSALGSSRHTPAGTPHSNCSSTVPPSPVECRNPFAFTPINSNVTGFHDGSTISSSP
VKPMQRPMATHPDKTRLEWMNNSYNSSSNGSLNKSNSGMGILPSYQSLIGDHFQKPHAFA
IPHARHHDSHFGRLTPISPVQQQFANTAKQEGFAVPAPLDNKAANTAASTFRCRSVSPAV
HQRNLCGNTGNLPHIPQSVVSPFHSPVTLEMLNIFANSQTQFGVSSMAQRSHSVPLNILM
QTEVQPPPGQRCNSKNIANVLLSKLDGDHDDTVRGLGINNLPSSYTARMNLTQILESDPD
LSCSDHHLSLMTSDSSTSRCKLQRPDYLIENAINEQMILSAGDSRVQSASREQHRQQAQS
MLLTLCSQQHQEELQQQLDFSSTVKDLLADNGLTAGSQLLDQGSEITTGTADFPCEIRLT
SELSSSINDLNALDTDLLFDPSQQQGQYQHAAAEDELVNDVLFQQITSDTAHSSGLDWLE
SKDHPTVGLIG
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttagcccgagtacgcccgtccacgactcccgcccagtccagcccagactcgcg
ccgaggcccgccgtgatggccgaggaggaccccgagcagcagccggaccgcggggcgagg
agtccgcccggcctgctcaccgggctgcagggcgctgaggccagtgctctgcagctgagg
atcaagaactccatctgcaaatctgttcaatcaaaagtggaaaacattctgcaagatgtg
gagaagttctcagacattgaaaaactctacctctaccttaagttgccttctggtccaacc
agcatcattgataaaagtgaccagagcgccctgtcatcaagccgcactcagcagatgcat
gcgtttaactggatccgccatcatctggaggaatacccagagacatctcttcccaaacag
gaggtctatgatgaatacaagagcttctgtgacaatctaaactacaatccactgagtgct
gcggattttggaaaaatgatgaaaaatgtcttcccgaacatgaaggcgcgtcgacttggc
atgagaggaaaatcaaaatattgctacagtggactgaggaagaggcccttcgtccacatg
ccatctttaccatctctggatctccataaaacaggagatgggctccagtgtgatgtttta
gagtcaccgggccagctgagcagcataaaggaggaagtgcgatttgcagcctgtgacctg
gtgtgcgagtgggcccaaaaggtgctgaaacggcagtttgatgccgtggaagacttggct
cgcttcctaatcgacagccattacatcagcaacaagtctctggcagctctcaccattgtc
accggcacagcaacagaggctaagccttcacagacggtctcagcgttcgtccccactgct
gaggctcactccttccagcctcacggcacgacgctgtcctcaccctccgtcgatgcaaag
cagcagctccagaggaagatccagaggaaacaacaagaacagaagctgtactccccttta
cctggagagggacacgtcaagagggcggatgacggtgtgccttgtgccagcccaagccct
ccgtcacctcagccaactatcggcatcgtggtggctgctgtgccgaaccccatcacggta
caaagaggcaggcagctgttgtcccccagcccaatgggaacagtagagggcaaaatgctg
ccaattaacttccaaatggtgacccagccggtccaggccgtgaaacagagccccaaaacc
ccacaaagtcttacagcaagtccagtgggagaacgcacggttcggcagcgctatgcgcaa
atcctgcccaaacctgtggccgcgactgctatcactttgcgctcgccctccaccatgatc
atcgggagcagccctgtgaagactgtgttgaccacatgttgcgtcagcccagtcagttta
gtccagatgacagccatatcactctcactcaacggcagcaataccaccactcccctcgca
aacgccactctgcgaccggcttccgccggcattagtggtactctgtttgcagaagacatc
agctcaagtcaaagcatgaggagtacttctgcattccccatcctggccccggtggccagg
ttcgggccgactactaacactcgtgccatcgatgttgaaatggaagttgaagctatacat
aaatacagccaaatgcaaaatcctggtgctctagtttttcctcaagaggcaatggcaaat
agggctggaggggctttccagagggctgctagtgttcccataactcagtctaaaggcttc
ttgagtctggagaacacatccagcaccaatcgcaatggaaattcctctaatactgttaga
ccagttgaaaatagcaataatagtgcaaataatacaagcgccttgcactcaactccgaat
accagcgctgtttctttactgaacaccagcacacgaccttcatttggggaaagcagcagt
gtaataccagcaacggaaggtttcctgcccactaagagcctcaggaaacgttccagcctc
agtccagacctttctcccatcaaacgggctttcatgcaccagcagccagtagagggcggc
gctggtcttggatatgggattagaaacacggtccctaacctcctcaggccaggagctcca
actagacctgaaagcgcaccagctgccagagaggtagagacgagaatgatctctgcccca
ttcgctcaagtccacgcaccttgcacttcctccgtcagagccagtggcttctactctgtt
gccaaaacacagagctcaatgcagaggaaaaacacttccactgtaatggaaacttgcccc
tcagtcagtcacccattaattcagcaacaacaggggcacacgatgtctaacgtgcatgcc
gtaccgaataaccacggcctccaaacacattcaaatgtgagtgatgttcggggttcagcc
ccagggagcctggagggagctcaacaacatacctattctaagtctatccctgttacgaca
cccttagactttttgaatcaagcttcatcctcaagccagctcccgatgcagactgatatg
gactacttcccctttgatgatgatgtgactcaggacagcattgtggaggagctggtgcag
atggaggagcagatgaagcttaaccagcaggagtttggaaactgtgttacacagggccaa
caggctgcgatgccagacagcctcgtgtctaccaatcagaccatgaccacctactatcat
gccacaagctgccgcagcaaccccatccagacgccaacacctactccaactcccacatcg
gaaatgatcggaggagtccaaggcttcaccagagagagccccttctcccgcatcgcctcc
acgacaccagtggacagcgcactgggaagcagtcgacacaccccagctggtactccgcac
tccaactgcagcagcactgtgcctcccagtccagtggagtgcaggaacccgtttgcattc
acacccatcaactccaacgtcactggtttccacgacggcagcaccatctccagcagccca
gtcaagcccatgcagagaccgatggcaacccacccagacaagaccaggctggagtggatg
aataacagctacaacagcagcagcaatgggagcttgaacaagtcaaacagtggaatggga
atcctccccagctatcaaagcctgatcggtgaccatttccaaaaaccccacgctttcgcc
atccctcacgcacggcaccacgacagccattttggccgcttgactcccatctcgccggtg
cagcagcagttcgccaacacggccaagcaggagggctttgctgtgccggcccctctggat
aacaaagccgccaacacagccgcctcgacctttcgatgccgcagtgtaagccccgccgtg
catcagaggaacttgtgtggaaacacaggaaaccttccccatatccctcagtcggtcgtg
tctccctttcactctcccgtcacgctagagatgttgaacatcttcgcgaacagccagacg
cagtttggggtgagcagcatggcgcagaggagccattctgtgccgctcaacatcctgatg
cagactgaagtccagcccccgccgggccaacgctgcaacagcaaaaacatcgccaatgtc
cttctgagcaagctggatggggaccatgacgacacggttcgggggctgggcatcaataac
ttaccctccagctacactgcacgcatgaacctcacccagatccttgaatccgaccccgac
ctctcctgcagtgatcaccacctcagcctgatgacctctgactcctccaccagcagatgc
aagttgcagaggccagattacctcatcgaaaatgcaattaatgaacaaatgattctctca
gcaggtgacagccgagtacagtcggcttccagagagcagcatcgacaacaggcccagtcg
atgttgttgacgctgtgctcacagcagcatcaagaagaactgcagcagcagttggatttc
agcagcacggtgaaagacctgctggcagacaacggcctcactgctggcagtcagctcctg
gaccaggggtcggagataactacaggcacagccgatttcccttgtgaaatccgattgaca
tcggagctctccagtagcatcaatgaccttaacgcgttggacacggacctgctgtttgac
cccagccagcagcaaggccaataccagcatgctgctgcagaggacgagttggtgaatgat
gtgctgtttcagcaaattaccagcgacacagcacattcaagtggacttgactggctggaa
agcaaagatcatccaactgttggcttgataggttga
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integrated database retrieval system
