Pseudoliparis swirei (Mariana hadal snailfish): 130192562
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Entry
130192562 CDS
T09868
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130192562 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130192562 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130192562 (itga11a)
04810 Regulation of actin cytoskeleton
130192562 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130192562 (itga11a)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130192562 (itga11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
130192562
NCBI-ProteinID:
XP_056268618
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Position
4:28680839..28726754
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AA seq
1199 aa
AA seq
DB search
MQTCTGKQMEYYCFLLLWICSQNIGFHDCFNIDTKNHRIIKGPKKAQFGYTVQQHVAGGE
TWLLVGAPYEMNGPYQTGDIYKCSLSRRTNGNGCSKLNLGRISLTNVSERKDKMRLGMTL
TSNPKDNSFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVL
DGSNSIYPWYEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKRA
RSINQRGGEETNTALGINVARSQAFKQGGRRGAKKVMIVITDGESHDSPDLQQAIDDSEK
DGITRYAIAVLGYYNRRGINPEAFLSEIKHIASDPDDKHFFNVTDESALKDIVDALGERI
FSLEGTSKNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPPKSS
YTQEFPEELKNHGAYLGYTVTSVVSAKHGRLLVAGAPRFNHTGKVIIFTLKNSGNLTILH
SLKGQQIGSYYGSEIAPLDIDGDGITDNLLVAAPMFFSGGMEKGKVYIYRLTELNRFILE
GSLEIHNGGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRILRKY
KQRIAAADLAPGLLYFGRSIHGTMDMNNDGLVDLAVGSLGAAILLWSRSVVRIYTTVRFE
PSKINIFVKDCQRGGKDVTCMSAIVCFNITGRTAVPPTQEIGIKYNVSIVERRFNPRAVL
DNPHKLQPQNLTIFPGEETCEHIYFHVMETTDYARPIVFSAQVGLQDPSQGPVLDDSWPT
VVRTELPFWNGCDEDDRCIPDLALQSMTDLMTRSHFCAQPVQSRGAFCHHASEGGSDGSL
RVLEGNRRRMVVDVQLENKGENAYNARLNITYTPNLHFSSLIVKDNSDIKIECFVEDRLR
NEKMCNVSAPFMRAKMQVSFRLEFEFSRTVFLEHVRVLLEARSDGEEMSTADNFNDIYYS
LKYEGDLLFTRDSNPTRYDIKSELSLEEPGVIGPPFNFTFQIQNLGYFPVKDLQLNIDIP
EMTKNGNQLLQISDLYIDQREGSRCLPPQHVAQSRASPEDLSRFSRLNRSNTLTLPIRCT
VNVASYRETAVRISGALRIDTLHALKFKILELGTSASVELPSSSPMFLHEERPVRHIILE
IRKEGDYRISNWIIIGSTLGGLLLLALLSLALWKMGFFRRQKRRDEDEQEPNGKVAGER
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttgcaccggcaaacaaatggagtactactgtttcctcctgctctggatctgc
agccagaatataggctttcatgactgcttcaatatcgacacaaagaaccaccggatcatc
aagggcccgaaaaaagcccagttcggatacactgttcagcaacacgtcgctggaggagaa
acgtggttattagtgggagctccgtatgaaatgaacggcccctaccagacaggggatatt
tataaatgttcactgagccgacgaactaatggcaacggctgttccaagctcaacttagga
aggatatctctgaccaacgtatcagaacggaaggacaagatgcggttgggaatgacgctc
acatcgaaccccaaagacaacagctttgtggcctgtgggccgctatggtcctacgagtgc
ggcagctcttactacagcactggcatatgctccagagtcaacgccagctttaagttctcc
aggaccatcgcgcctgcctttcagagatgtgagacctatatggacatagtgatcgttctg
gatggctcaaactccatctacccctggtatgaagtgcaggcttttctcatcaacattctt
cagaagttctatattggaccaggtcaaatacaggtcggagttgttcagtatggcgagaag
gtggtgcacgaattcaaactcagcgactacaaatcggtggaggaagtggtgaaaagagcg
cgcagcatcaaccaacgaggtggggaggagaccaacacggctctgggcatcaacgtcgcg
cgctcacaagctttcaaacaaggaggtcgacgcggcgccaagaaggtgatgatcgtgata
acggacggagagtcacatgactcccctgatctccagcaggccatcgatgacagtgagaag
gatggcatcacccgttatgccatcgctgtacttggctactacaaccggcgtggaatcaac
cctgaggccttcctcagtgagatcaagcacatcgccagcgacccggatgacaagcacttc
ttcaatgtgacggacgagtcggcgctgaaggacattgtggacgcacttggagaacgcatc
ttcagtttggaaggaaccagtaagaatgggacagcgtttggcctccagatgtctcaggct
ggattttctgcacacaacgtcgaggacgggattctggtcggtgcagtcggcgcctacgat
tggaacggagccgtgctgaaggaaacccgacaggggaaggtggtccctcccaagtcctcc
tacacacaggagttccccgaggagctcaaaaaccacggcgcctacttgggttataccgtg
acgtctgtggtgtcggccaaacacggccgtctcctcgtagcgggagctccgcgattcaac
cacacgggcaaagtcatcatcttcactctgaagaactcgggcaacctcaccatcctgcac
tctctcaaaggccagcagatcggctcctactacggcagcgagattgcgcctctggatatc
gatggcgacggcataaccgacaaccttctggtggcagcgcccatgttcttcagtggtggc
atggagaaggggaaggtctatatctacagattgacagagctgaatcgcttcatcctcgag
gggtcgttggaaatacacaacggtggccagaacgctcgctttggctcatcgctcgctccc
gtgccagatctgaacggcgatggcttcaatgacctggtggtgggagccccgctggaagac
gaccacaagggagccatttatgttttcttcagccagcacaacagaatactacgtaaatac
aaacagaggatagcagcagcagatctggctcccggcctgctgtacttcggccgcagtatt
catggcacaatggacatgaacaacgatggtttagtggacctggcagtcggatccctcggt
gctgctattctcctttggtcacggagcgtcgtccggatatacaccaccgtccggtttgag
cccagtaagatcaacatctttgtgaaggactgtcagagaggtggcaaagacgtgacctgc
atgtcggccattgtctgtttcaacatcactggcaggaccgccgttcctcccacacaggaa
attgggatcaaatataatgtctctatcgtggagagacgtttcaatcctcgggccgtactg
gacaacccacacaagctgcagcctcaaaacctgaccatcttccccggggaagagacctgc
gaacacatctacttccacgtcatggagaccacagactacgcacggcccatcgtgttttct
gcacaagtggggctccaagatccatcccaaggacccgtcctagacgacagctggccgact
gtggtgaggactgagctgcccttctggaacggctgcgacgaggacgatcgctgcatcccg
gacctggctctgcagagcatgaccgacctgatgactcgaagtcacttctgtgcgcagccg
gtgcagtctcgtggggctttctgccaccacgccagtgaaggggggagcgacgggtctctg
cgggttctggagggcaacaggaggaggatggtggtggacgtccaactggagaacaaagga
gagaacgcctacaacgctcgcctgaatatcacctacacacccaatttacacttctccagc
ctcatcgtcaaggacaactctgatatcaaaattgagtgtttcgttgaggacagactgagg
aatgagaagatgtgcaacgtcagtgctccgttcatgagggccaaaatgcaggtatcattt
cgtctggagtttgagttcagccgtacggtcttcctcgagcacgtcagggttctcctggag
gccagaagcgatggcgaggagatgagcacagctgataatttcaacgacatctattattca
ctgaaatacgagggagaccttctcttcaccagggattcaaatccgacccgatacgatatc
aaatcggagctgtcactggaggagcccggagtcatcggtcctcctttcaacttcactttc
cagatccagaacctcggctactttcccgtcaaggatctgcagctgaacattgatatccct
gaaatgacgaagaatgggaaccaactcctgcagatatctgacttatatattgaccagagg
gaaggatcacgctgtttaccacctcagcacgtggcgcagagcagggcgtcacccgaggac
ctttcccgcttctcccgcttgaaccggtccaacactctcactctgcccatccgatgcacc
gtcaacgtggcctcctacagagaaactgcagttcgaatctcaggagcgctccgaatagac
accttacatgcactgaagtttaaaatcctggaactgggaaccagtgcatccgtagagctt
ccctcctccagtcccatgtttttacacgaagagaggcctgtcagacatataatattggag
atcaggaaagagggcgattacagaatctcgaactggattatcattggtagcacgctggga
ggactcttattgttagccctgctcagtctcgctctatggaagatgggcttcttccggaga
cagaagcggagggacgaggacgagcaggagcccaacgggaaagtggccggagaacggtaa
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