Pseudoliparis swirei (Mariana hadal snailfish): 130192575
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Entry
130192575 CDS
T09868
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130192575 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130192575 (dmxl2)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130192575 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
130192575 (dmxl2)
RAVE complex
130192575 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_CAF1B_HIR1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
130192575
NCBI-ProteinID:
XP_056268637
LinkDB
All DBs
Position
4:696532..776663
Genome browser
AA seq
2675 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCFSVGSVNDVPFTAYGSGCDVVILAGDFDCVQIIPGAQNGNVQV
GCVECSHLLGRIAASYGNTVCVFEPLSTNPNKRHKQLNYQWQKTGQFFLHAIAYNLVWDP
QGNRILAATERLQLWAPPAADALIEEDDGQLSEDKPLPLLNDWSCVWQCRTAASVHIAKW
SPDGEYIATVGKDDCLLKVWYPTTGWRSAVAVHDPSEERSPPVNFSFVYLAHPRSVSGMS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGPISGDTHSSSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALAAHSELLPSQLGTQDTHTHRHIAHHANALCHF
HISASINPNTDIPLALADSALLAPDVFVVHWLNNKDLSFSSCMELFMLQLRRLSEQQLDP
SAEDPLDPDGSPMKFDFDLDEMSDKASSEQGEEAEPGERSSTKASSPGSGSSLPLPSMLL
ERKMETLITEWNRSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSRIPVAFP
TGDANSLSKNILMYACTLSEGESARAGEQGRALRRVSPSLAASLNPRPGVGPAVMMVSKH
VDGSLNQWAVTFAECSAFSDVMTVTHECRYCGHRFHLNEQACHTVLPLLLTSSHHNALLT
PPPPPAFPPPKGPPSGRKRLRNAATGTFHDPNAIYSELILWRVDHIGPLSCTGGVSELAR
INSLHTSAFSNMAWLPTLVPSSVLGSYCNSASACFVASDGKNLRLYQAVVDARKLLDELS
DPDTSKLVGEVFNIVSQQSTARPGCIIELDAITNQCGATTQLLHVFQEDFILGYKPRPEP
DAFTPAFPCGEDYQPAPFSEKFFLVVIEKDLNGNSVLQMWHLHLQSVQACVDEKSPDFSF
QSRLPVPDRAGNADSSPETSPVGALPRSASTANLQSASKLILGSRLVCSERLDLPPGVEV
TRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCAVEGGAAGDERSYRWEPWALM
NEEKDDDSAVCVSGRPVAVSCSYIGRLAIAFKKPRGGQLPGPGDDFSMHVSIYECESTGG
SEWVLEQTLHLDDFTRASATLDPRVSVDSNLFVYSRSDLYMSRDHSSPNIKHYVHLDWLS
KEDGSHILTVGVGSSILMYGRISGVVNEPTSGEDGVAVITLPLGGSIKQGIRSRWILLRS
VDILSSVDGTPCLPVSLSWVRDGILVVGMDCEMHVYAQWHQDKKPGEEGEGRELSSADIA
GGSCSEGRGRSKSVFEGSAAVDEALRAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMD
LGKVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDG
GRDYTEINSIPPLPLYSLMLADLDTSYKGAEEAGKGPDGGGSQKAGEDQYSDLFQVQAVT
TDDCMTFAVDKPEKKSRVINLSQYGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVAL
ADTVATTSAEVSSSTDQKCTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLS
TCHFAWAFHSEAEEELLNMVPAMQRGDPQWAELRALGVGWWVRNINTLRKIMEKIGKAAF
QRNNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFRNNFSEDRWRKAALKNAFSLLG
KQRFEQSAAFFLLAGSLKDAIEVLLEKMDDLQLAMIVARLYEADSESSSTCRALLHQKVL
GCRPDGTGYHCSRLHADPFLRSIAYWITKDYTRALDTLLERRPKEEHENPDVAVKACNPV
VFSFYNYLRTRPLIIRRHFHADPDGERSGADEINLIERKLFFTTANAHFKVGCPVLALEV
LSKIPKVTKKKKKKKKKKSRSSSTLSSAQTLENGGVEWGGGAGGGGGAGGGGGLDWSQPL
VQLEDEELKLDWEQDKEEEEEEDGLTMKKPDTRADGGPEGGGDPDLQRDDSQGESEVDVI
AEQLKFRACLKILMTELRTLATGFEVDGGELRFQLYSWLEREIAAMHTICNRKVEGEEDE
SEVERWRRRAAAADDDAPERSEAGAYERHQLERRRLQAKQQHAERRKAWLRENQALLRVF
LSYCSLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSASIAATKTV
IANPVLHLSNHIHDILRTVTLMEVTPHPDIVDDRVNALHTLAASLSACLYQALCDSHSYS
SQTEASQFTGMVYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREADQ
PRLNVLLCEGVMAVYLALLIHGLGTHSCNELFRLAAHPLNSRMWAAVFGGGAKLIVKPKR
PEAPPAPPQPAEDGDRYRRRFNMRMLVPGRPMKETPAAPPPLPVERPAYREKFIPPELSM
WDYFMAKPFLPLSDSNALCDSDESGAEDDEDEDDAFLSDTQMTEHCDPDSYSWSLIRLAM
VKLAHHNVKTFLPITGLDFAELPVVSPLSNGVLKTLDHWEQLLLERMDRFDGPPPNYINT
FPTEPGAGGGAAALRHRAMLEADNTPFRTKNHHSFPARRLWHFLVKQEVLKETLIRYIFT
KKRKQSESVENHMERINPGARGPSKVEADLGYPGGKAKIIHKESDIIMAFAINKSNSNEL
VLASTQDVQEVDVSSLVAVQPFTWIGDDFDKESRR
NT seq
8028 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagctgtgaacccgggagactgctgcttctcggtg
gggagcgtgaacgacgtccccttcacggcctacggctccggctgcgacgtcgtgatcttg
gccggcgacttcgactgcgttcagatcatcccgggagcccagaacgggaacgtccaggtg
ggctgtgtggagtgctcccacctgctgggccggatcgctgcgtcctacgggaacacggtc
tgcgtcttcgagcctctctccaccaaccccaacaagcggcacaagcagcttaactatcag
tggcaaaagacggggcagttcttcctccacgccatcgcctacaacctggtgtgggacccc
caagggaaccggatcctcgccgccaccgagcggctgcagctgtgggcgccgccagcggcg
gacgccctgatcgaggaggacgacgggcagctgagcgaggacaagcccctccccctcctc
aacgactggagctgcgtctggcagtgcaggactgcagcgtcagtccacatcgccaagtgg
tctccagacggggagtacattgccaccgtggggaaggatgactgtctgctcaaggtgtgg
taccccaccaccgggtggcgctctgcggtggcggtccacgacccctcggaggagaggtct
ccccccgttaacttctccttcgtttacctggcccacccccgctccgtcagcggcatgtcc
tggaggaagaccagcaagtacatgcccaagggctccgtgtgcaacgtgctgctgacgtcc
tgtgaggacggcgtgtgccgcctgtggtcggagacgctgctgccggaggacagcctgctg
ggggggccgatctccggggacacgcactcctccagctccagcctgccgggcctggcgggc
aacaaggacaagatccagcacgctctggagtcgatccaccacctgaagcacttgcgccgc
ggccggcggcgctcctctgcgctggcggctcacagcgagctgctgccctctcagctcggc
acgcaggacacccacacgcaccggcacatcgcccaccacgccaacgccctgtgccacttc
cacatctccgccagcatcaaccccaacacagacatcccgttggcgctggccgactctgcc
ctgctggcccctgatgtctttgtggtccactggctgaacaacaaggacctgagcttctcg
tcctgcatggagctgttcatgctgcagctgcgccggctgtcggagcagcagctggacccg
agcgccgaggaccccctggaccccgacggctcccccatgaagtttgactttgacctggac
gagatgtccgacaaggcgtcctcggagcagggcgaggaggcggagccgggcgagcggagc
agcaccaaggcctcgtccccggggtccggctccagcctgccgctgccctccatgctgctg
gagaggaagatggagactctgatcacggagtggaaccggagccccgacatgctgttcacc
atccaccccacggacggctccttcctggtctggcacgtcaagtacctggacgagttcaac
cagggcatcttcaggcaggttcaggtgtccttctcctcccgcatcccagtggcgttccct
acaggcgacgccaactccctgagcaagaacatcctgatgtacgcctgcaccctgagcgag
ggggagagcgccagagccggcgagcaaggcagggcgctccgacgcgtctccccgtcgctg
gccgcctccctgaaccctcggccgggcgtcggccccgcggtgatgatggtctccaagcac
gtggacgggtccctgaaccagtgggcggtgaccttcgccgagtgctccgccttctctgac
gtgatgaccgtgacccacgagtgccgctactgcggccaccgcttccacctgaacgagcag
gcgtgccacacggtgctgccgctgctgctgacctcctcgcaccacaacgcgctgctgacc
ccgcccccgcctcccgccttccctcccccaaagggaccccccagcggcaggaagcggctc
cgtaacgcggccaccgggaccttccacgaccccaacgccatctacagcgagctgatcctg
tggcgggtggaccacatcggacccctgtcctgcaccgggggcgtctccgagctggcccgg
atcaactcgctgcacacctcggccttcagcaacatggcctggctgcccacgctcgtgccc
agctccgtgctcggatcgtactgtaacagcgccagcgcctgcttcgtggcgtcggacggg
aagaacctgcgtctgtatcaggccgtggtggacgccaggaagctgctggacgagctgtcg
gaccccgacacctcgaagctggtgggtgaagtgttcaacatcgtgagccagcagtccacg
gcccggccgggctgcatcatcgagctggacgccatcaccaaccagtgtggcgccaccacc
cagctgctgcacgtcttccaggaggacttcatcctgggctacaagcctcggccggagccg
gacgccttcacgccggccttcccgtgtggagaagattaccagccggcgccgttctctgag
aagttcttcctggtggtgattgaaaaggatctcaacgggaactccgtgctgcagatgtgg
cacctgcacctgcagtcggtgcaggcgtgtgtcgacgagaagagccccgacttcagcttc
cagagccggctgccggttcccgaccgcgccgggaacgccgactcgtccccggagacctct
cccgtcggggcgctgcctcgctcggcctccacggccaacctgcagtcggccagcaagctg
atcctcggctcccggctggtgtgcagcgagcggctggacctgccccccggcgtggaggtc
acccgggccacgccctctgcaggtcacctgagctcctcctccatctaccccgtgtgcctg
gcgccgtacctgatcgtcaccacctgctcggactcccgcgtgcggttctggcgctgcgcg
gtggagggcggcgccgccggagacgagcgctcgtaccgctgggagccgtgggcgctgatg
aacgaggagaaggacgacgacagcgccgtgtgcgtgtccggacggcccgtcgccgtgtcc
tgctcctacatcggcaggctggccatcgccttcaagaagccccgggggggacagctgccg
ggccccggggacgacttctccatgcacgtgtccatctacgagtgcgagtccaccggaggc
tccgagtgggttctggagcagacgctgcacctggacgacttcaccagagcctcggccacc
ctggacccccgggtcagcgtggactccaacctctttgtgtacagcaggtctgacctgtac
atgagcagagaccacagctcccccaacatcaagcactacgtccacctggactggctctcc
aaggaggacggctctcacatcctcacggtgggcgtcggctccagcatcctgatgtacgga
cgcatctccggcgtggtcaacgagccgaccagcggcgaggacggggtggccgtcatcacg
ctgcccctagggggcagcatcaagcagggcatccgctcgcgctggatcctgctgcgctcc
gtggacatcctgtcctccgtggacggcacgccgtgcctgccggtctcgctgtcctgggtg
cgggacggcatcctggtggtgggcatggactgcgagatgcacgtgtacgcccagtggcac
caggacaagaagcccggggaggagggggaggggcgcgagctctcctccgccgacatcgcc
ggaggctcctgctcggagggcagaggtcgctctaagagcgtgtttgaagggagcgcggcg
gtggacgaggccctcagggccccggccggcctccaggagggggggctgttcgaagcggcc
cactctctgtctcccacgctgccccagtaccaccccacccagctgctggagctcatggac
ctgggcaaggtgcgccgggccaaggccatcctcgctcacctggtgaagtgcatcgccggg
gaggtcgccgtggtgagggacgtggaggccggagagggcggagccaggagacacctgtcc
cgcaccatcagcgtgacgggcagcacggccaaagacaccatcgtggccgggcgcgacgga
ggccgcgactacacggagatcaactccatccccccgctgccgctctactccctcatgctg
gccgacctggacacgtcctacaagggggcggaggaggccggcaaggggcccgacgggggc
ggctcccagaaggccggagaggaccagtactccgacctcttccaggtccaagccgtcacc
acagacgactgcatgacctttgccgtggacaaaccagagaagaagtctcgcgtcatcaac
ctctctcagtacggacccacctacttcggcccggagcacgctcaggtgttgtccagccac
ctgatgcactccagcctcccaggactcaccagactggagcagatgttcctggtggctttg
gccgacaccgtggccaccaccagcgccgaggtctccagctccaccgaccagaagtgcaca
ggtggagaggcccttgatgagtgtggcctgaggtacctgctggccatgcgtctgcacacc
tgtctgctcacctctctgccgccgctgtaccgcatgcagctgctgcaccagggcctctcc
acgtgccacttcgcctgggccttccactcggaggccgaggaggagctgctgaacatggtc
ccggccatgcagcgcggcgacccccagtgggcggagctccgggccctgggggtcggctgg
tgggtccgcaacatcaacacgctgaggaagatcatggagaagatcggtaaggctgcgttc
cagaggaacaacgaccctctggacgccgctctgttctacttggccatgaagaagaaagcc
gtcctgtgggggctgttcaggtcccagcacgatgagaagatgactcagttcttcaggaac
aacttctctgaggaccgctggaggaaagccgctctgaagaacgccttctctctgctgggg
aagcagcgcttcgagcagtcggccgccttcttcctattggccggctccctcaaagacgcc
atcgaggtgctgctggagaagatggatgacctccagctggccatgatcgtggcgcggctg
tacgaggccgactctgagagctcctccacctgccgggcgctgctccaccagaaggttctg
ggctgccggccggacggcaccgggtaccactgctcccggctgcacgccgacccgttcctc
cgcagcatcgcctactggatcaccaaggactacacgcgggcgctggacacgctgctggag
cggcgccccaaggaggagcacgagaacccggacgtggccgtgaaggcgtgtaacccggtg
gtgttcagcttctacaactacctgaggacacgccccctgatcatccgccgccacttccac
gccgacccggacggcgagaggagcggcgccgacgagatcaacctcatcgagaggaagctg
ttcttcaccacggccaacgcccacttcaaggtgggctgcccggttctggctctggaggtt
ctctccaagatccccaaagtgacgaagaagaagaagaagaagaagaagaagaagagtcgc
tcgtcctccaccctgagctccgcccagacgctggagaacggaggcgtggaatggggcggc
ggcgccggtggagggggcggcgccggtggagggggcgggctggactggagccagccgctg
gtccagctggaggacgaggagctgaagctggactgggaacaggacaaggaggaggaggag
gaggaagatggcctgaccatgaagaaaccagacaccagagcagacggaggccccgagggg
gggggggaccccgacctgcagagagacgactcgcagggtgagtctgaggtggacgtgatc
gcggagcagctgaagttccgggcgtgtctgaagatcctgatgacggagctgcggacgctg
gccacgggcttcgaggtggacgggggggagctccgcttccagctgtacagctggctggag
cgggagatcgccgccatgcacaccatctgcaaccgcaaggtggagggcgaggaggacgag
tccgaggtggagcgctggcggcggcgagcggcggcggcggacgacgacgccccggagcgc
tcggaggccggcgcctacgagcgccaccagctggagcggcgccggctgcaggccaagcag
cagcacgccgagaggcgcaaggcgtggctgagggagaaccaggcgctgctgcgcgtgttc
ctgtcctactgcagcctgcacggcgccaaggggggcggagtcacctccgtgcgcatggag
ctgctgttcctgctgcaggagagccagcaggagacgacggtgaagcagctgcagtccccc
ctgccgctgcccaccacgctgccgctgctgtcggcctccatcgccgccaccaagaccgtc
atcgccaacccggtgctgcacctcagcaaccacatccacgacatcctgcgcaccgtcacg
ctgatggaggtcacgccgcaccccgacatcgtggacgaccgggtgaacgctctgcacacc
ctggcggcgtctctgtctgcgtgcctctaccaggctctgtgcgacagccacagctacagc
agccagacggaggccagccagttcacggggatggtgtaccagggcctgctgctcagcgag
aggaagcggctccgcaccgagagcatcgaggaacacgtgacccccaactcggcgccggcg
cagtggccaggcgtgtcctccctcatctcgctgctgacgtcggcgcgggaggcggaccag
ccccggctcaacgtgctgctgtgcgagggcgtcatggcggtttacctggcgctgctcatc
cacggcctcggcacccacagctgcaacgagctcttccgcctggcggcgcacccgctcaac
agccgcatgtgggccgccgtgttcgggggcggggccaaactcatcgtcaagccaaagagg
cccgaggccccaccagccccccctcagccagcggaggacggggaccggtaccgccgccgg
ttcaacatgaggatgctggttcccgggcgcccgatgaaggagacgccggccgcccccccc
cctctgcccgtggagaggccggcctacagggagaagttcatccccccggagctcagcatg
tgggactacttcatggccaagcccttcctcccgctgtcggacagcaacgctctgtgtgac
tctgatgaaagtggcgcagaggacgatgaagacgaggatgacgccttcctctcggacacg
cagatgacggagcactgcgatcccgactcctacagctggtctctgatccgcctggcgatg
gtgaagctggcgcaccacaacgtgaagaccttcctccccatcaccggcctcgacttcgcc
gagctgccggtcgtgtcgccgctcagcaacggcgttctgaagacgctggaccactgggag
cagctgctgctggagaggatggaccggttcgacgggccgccgcccaactacatcaacacc
ttccccaccgaaccgggcgcgggggggggggcggccgcgctgcggcaccgcgccatgctg
gaggccgacaacacgcccttcaggaccaagaaccatcattcctttcccgcccggcgtctt
tggcacttcctggtgaaacaggaagttcttaaggaaactttgatccgttacatcttcacc
aagaaaaggaagcagagtgagtctgtagagaaccacatggagcgtataaacccaggagct
agaggtccctctaaggtggaggccgatctgggctaccccggaggaaaggctaagatcatc
cacaaggagtctgacatcatcatggccttcgccatcaacaagtctaactccaatgagctg
gtgttggcctccactcaagacgtccaggaggtggacgtttcctctctggtggccgtgcag
ccgttcacctggataggagacgacttcgacaaggagtcaaggaggtga
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integrated database retrieval system
