Pseudoliparis swirei (Mariana hadal snailfish): 130192624
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Entry
130192624 CDS
T09868
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130192624 (irx3a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130192624 (irx3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
130192624
NCBI-ProteinID:
XP_056268692
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All DBs
Position
4:2920574..2924169
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AA seq
437 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGIAGNAARAAAGTELSPSGALSNVLSSMYGSPFAAAAQGY
GAFLPYSNDISIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRE
STSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
RTDEEGNVYGSDHEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHSDIKLDGRSD
SEISDGYEDLQGPDQRFLKAVQGKEGKDAERGGELFHHHHHHHSSLDSKAAQGNGEPLKL
NPVSVSSPPSENHPAPPAQKPKIWSLAETATAPDNPRKSPQMNGGGGGGHSAAGGGHAAA
QTIMAPHRLISTCPVGKIHQNWTNRAFSAHQLALLNSNHYLGLANQATATGLALYSSSRH
AEDKSHSSETSGTCPRH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgccag
gggatcgccggcaacgccgcccgggccgccgccgggaccgagctcagtccgtcgggcgcg
ctctccaacgtgctctcctccatgtacgggtctccgttcgcggcggcggcgcagggctac
ggagcgtttctgccctactcgaacgacatatccattttcaatcaattgggtgctcagtat
gaactcaaagacagccccggggtgcagcacccaggcttcgcccaccaccaccctgcgttc
tacccatacggccaatatcagttcggcgacccatccagacccaaaaacgccaccagggag
agcaccagcaccctgaaggcctggctcagcgagcaccgcaagaacccgtaccccaccaag
ggggagaagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctgg
ttcgccaacgcgcggcggcggctcaagaaggagaacaagatgacctgggccccgcggaac
cgcaccgacgaagaggggaatgtttacggcagcgatcacgagggggaggagggggacaag
agggaggacgaggaggagatcgacctggagaacatcgacacggaaaatattgagaacaag
gacgacttggacgaccaggacgacctgcactccgacattaaactcgacgggcggagcgac
tcggagatttcggacggctatgaggatttacaagggcccgaccagaggtttctcaaggcg
gtgcaggggaaagagggcaaggacgcggagcggggaggagagctcttccaccaccaccac
catcaccactcgtctttggacagcaaggcggcgcagggcaacggcgagccgctcaaactt
aacccggtgtccgtgagctcgccgccctcggagaaccacccggcccccccggcccagaag
ccaaagatctggtccctggcggagacggccacggccccggacaacccgcgcaagtcgccg
caaatgaacggcggcggcggcggcgggcactcggcggcgggaggggggcacgcggcggcg
cagaccatcatggccccgcacagactcatctcgacgtgtcccgttgggaaaatccaccag
aactggacgaaccgagccttctcggcgcaccagctggctttactgaactccaaccactac
ctgggactggccaaccaggccaccgccaccggcctggccctctacagcagcagcaggcac
gcggaggacaagagccatagttcagagacttcaggtacatgtccccgacactga
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