Pseudoliparis swirei (Mariana hadal snailfish): 130192633
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Entry
130192633 CDS
T09868
Symbol
tjp1a
Name
(RefSeq) tight junction protein ZO-1
KO
K05701
tight junction protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
pswi04517
IgSF CAM signaling
pswi04520
Adherens junction
pswi04530
Tight junction
pswi04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130192633 (tjp1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130192633 (tjp1a)
04530 Tight junction
130192633 (tjp1a)
04540 Gap junction
130192633 (tjp1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130192633 (tjp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130192633 (tjp1a)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130192633 (tjp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZU5
PDZ
PDZ_6
Guanylate_kin
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130192633
NCBI-ProteinID:
XP_056268707
LinkDB
All DBs
Position
4:14022071..14114748
Genome browser
AA seq
1555 aa
AA seq
DB search
MKYQKYITVMQMAMGVTASNKDCLPTKRQMWVTPQDEETSPSDDPGYSNDSTSTTGGAGA
MEMPATFTLSLPMSQGKPSLRRIKGRIHRSKSLDSMDLLDSNSAAMEETVIWEQHTVTLH
RAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGLLQENDRVVMVNAVSMDNVE
HAYAVQQLRKSGKNAKITIRRKKKVQIPVSRPGDRETMSEHEEEDSDEDDGYEHHSGHDS
QSANAGASGGTGTGRRHERERSSSGRRDRSASRERSVSPRSDRRSQASSAAPRPAKVTLV
KSRKNEVEYGLRLASHIFVKDISPESLAARDGNIQEGDVVLKINGTVTENLSLIDAKKLI
ERSKGKLKMVVQRDDRATLLNIPDLDDSIPSANNSDRDDISDIHSLTSDHSNRSHGRGSR
SRSPEPSDLPRHSPRQISNGRASRPKSLRNRAQTPTPLTGPRLATIHPLRMPPGRFVTAL
AALRADPEQTLGLPSSGGYLPPSSSNSVHLSSLGSEPRDAGTNQKSSGIIRLHTIKQIID
RDKHAVLDITPNAVDRLNYAQWYPIVVFLNPDTKQGVKTMRTRLCSESRKSARKLFERAL
KLRKNNHHLFTTTINLNNMNDGWFGALKDTIQQQQNQLVWVSEGKADGAAEDDLDIHDDR
LSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDDVGPPAEPAITRSSE
PVREDPPVIQEPTGYASYPHTVQPDPLNRIDPAGFKAPVPQQKAEAAVPSVPQQPEPLAE
TMPPAVDVTVITVRGLSPDEAPAAPRSQPSPNPEAGSLRRPTPELAPQSVTPEPLQSGLA
SSEPKMFQKDPYSVDNPGRSNHSMKPVTYNPQQGYHPDQQPYRDYDHPPSRYDVSSSGVS
SGAGYPEPKHRNYDSNMAYENSVPHYDQQQWNPYSQPLSTANSQGYDPRLPYSDGPDSQY
TPPLRYDEPPPQQGFDGRPRYGKPTGPAPVRYDDPPPSVRYDDPPPSVRYDDPPPSVRYD
DPPAPASEADLHYNQDSHLSTYPSAGHSPDPAAQRPAYHQGPTAQQKSSKPQQYDPVPVN
SETSPTPPPKAEALSPPPAEALPARSEPQEDPALRHQSVLTRVKMFENKRSVSVDRARDA
GDPPVNKAADLPLKAGGVIPKANSLSNLDQEKTFRAPGPQQPPSQVADDIVRSNHYDPDE
DEDYYRKQLSYFDRLQTGPTKPQPQAQTTNNYPRMESVEKPIPVEKKYEPVPQMMPSLPP
AILPKPAPEAKPPGRDDTVQTNFLPQKNFPEKSPVNGTSDHPPKAALPATSYNRYAPKPY
TTSAKPFARMFDSPKFNHNLLPNEKPDAAPKAQSFSPVRPPIAAQPQNTDPDSGLDTFTR
TMDHRSKHQHNNINAVPKAIPVSPSALDDDEDEDEGHTVVATARGIFNSNGGVLSSIETG
VSIIIPQGAIPESVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVEL
RLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKALPGDPNYLVGANCVSVLIDHF
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccagaaatatatcacggtgatgcagatggccatgggagtgacagcctccaac
aaagactgcctccccactaagagacaaatgtgggtaaccccccaagatgaagaaacatcg
ccctcagatgatcccgggtattcaaatgattctacaagtactaccggtggcgctggtgct
atggaaatgcctgccaccttcaccctctcgttgcccatgagccagggtaaaccttccctg
cgtcgcatcaaaggccgcattcaccgcagcaagagcctggacagcatggatctgctcgac
tccaacagtgcagcgatggaggagacggtgatatgggaacagcacacagtgacccttcac
agggcgccaggatttgggtttggcattgccatctcaggtgggcgagacaaccctcatttc
cagagtggggagacgtccattgtgatatctgatgtgctgaaaggaggtcctgcagaagga
ctgttacaagaaaacgaccgagtggtgatggtcaatgccgtgtcgatggacaacgtagag
catgcctacgcagtgcagcagctcagaaagagtggcaaaaatgcaaagataactattcgt
cgtaaaaaaaaagtgcagatccccgtttctcgacccggggacagggagacgatgtctgag
catgaggaagaggacagtgatgaggatgatggctatgagcaccacagtgggcatgacagc
caaagtgccaatgcaggagcaagcggcggcacgggcaccggcaggcggcacgagcgtgag
cgtagcagcagcggcaggagggaccgcagtgcctcgcgggagaggagcgtctcaccgcgc
tctgatcgccggtcacaagcctcctctgctgcaccaaggcctgccaaggtcaccctggtc
aagtctcgcaaaaatgaagtagaatatggactgcggttggccagccacatcttcgttaag
gacatctctcctgagagccttgctgccagagatggaaacatccaggagggagacgttgtg
ctgaagatcaatggcacagtcacagagaacctatcactaatagatgccaagaagctgatc
gagaggtcaaagggcaagttgaagatggtggtgcagagagatgaccgtgcgacgctgctc
aacattcccgaccttgatgacagcatcccatcagccaataactcggacagagacgacatt
tcagatatacattcactgacatccgaccattccaatcgatcccacgggcgagggagtcga
tcacgttcgcctgaaccatcagaccttccccgtcactcacctcggcagatcagcaacggc
agggcctcccgccccaagtccctccggaaccgagcccaaaccccaacccccctcactggc
ccccggcttgcaaccattcaccccctgcggatgcctcccgggcgctttgttacagccctg
gccgccctcagagcagatcccgaacagacccttggcctcccatcatccggcgggtaccta
cctccctcaagtagtaactctgtacatttgtcttctctagggagtgaacccagggatgca
ggaaccaaccagaagagctccggcatcattcgcctgcacaccatcaaacagataattgac
cgggacaagcatgccgtgctggacatcaccccgaatgcagtggaccgtctgaactacgct
cagtggtatcccatcgtggtgtttctcaacccagacacaaagcagggtgtgaagacgatg
aggacccgcctctgctctgagtccaggaagagtgccaggaagctttttgaacgagccctc
aaattaaggaagaacaaccaccacctcttcaccacaactattaacttgaacaacatgaac
gatggttggtttggagcgctgaaggacacaatccagcagcagcagaaccagctggtgtgg
gtttcagagggcaaggctgatggggcagccgaggatgacttggacatccacgacgaccgg
ctgtcgtacctgtcggcaccaggcagtgagtattccatgtatagcaccgacagccgccac
acctccgactacgaggacacggacacggagggcggcgcctacaccgaccaggagctggac
gaaacgctgaatgacgacgtgggtccacccgcggagccggccatcacccgctcctccgag
ccggttcgtgaggacccgcctgtcatccaggagcccactggctacgctagctaccctcac
acagtgcagccggaccccctgaaccgcatcgacccggctggattcaaggcacccgttccg
cagcagaaagcagaggccgccgtccctagcgtcccccagcagcctgagcccttggctgag
acaatgccccctgctgtcgacgtaactgtaataactgtcaggggtctgagccctgacgag
gctcctgcagctcctcgcagccagcccagccccaacccagaggctggctcgcttaggagg
cccacccctgagctagctcctcagagcgtcacaccagaacctctgcaatctggactggcc
agttcagaaccaaagatgtttcagaaggatccatacagcgtagacaacccggggagaagc
aatcacagcatgaagcctgtgacttacaaccctcagcagggatatcaccctgaccagcag
ccatacagagattatgaccacccacccagccggtatgatgtcagcagcagtggggtgagc
agcggagctggttacccagaaccaaagcacagaaactatgactctaacatggcctacgag
aacagtgtgcctcattacgatcagcagcagtggaacccctacagccaaccactctctact
gccaactcccagggctacgacccccgtttgccatacagtgacggccctgactcccagtac
acccctcctctccgctacgacgagcccccacctcagcagggattcgacgggcggcctcgc
tacggcaaaccaacgggtccagctccggtccgctatgatgatcctccaccttctgtccgc
tatgatgatcctccaccttctgtccgctatgatgatcctccaccttctgtccgctatgat
gatcctccagctcctgcttcagaggcggacctgcattacaaccaggattctcacctgagc
acgtacccttcagctggccactccccagacccggctgcccagcggcctgcgtatcaccag
ggaccaacggcgcaacaaaagagctccaagcctcagcagtacgaccctgtacctgtgaac
tctgaaaccagccccacaccgcctcccaaagcagaagccctgtcaccgcctcctgcggag
gctctccccgccaggagcgagccacaggaagaccccgccctgcggcatcagtctgtcctg
acgagagtcaagatgtttgagaacaagcgctctgtgtccgtggacagagccagagatgca
ggggatccacctgtgaacaaggcagcggatttacctttgaaagcaggcggagtaattccg
aaagcaaattccctgagcaacctggaccaagagaagaccttcagagccccggggcctcag
cagcctccgtcccaggtagctgatgacattgtgcgctccaaccattacgaccctgatgag
gacgaggactactacaggaaacagctgtcttactttgacaggctccagaccggtcctacc
aaaccccagccacaagcacaaacgactaacaactaccccaggatggagtcagtggagaaa
cccattcctgtggagaaaaaatatgaaccggttccccagatgatgccttctctgccacca
gccatactgcccaaacctgcacctgaagccaaacctcctggccgagacgacactgtccag
accaacttcctgcctcagaagaatttccctgagaagtctccagtaaacgggacgagtgat
catcctccaaaagcagctctgccagcaaccagctacaaccgctacgcacccaagccctac
accacgtcagccaagccttttgcacgcatgttcgacagtcctaaattcaaccacaacctt
ctgcccaatgaaaagcctgatgctgctccaaaggcccagagcttcagcccagtgaggcct
ccgatagccgctcagccccagaacacagaccccgacagtggcctggacacgttcacacgc
acgatggaccaccgctccaaacaccagcacaacaacatcaacgctgtgcccaaggccatc
cctgtgagtcctagtgccctggatgatgatgaggatgaagatgagggccacacagtggtg
gcaacagctcgaggtatcttcaactctaacggtggcgtcctgagctccattgagacaggg
gtcagcattataatcccccagggtgccatccctgaaagcgtggagcaggagatctacttc
aaggtctgcagagacaacagcatcctgccgccactcgacaaggagaaaggagagactctg
ctcagccctttggtgatgtgtggacctcacggcctcaagtttttgaagccagtggagctg
cgcttacctcactgtgcgtctatgacccctgatggttggtcttttgctctaaaatcctcc
gactcctcgtcgggtgacccaaaaagctggcagaacaaggctctccccggagaccccaac
tacctggtgggagccaactgtgtttctgtgctcattgaccacttttaa
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integrated database retrieval system
