Pseudoliparis swirei (Mariana hadal snailfish): 130192756
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Entry
130192756 CDS
T09868
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130192756 (cilp)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
130192756 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
Ig_2
TSP_1
I-set
CarboxypepD_reg
CarbopepD_reg_2
Ig_5
ig
Ig_4
V-set
TSP1_CFP_C
Prok-E2_C
Motif
Other DBs
NCBI-GeneID:
130192756
NCBI-ProteinID:
XP_056268865
LinkDB
All DBs
Position
4:complement(14250332..14256707)
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AA seq
1158 aa
AA seq
DB search
MGRTERRVRMSVRPLLLLLLTLGITTAFDVTAKDNYEWTTWFNVDHPGGLGDYEQLEAIR
FYYRARVCKTPRAIEARTSEWVPARETGETVHADPAIGFWCLNEEQGPERNCSNYAVRFL
CSKDNMNTEGNWDPWSDWNPCSALCGQVGVQVRSRNCQSHWMPCSGPKVEAKACSGPECH
KTDCSRQCVMGKVNAECDACMCEEHILLGSVRGAGGLTAEGATLLRSGKLLTLTDHNGHF
RIPGVCPDGNTTLTVTLKGHAPLSVVVPHSAERTSVVSVQLKRTEKLHVLGHPESKVRRK
GHTAAFCCKVAGTPQPDKYQWFHNNSLLEKQSESTLVLKNLHPEQSGQYYCRASGPSGAI
KTKPATLKVLGRDEHSCNPKPESHLIRLPRDCHQNSTDSFYYDVGKCPSIACAGQLDKGI
RCKDKVAYCCGVKKMEKKQLTCQGYQLPTMVVTECGCQKRVETKAIVHGRAIAADNGEPM
RFGHVFMNGVRISRTGYKGTFSIQVPPDTERLVLTFVDNMHKFVNTTKVLPFNTKGGAVY
HEIKLLRKKLPVTISPRETNTLELGEVEGQEAMVQIQIPPNAFYTEKGEVFTGNVNASVT
FLDPRDVSTAAAAQSDLNFVGDEGDTMPLRTYGMFSVDFRGEENNEPLNVGEVKVFLDSA
QVKMSAHLNTMKLWSLNPDTGLWEEEGSLQVEKKRRGKREERTFLIGNMEIRERRLFNLD
VPENRRCYVKVRTFRSERFMPSEQVEGVVVSLINMEPTAGYSSNPRAWGRFDSVVTGSSG
ACLPAFCDEQKADAYSAYVMANLGGEELEAVSSAHKLNPNLIGVPQPYLSKLNYRRTDHE
DPRLKTTAFSINVAKPSANTAEESNGPVYTFENLKECEEAPFSAAHFRFSRVEGDGYDYN
TVPFNEDDPMSWTQDYLTWWPKPMEYRACYIKVKMNSPHEINVRSRNMGGTHPKTVGQLY
GLRDTRSIRDMAQATLSAVCLEFKCSGMLYDQQRVDRTLVRVIPQGSCRRDQVNTILQEY
LVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEMALGRCFDGTSDSTSR
VMKSNEGVALTFTCGDRESTSQTSVFQARQGSQGQAVTSVVRGEGRQNRRRQRANAPRSS
SSRRSTRNPAGRRTKARS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggacagagcggcgagtgagaatgtcagtgaggcctcttcttcttcttcttctc
accctcggaatcacgaccgcctttgatgttacagctaaagacaactatgagtggaccaca
tggttcaacgtcgaccaccctggaggcctgggagactatgagcagctggaggccatccgc
ttctactaccgtgcccgagtgtgtaagactcccagggcaatcgaagccagaacctctgaa
tgggtcccagcccgtgaaactggggagacggtccatgccgatcccgccatcggcttctgg
tgccttaacgaggagcagggtcctgaacgcaactgctccaactatgcagtccgtttcctc
tgttccaaagataatatgaatactgagggtaactgggatccatggtcggactggaaccca
tgctctgccctctgtggtcaggtgggggtccaagtgcgctccagaaactgtcagtcacac
tggatgccttgcagtggacctaaagtggaagcgaaagcatgcagtggaccagaatgccac
aaaacagattgctcccggcagtgtgtgatggggaaggtaaatgcagaatgtgacgcatgc
atgtgtgaggaacacatccttctgggttctgttcgtggtgcggggggtctcactgctgaa
ggggctactctcctacgctctggcaagctccttacccttaccgaccacaacgggcatttc
cgcatccccggtgtctgccctgatggcaacacgaccctgacagtcaccctgaagggccac
gccccccttagtgttgttgtgccccacagtgctgaacgtacctctgtcgtcagcgtccag
ttgaaaagaacagagaagctccatgtgctgggacaccctgagagcaaggtcaggaggaaa
ggacacactgctgccttctgctgcaaagtggctggaacacctcaaccagacaagtaccaa
tggtttcataacaacagtctccttgagaagcagtccgagagcaccttggtcctaaagaat
ctgcaccctgagcagagtgggcagtactactgcagagcgagtggtccttctggggctatt
aagaccaagccagctacactcaaagtcttaggtagagatgagcattcatgtaacccgaag
cctgaatcccacctcatccgtcttccacgtgactgccaccaaaacagcacagactccttt
tactacgatgtgggcaagtgcccctcaattgcatgtgctggacagctggacaaaggcatc
aggtgcaaagacaaagtggcttactgctgtggtgtcaaaaagatggagaagaagcagcta
acatgccagggctaccaactgcccaccatggtggtgactgagtgcggctgccagaaacgt
gtggagaccaaggccattgtgcacggtagggccattgctgcagacaatggtgagccaatg
aggtttggccatgtctttatgaatggagtccgaatcagccgcacaggctacaaaggtaca
ttctccatccaggttcctccagacacagagaggctagtcctgacttttgtcgacaacatg
cataaatttgtcaacaccacaaaagtacttccatttaacaccaaaggaggggctgtctac
catgagatcaaacttctaagaaagaaacttcctgtgaccatcagcccaagagaaaccaac
actctggagcttggggaggtagagggccaggaggcaatggttcaaatccagattcctccc
aatgccttctatacagagaaaggagaagtcttcactggtaatgtgaatgcgagcgtcacg
tttctagaccccagagacgtctccaccgctgccgcagctcaaagtgatctcaactttgtc
ggcgacgaaggagataccatgccgctgagaacctacgggatgttctcagttgactttagg
ggtgaagaaaacaacgagccgctaaacgtgggagaagtgaaggtgttcctagattctgcc
caggtgaagatgtctgcgcaccttaacaccatgaagctgtggtcactgaaccctgatacg
ggcctgtgggaggaagaaggaagtctgcaggtggagaagaaaagaagaggaaaaagggag
gagagaacctttctgattggtaacatggagatcagagagaggcgtctttttaacctggac
gtcccagagaaccgcaggtgttacgtgaaagtgaggaccttccgcagtgaacgcttcatg
cccagtgaacaggtggagggagttgtggtgagccttataaacatggagcccacagctggc
tactcctcgaacccacgtgcctggggccgtttcgatagtgtcgtcactggctccagcggt
gcctgtcttcctgctttttgcgacgaacaaaaagcggatgcctactctgcgtacgtcatg
gccaacctcggaggagaggagctggaggccgtctcttctgctcacaaactcaatcccaac
ttaattggagtgccccagccttacctgagtaagctgaactacaggcggacggaccacgag
gacccgagattgaagaccactgcgttcagcatcaacgtggcgaaaccaagtgccaacacg
gcagaggaaagcaacgggccagtgtacacatttgagaacttgaaggaatgcgaggaggcc
ccgttcagtgcagcccacttccgcttctcgagagtagaaggagacggctacgattacaac
acggtcccgttcaatgaagatgacccaatgagctggacacaggactatctgacgtggtgg
cccaagcccatggaataccgggcctgttacatcaaagtgaaaatgaacagcccacacgag
atcaacgtgcgctcccgtaacatgggcggaacccacccgaagacggtaggccagctgtac
ggcctccgagacactcgcagcatccgcgacatggcccaggcgaccctttcagccgtgtgc
ctggagttcaagtgcagcggcatgctgtatgatcagcaacgtgtcgaccgcaccctggtg
agggtgattccacaaggaagctgtagacgagatcaggtcaacacaatcctccaggagtat
ctggtcaaccatctgcccctcgccgtcaacaacgacaccaacgagttcaccatgctcgca
cctctcgaccccctgggccacaactacggaatttatacagtgaccgaccaggatccccgc
acggccaaagagatggccctgggacgctgcttcgatggcacttccgacagtacatctcgt
gtcatgaagagcaatgagggcgtcgcgctgacgttcacctgtggagatcgcgagtcaaca
agccagacgagtgtcttccaggcccgacagggttctcaaggtcaagcagtaacaagcgtg
gtgagaggagaagggaggcagaaccggcgccgccagagggccaacgcaccgcgcagcagc
agcagcaggcgcagcacaagaaatcctgcaggaaggcgcacaaaggccagaagctga
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integrated database retrieval system
