Pseudoliparis swirei (Mariana hadal snailfish): 130192804
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Entry
130192804 CDS
T09868
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130192804
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130192804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130192804
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130192804
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
PRP38_assoc
RRM_1
Motif
Other DBs
NCBI-GeneID:
130192804
NCBI-ProteinID:
XP_056268944
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Position
4:complement(13781959..13787621)
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AA seq
443 aa
AA seq
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MAARPAAGPSSSQTDIIDLYSDLNQNDEDLDRIAEANELFDAVLTGSVDLDKKVTPNVMP
PNKTLPNDGPTTVKIPGKYSLRRLSLYIGNFPWWTSDKDITCMAQTLGVKDIKEIKFAEN
KINGQSRGFAEVVVTSEESLKILLEKIPHCELNGDKIDCRFATRHNLGVFEDIANKRIPM
RVNSKDPKESDSSDKIPRLLAQEPSPAPFPQHYPSYPLANRFPSLPGPYLNHPPPPFPHM
PPNIPPPMPPPMFPPHPIHVPSQPPPSLHVNPAFFPPVHDGHNSQAYSQQKNTPRNTDRD
FEDLMNRNKAVASSAISKAVSGATAGDLRVAMETLLTAIAIIKQSRVYGDERCQALVTSL
KDCLVSIQGNQGYRSSSRSGEDERDRDRGRDRERERERDREDSSGWEAAGASRRHRQRSR
SGEREKERSRERERQRDYRDRYR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagacctgcagccggaccaagtagctcccagacggacatcatagatctttac
agtgacctcaatcaaaacgacgaggatttggaccgaattgctgaagcaaatgaacttttt
gatgctgttctaactggctcagttgatctggacaagaaagtcactccaaatgtgatgcct
ccaaacaagacactacctaatgatgggccaacaactgtgaaaataccaggaaaatactct
ctgagaagactgtctttatatattggaaatttcccctggtggacatctgataaggacatc
acgtgcatggctcaaacgttgggtgtgaaggacatcaaagagataaaatttgctgagaac
aaaattaatggccagtctagaggcttcgcagaagtggtggttacctcagaagagtcatta
aaaatattattggaaaaaataccccactgtgagcttaatggggataagatcgactgtcgc
tttgcaactcgccataaccttggtgtgtttgaggacatcgcaaataaacgtatacccatg
cgtgttaattccaaagatccaaaggagtccgattcttcggataagattcccagattatta
gcacaagagcccagtcctgcccccttccctcaacattacccatcatatccacttgcaaac
aggtttccctcattacccggcccttaccttaatcatccacctcctcctttcccacatatg
cctccaaacatccctccccccatgccaccccctatgttccctcctcatccaatccatgtt
cccagccaaccacctcccagtctgcatgtaaatccggcattctttcccccagtacatgac
gggcacaacagccaagcttacagccagcaaaaaaacacacctcgaaatacagatagagat
tttgaggacctgatgaacagaaataaagccgttgccagcagtgccatcagcaaagctgtg
tctggagcaacagctggagacttgcgggttgccatggagactctattaactgccattgcc
atcattaagcagtccagagtgtatggagatgaacgctgccaagccctggtcacctcactg
aaggactgtctggtctctatccagggcaaccaaggctacaggagtagcagtcgttctggg
gaagacgaaagagaccgggacaggggtcgcgacagagagcgtgaaagagaacgtgaccga
gaagattcttctggttgggaagctgcaggagcgtctcgaagacaccgacaacgctccagg
agcggggagagggaaaaggaacgttcccgagaacgggagaggcagagagattacagagac
cgataccgctaa
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