Pseudoliparis swirei (Mariana hadal snailfish): 130192814
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Entry
130192814 CDS
T09868
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130192814 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pswi03051
]
130192814 (psmc3)
Proteasome [BR:
pswi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130192814 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
DUF5827
AAA_33
Mg_chelatase
PhoH
CCDC22_CC
AAA_7
IstB_IS21
AAA_11
AAA_24
AAA_28
ATPase
Sigma54_activat
AAA_14
RNA_helicase
Parvo_NS1
Defensin
Motif
Other DBs
NCBI-GeneID:
130192814
NCBI-ProteinID:
XP_056268959
LinkDB
All DBs
Position
4:7126644..7128457
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AA seq
427 aa
AA seq
DB search
MASPSDKSVWDEVEDGIGEEVLKMSTDEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANVDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFHPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPVPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgagtgacaagtcagtttgggacgaagtggaggatggaatcggcgaagaa
gtattaaaaatgtccacagacgagatagttcagcgaactcgtctgctcgacagcgagatt
aagatcatgaagagcgaagtgcttcgagtgacccacgaacttcaggccatgaaggataaa
atcaaggaaaacacggagaagataaaggtgaacaaaaccctgccgtacctggtgtcaaat
gtgatcgagctgctggatgtggaccccaacgaccaggaggaggacggggctaacgtggat
ctggactctcagaggaaaggaaaatgcgccgtcatcaagacctcgactcgacagacctac
ttcctgcccgtgatcgggctggtggacgccgagaagctgaagcccggagacctggtgggt
gtcaacaaggactcctacctgatcctggagaccttgcccaccgagtatgactccagagtc
aaggccatggaggtggatgagcgccccacggagcagtacagcgacattggagggctggac
aagcagatccaggagctggtcgaggccatcgtcctgcccatgaaccacaaggagaagttt
gaaaacctcggcatccagccacccaaaggagtcctgatgtacggtccacctggcaccggg
aagaccctcctggccagggcctgcgccgctcagaccaaggccaccttcctgaagctggcc
ggtccacagcttgtccagatgtttatcggagatggagccaagttggtgagggatgccttc
gcgctggccaaagagaaagccccttccatcatcttcatcgatgaactggacgccatcggt
accaagaggtttgacagcgagaaggctggagaccgagaagtgcagaggaccatgctggag
ctgctcaaccagctggatggatttcatcccaacatgcaggtcaaggtaattgccgccacc
aacagagtggacatcttggaccctgcgctgctccgttcaggtcgcctggacagaaagatc
gagttccccgtgccgaacgaagaggcccgagctcgcatcatgcagatccactcccgcaag
atgaacgtcagtcccgacgtcaactacgaggagctggctcgctgcaccgacgacttcaac
ggagcccagtgcaaagctgtgtgtgtggaggccggcatgatcgcgctgcgccgcggggcc
acggagctgaaccatgaagattacatggagggcatcctggaggtccaggccaagaagaag
gccaaccttcagtactacgcctga
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