KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130192820
Entry
130192820         CDS       T09868                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03030  DNA replication
pswi03420  Nucleotide excision repair
pswi03430  Mismatch repair
pswi03440  Homologous recombination
pswi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130192820 (rpa3)
   03420 Nucleotide excision repair
    130192820 (rpa3)
   03430 Mismatch repair
    130192820 (rpa3)
   03440 Homologous recombination
    130192820 (rpa3)
   03460 Fanconi anemia pathway
    130192820 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pswi03032]
    130192820 (rpa3)
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130192820 (rpa3)
DNA replication proteins [BR:pswi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    130192820 (rpa3)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     130192820 (rpa3)
   MMR (mismatch excision repair)
     130192820 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     130192820 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 130192820
NCBI-ProteinID: XP_056269004
LinkDB
Position
1:1769311..1770711
AA seq 122 aa
MAGILELPKTRVTCAMLSQYISRPVCFVGRVEKVHPSGKSFTVADGEGKIATVELNDPLE
EELSGIVEVVGTVSNKGAIMAVTYNLLREDRGVPFDLELYAEALKVVHEFPQHYPFQVVA
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaggaatcctggagctccccaaaactcgagtgacctgcgcgatgctgtcgcagtac
atcagcagaccggtctgcttcgtcgggcgcgtggagaaggttcacccgtcggggaaatcc
ttcacggtggcggatggagaaggaaagatagcaacggttgagctgaacgaccctcttgaa
gaagagctgagcggcatcgtggaggtcgtcggcacggtgtccaacaaaggagcgataatg
gccgtcacgtacaacctgctgcgggaggaccggggcgtgcccttcgacctagaactctac
gccgaagccctgaaagtggtccacgagttcccgcagcactacccattccaggtggtggcg
agcggatga

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