Pseudoliparis swirei (Mariana hadal snailfish): 130192824
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Entry
130192824 CDS
T09868
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130192824 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130192824 (rbm26)
03041 Spliceosome [BR:
pswi03041
]
130192824 (rbm26)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130192824 (rbm26)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130192824 (rbm26)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130192824 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
RRM_3
Motif
Other DBs
NCBI-GeneID:
130192824
NCBI-ProteinID:
XP_056268971
LinkDB
All DBs
Position
4:complement(17927340..17939924)
Genome browser
AA seq
1016 aa
AA seq
DB search
MIIENIDALKTWLSETLEPICDADPSALAKYVVALVKKDKTEKELKALCIDQLDVFLQKE
TQAFVDKLFEAINNKNYVPPPDQPSSLIKVEKEEPKKDETNREDEREKKFPRRVNHSPPQ
SSSRYSRDIRRGDDRKRDDRSRKREYDRMQPRRDSYRDRFNRRRGHSRTFSRSRSRSWSK
DHIRDRERERDKERDRDRDRDRDRDRSRSRSPSRTRSRSRSRERDSGKLKFDHDRVDRPE
NADCFTPAVQVPTATTSHFPVPTLSSTITVIAPTHHHSNNTPESWSDFRPEQPVDRGLFN
RGPPPQQRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPNMLPFQPPPIPGGEAPP
PPGPPPPLMNPPPVNLRPPGLPPGSLPPGSLPPSLPPVAGPPPPLPPLQPSGMDAPPNSM
TSSVPTIVTSGMRSSLPQAPVPCFTSDNYETDVYNPEAPSITNTTRPIYRHRVNAQRPNL
IGLTMGEVDQPPRDNILNNSMRIVMESDLRERPPVSHDGGLPLIKPWFDKPNFNKPNHQG
YHTRAPFSPNAKLLVRQIPPELNNISKLNEHFSKFGTIVNLQVAFQNDPEGALIQFASPH
EAKQAMQSTEAVLNNRFIRVHWFRDDGTDGQGQSISQQHPPQQPDLQASDAFLKQSVKDR
LGPLLNANSEPLQDSSVASQQNPSKGSVKDRLGFCKPAAPIEKVFSTSMGLTKTVYNPEA
LKAAQKSSEEAVKKKQEALRLQQDVRKKKQEILEKHIETQKLLISKLEKNKTMKAEDKAK
IMDTLGMLTKSITKLQEEIKGISGSNNQLRTAKTKAQAQKELLDAELDLYKKTQAGEDIA
LLKMKYTQLQIEAARRGILSSGRGRGVHARGRGALRARGRGCRGRGRGVSLHAVVDHRPR
AVDIVGFTEADHVDLLPHFAQFGEIEDCQIDGNNLSAVITFKTRAEAEQAAVHGVRFNNR
TLRLAWHKVVKTLSAADADDAEPEEDEYPEGSLSDDALLQDDDEEEDDNEPRSWRR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaacattgatgccttgaaaacatggctgtctgaaaccctcgagcccatc
tgtgatgcagacccctctgcccttgctaagtatgttgttgctctggtgaagaaagacaaa
actgagaaggaacttaaagccctatgtatagaccagttggatgtatttctccagaaagag
acccaggcatttgtggataagctgtttgaagccattaacaacaaaaactacgtcccgccg
ccagatcaaccatcctctctgatcaaagttgagaaggaagagccgaaaaaagatgagaca
aaccgcgaagacgaacgggagaagaagtttcctcggagggtgaatcacagcccaccccaa
tcaagttctcgttacagcagagatatcaggagaggagatgatcgtaagagagacgaccgc
tccagaaagagggaatatgaccgcatgcaaccacggagggactcgtaccgcgatcgcttc
aaccgcagaagaggccacagtcgcactttcagtcgtagccgcagccgcagttggagcaaa
gatcacatccgagaccgtgagcgagagagggataaggaaagagacagggacagggataga
gatagagatcgagatcgcagcaggagccggtcacccagcagaactcggtctagaagcagg
agtagagaacgagattctggaaagttgaagtttgatcatgatcgagtggacaggccagag
aatgctgattgttttaccccagcagtccaagtccccactgcaaccacttcacatttccct
gtgccaacactgagcagcaccattacagtcattgctcccacacatcatcatagtaacaat
acccctgagagttggtcagacttccgccctgagcaacctgtggatcgtggcctttttaat
agaggacccccccctcaacagaggaagcgatgccgtgactatgatgaaaagggcttctgc
atgagaggggacatgtgtcctttcgaccatggaagtgacccagttgtagtggaggatgtc
aatttgcccaacatgctgcccttccaacctccaccaatcccaggtggagaggcaccaccg
cccccaggccccccaccacctcttatgaacccaccacccgtgaacctgcggccccctgga
ctcccaccaggttctctcccaccaggttctctcccacccagccttccacctgttgcaggt
cctcctcctccacttcctccactgcaaccgtcaggcatggatgctcctcccaattccatg
accagctctgttcccaccatcgtcacctctgggatgcgctcctcacttccccaggcccca
gtgccctgcttcacctctgacaactatgagacagatgtgtataatcctgaggctccgagc
atcaccaataccaccaggccaatctaccgccatcgggtcaatgcccagagaccgaacctg
attggcctcacaatgggggaagtggaccaaccaccaagagacaacatcctgaacaacagc
atgaggatcgttatggaatctgatttgagggagagaccacccgtctctcatgatggaggt
cttcccttgataaaaccttggttcgacaagcccaattttaacaaacccaaccaccagggc
taccacacaagagccccattctccccaaacgccaagctgctggttcgtcaaattcctccc
gagctcaacaacatcagcaaactcaatgagcatttcagcaagtttggcaccattgtcaac
ctacaggtggccttccagaatgacccagaaggggcactgatccagtttgcctccccacac
gaggccaagcaggctatgcaaagcacagaggctgttctcaacaaccgcttcatcagggtg
cactggtttcgtgatgatgggactgatggccagggccagtctatctctcagcagcaccct
ccgcaacagccagacctgcaggcctcagacgcgtttcttaagcagtctgtcaaagatcgc
cttggacccctgctcaatgcaaactctgagccattacaagattccagtgtcgcctctcag
cagaatccctcaaaggggtcggtgaaggaccgtttggggttctgcaaaccagcagctcct
attgaaaaggtgttttctacatcgatgggcctcacaaagactgtatacaatcctgaagcc
ttgaaggcagcccagaaaagctcagaggaagctgtgaaaaagaaacaggaagctctaaga
ctacagcaggatgtaagaaaaaagaagcaggaaatattggagaagcacattgagacacag
aagctactgatatctaaacttgagaagaacaaaacaatgaaggcagaggataaagccaag
attatggacactttaggcatgttaaccaagagcatcaccaaacttcaagaggagataaag
ggaatctcaggcagcaacaaccagctacgcacagccaagaccaaggcacaggcacagaag
gaacttctggacgcagagctggacctgtacaagaagacccaggccggagaggacattgct
ttgttgaaaatgaagtacacgcagctgcaaattgaggcagctagaaggggaatcctgtca
tccggaagaggccggggggtccacgctcggggccggggtgctctcagggcccgggggagg
ggctgcagaggacggggaagaggtgtgtcgctgcatgcagtcgtggaccatcggccgaga
gcggtggacatcgttggattcactgaggcagaccatgtggacctgctgccacattttgct
caattcggagagattgaagattgccagattgacggaaacaacctgtctgcggtcatcact
ttcaagacgagagcagaggcggaacaggcggctgttcatggagtgaggttcaacaaccgg
actttgcgtctggcctggcataaagtggtcaagactctcagtgctgcggatgccgatgac
gcagaaccagaggaggatgagtacccagaggggtcgctgagtgacgatgcattgctgcag
gatgatgacgaggaagaagacgacaacgagcctcgctcttggcgcagatga
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