KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130192882
Entry
130192882         CDS       T09868                                 
Symbol
elp2
Name
(RefSeq) elongator complex protein 2 isoform X1
  KO
K11374  elongator complex protein 2
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pswi03016]
    130192882 (elp2)
Transfer RNA biogenesis [BR:pswi03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    130192882 (elp2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_TEP1_C WDR54 WD40_RFWD3 Rax2 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 130192882
NCBI-ProteinID: XP_056269049
LinkDB
Position
1:complement(11041607..11068434)
AA seq 839 aa
MAAPIFETCHVACCANRTPNVVSWSRGGIIAFGTCTSVALYDPQERGVVAVLNGHTGRVN
TVQWVHREDCAPESHLVSGGSDNRLIVWEAQNGKFVQFVECKGHTGPVCAVDAIYVEDSK
ILVASSASDSTVRLWLCNEANEAECLHTLSFGSSFMMDVSLALLPGSRVPILACGGDNAQ
VHLYVQSNGELHKAMSLQGHEDWIRGVAWASLGGELLLASCSQDCLIRVWRLCAKSGTDV
HTEGDHTIIKMKEDVFEVKERDVSSVFAVSLETVLAGHENWVYGVHWQPPFYKGGELQQP
LRLLSASMDKTMILWAPEEGSGVWVEQVRVGEVGGNTLGFYGCQVSPDGSMIVAHAFHGA
LHLWCREQDKEGQWRPGVVLSGHFNAVQDLSWDPEGEFILSVGSDQTTRLFTPWRNQDAK
QVTWHEISRPQIHGYDMQCLAMVGKFQFVSGADEKVLRVFQAPRNFVENFANISGTSKEK
LLASSDSANLPEGASIPALGLSNKAVFQGDLTPKTNKEEGQFNSVSDQYQESYFHPLIMT
EPPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSARTVVASACKASKAEHAAVLLWSTAT
WRQLQTLPCHTLTITQMAFSPDAQLLLAVSRDRTWSLWRRNLPTPESPEPRFSLSAHTGK
DTAVHSRIIWSCDWSPDSKYFVTSSRDKKVMVWGPCRLEDSGDSVLPPEIKPCSSILDVG
DSATAVAFCPVFCSDSSYLLAVGLECGRILLSRWSPGPESAGGQDWSSCGQTDILQSHAL
TVKRLRWRPRPGRAGHQNKTLDGQNDDGSDVEDENSWVQLASASADHSIKIFNVNTRTL
NT seq 2520 nt   +upstreamnt  +downstreamnt
atggcggcgcccatatttgaaacatgccatgtagcatgttgcgcaaacaggactccaaat
gttgtttcttggagtcgtggcgggattattgcctttggaacatgtacctctgtagctctg
tacgacccacaggaaaggggcgttgttgctgtcctgaatggacacacaggcagagtgaat
acagtccagtgggttcacagagaggactgtgctccagagagtcaccttgtctcaggaggc
tcagacaatcggctcatcgtctgggaggctcagaatggaaagtttgtccagtttgtggag
tgcaagggtcacactggtccagtttgtgctgtggatgccatctatgtggaggactcaaag
atcttagtggcctcctcagcatccgattccacagtcagactgtggctctgcaatgaggcc
aatgaagctgagtgcctccataccttatcatttggcagcagtttcatgatggatgtctct
ctggcactgttgccaggcagcagagttcccatactggcctgtggcggcgataacgctcag
gtgcatctgtatgtgcagtctaacggagagctccataaagccatgtcactgcaagggcat
gaagactggattcgtggagtggcctgggcatctctaggtggggagctgttattagccagc
tgttcccaggactgtctcatcagagtgtggaggctgtgtgccaagtctgggacagacgtc
cacacagagggcgatcacaccatcatcaaaatgaaagaggatgtttttgaagtaaaggag
agagacgtgtcttcagtgtttgctgtgtctcttgagactgtcctggcaggccacgagaac
tgggtctatggagtccactggcagcctcctttctacaaaggtggtgagctacaacagcct
cttcgtctgctctcagcctctatggacaaaaccatgatcctctgggctcctgaggaggga
tctggcgtctgggtggagcaggtgcgtgtgggggaggttggtggcaacactctgggtttc
tacggctgccaggtgagtccggacggctccatgatcgtggctcacgcttttcatggagca
ctccacctgtggtgcagagaacaagacaaagaggggcaatggaggcctggggttgtgctg
tcgggtcactttaatgcagtccaggacctgagctgggatcctgagggtgagttcatcctg
agtgtgggctcagaccagaccaccagactctttactccatggaggaaccaagatgccaaa
caggtaacctggcatgaaatctcccggccacagatccatggatatgacatgcagtgtctg
gcaatggttggaaagtttcagtttgtgtcaggagctgacgagaaggtcctgcgagtgttt
caagcacctcggaattttgtggagaattttgccaacatctctgggacctcaaaagaaaag
ctgttggcatcgagtgactcggccaaccttccggaaggagccagcatacctgctttgggt
ctgtccaacaaggcggtatttcaaggtgaccttacccccaaaaccaataaagaagagggg
cagttcaacagtgtatctgatcaataccaggagtcttacttccacccgctcatcatgact
gagcccccgccagaggatcatcttctccagaacacactgtggcctgaggtccagaaactg
tatggccacggctttgagatgttctgtctcgcttcagacagcgccaggacggtggtggcg
tctgcgtgcaaggcatctaaagccgagcatgcagcagttctgctgtggagtacagcaaca
tggcgtcagctgcagacgctgccatgccacaccctcaccatcacccagatggccttctcc
cctgatgcacaactcctattggctgtttcccgggatcgcacctggtctttatggagacgg
aaccttcccacacccgaaagtccagagccgcggttctcactgagtgcacatacagggaag
gacacagccgtacacagccgaatcatctggtcatgtgactggagcccagacagtaaatac
tttgtgacatccagtcgggacaagaaggtgatggtttgggggccgtgcagattagaggac
tctggagactccgtccttcctcctgagattaaaccatgttcttccatcttggatgtgggc
gattctgctactgctgtggctttctgccccgttttctgctctgatagcagctacctgctt
gccgtgggcctggagtgcggcaggatcttgctgtccaggtggagtccaggcccggagtct
gctggaggacaggactggagcagctgtggccaaacagacatcctacagagccacgctttg
acggtcaagcggctccgctggagacccaggcccggccgagcaggtcaccagaacaaaacg
ctagatggacagaatgacgacgggagtgacgttgaggacgagaactcctgggtccagctc
gccagcgccagcgccgaccactccatcaaaatcttcaacgtcaacacacggactctttag

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