Pseudoliparis swirei (Mariana hadal snailfish): 130192892
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Entry
130192892 CDS
T09868
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130192892 (usp8)
04137 Mitophagy - animal
130192892 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130192892 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130192892 (usp8)
04121 Ubiquitin system [BR:
pswi04121
]
130192892 (usp8)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130192892 (usp8)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130192892 (usp8)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Others
130192892 (usp8)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130192892 (usp8)
BRITE hierarchy
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
130192892
NCBI-ProteinID:
XP_056269059
LinkDB
All DBs
Position
4:18854551..18865023
Genome browser
AA seq
1074 aa
AA seq
DB search
MPAVSTGVKKLHVSTSLGELNKKAEIKPDKTSTRSYVQSACKIFKAAEEFRLDRDEEKAY
VLYMKYLTVYGIIKKRPDFMQQPEYFMTLLGPNSFKKAIEEAEKLSESLKLRYEEVEVRN
TLEEKEKQEEKKRKEEITEKDSGRSSPKVSSANNDSKKVKGEHNEKKTELKNATSKAAVP
AGGISAERLFHMMKDQTITIIVMDARSHGDFEESRIKVPDQTCVSVPEEAISPGIIVSQI
EAKLPEVSKEHWKRRGLVDYIVLLDWFSFVSDLTLGTTLQSLKDALFKWDSITILRSMPL
VLEGGYENWLLFYPMYTTNAKVRPPRQNIISVTPQLNFSYPSLEEPKPPTPPPPEPEVTP
KPQESSAPVLVNGFPPAEPPTSTTDRLPDIIDSIVTGDTNSEQDLSLKGPATTKAFPQFD
RTKKPSVRVLNDPKSSQNGSAKDSLQNGPLVPDRSVKPSLIPNNSLSKEEQSQIHSEAVA
GMEKAKQEQEKRNQERRVEEEKREKDQKERLEKEQSEKRTKENEDDGPQEKKKLERQKAE
EEEDKENSVWDGKERRGKEQNSDTPTKSMSLDSPAPNHVVNEIKREPLTRARSEEMGRSV
PGLPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPSVKQKPPQPAEPDT
SREQEQSKLKRSYSSPDISQDLREEVQKKVAAETTTAAVIPTINRETKPPSKVYSKVEIV
RPSATKIRNLNPSFGGLGPSLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNNNYYMEDIN
RYNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKVTIGKINDQFAGSEQQDSQELLLF
LMDGLHEDLNKADNRKRYKEEENDHMDDQTAADLAWSKHKLLNESIIVALFQGQFKSTVQ
CLTCHRMSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDST
KKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTSVDFSLDTLDLTQYVIGPKPTEKRYCLFG
VSNHYGGLDGGHYTAYCKNAHKQRWYKFDDHEVTDISTSSVKSSAAYILFYSAL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtctccaccggggtcaaaaagctgcatgtgtccacgtctctgggtgaactc
aataaaaaggctgaaattaagccggacaagacgagcaccagaagctatgttcaaagtgcc
tgtaaaatcttcaaggcggcagaggagtttcgtctggacagagatgaggagaaggcttat
gtgctgtacatgaagtatttaacagtatatggcattatcaagaaaagaccagacttcatg
cagcaaccggagtatttcatgaccttgcttgggccaaacagctttaagaaagccattgaa
gaagctgagaagctctctgaaagccttaaactcaggtatgaggaagttgaggttcgaaat
acacttgaggagaaggagaaacaagaggagaagaaaaggaaggaggaaataacagagaaa
gatagcggtcgaagctctccaaaagtttcatctgcaaacaatgacagcaaaaaggtaaaa
ggagaacataatgaaaagaagactgaactcaagaatgcaacctcaaaagctgcggtgcca
gctggtggaatttcagctgagaggcttttccacatgatgaaggaccagacgataacaata
attgtcatggatgcccgcagccacggggactttgaggagtcgcgcattaaggtcccagac
cagacctgcgtcagtgtgcctgaggaggccattagcccaggaatcattgtgagtcagatt
gaggcaaagctgccggaggtgtccaaagagcattggaaaaggcggggtcttgtggattac
atcgtcctactggactggttcagttttgtctctgaccttacacttggcaccaccttgcag
agcctcaaagatgccctcttcaagtgggacagcatcaccatcctgcgtagtatgccgctt
gtgctggagggaggctacgagaactggctgctgttttacccaatgtacacaaccaacgct
aaagttcgcccccccagacagaatatcatcagcgtcacccctcagttgaactttagctac
ccatccctcgaggaaccaaagcctccgaccccacctccaccagagcctgaggttacaccc
aagcctcaggaatcctcagctcctgtgctggtgaacgggtttccaccagcagaacctccc
acatcgacgaccgacaggctgccagatattatcgactcaatcgtcacaggcgacacaaat
tctgagcaagaccttagtctgaagggccccgcaacaaccaaggccttcccccagtttgac
cgtaccaagaaaccctctgtccgggtgttgaacgatcctaagtccagccagaacgggtca
gcaaaggactccctacagaacggcccacttgttccggaccgctcggtcaagccatcgctc
atccccaacaactctttgtctaaagaagagcaaagccagatccactctgaggcggtggca
gggatggagaaggcaaagcaagagcaggagaaacgcaaccaggagcgtcgtgtagaggaa
gagaaacgggagaaggaccagaaggaaaggctagaaaaggagcaaagtgaaaagaggaca
aaggaaaacgaggacgatggacctcaggagaaaaagaaactggaaaggcagaaggcagag
gaagaggaagataaagagaatagtgtgtgggatgggaaagagaggaggggtaaggagcag
aactctgacactcccacaaaaagtatgtctctggactctccggctcccaaccatgttgtt
aatgaaattaagagggagccgctgacccgggcaaggagtgaggagatgggtcggagtgta
ccaggccttccagtcggttggatgaagttccttgacacggtgacagggacttaccgatac
taccattccccaaccaaccgtgtccacctgtaccctccggaggtcactgttccccagacc
ccaccctccacgccgccatcagtcaaacagaaaccaccccaaccagctgagccagatacc
agccgtgaacaggaacagtctaaactcaaacgctcctactcctccccggatatcagccaa
gacttgagagaggaagtccagaagaaggttgccgcagaaacgaccactgctgccgtcata
cccaccatcaacagagagacaaaaccgcctagtaaagtctactctaaagtggagattgta
cggccatcagctaccaaaattcgcaacctgaatccttcatttgggggtctgggtccatca
ctgactggccttcgcaacctgggcaacacgtgctacatgaactccatcttgcagtgtctg
tgtaacactccggccatggctgagtacttcaacaacaattactacatggaggacatcaac
aggtacaacatactgggccataaaggggaggtggcggaggagtttggtgtgatcatgaag
gccctgtgggccggtctgtacaagtgcatcagtccgcgggacttcaaggtcaccataggc
aagatcaatgatcagtttgctggctctgagcagcaagactcccaggagctgctgctgttc
ctgatggatgggctccatgaggacctcaacaaggcggacaacaggaagcggtacaaggag
gaggaaaacgaccatatggatgatcagacggcagccgacttggcctggagcaaacacaag
ctgctcaatgagtccatcattgttgcgctgttccaggggcagttcaagtccaccgtgcag
tgtctgacctgccaccgcatgtcccggacatttgagacctttatgtacctgtcgctgcct
ctggcctccaccagcaagtgctccctgcaggattgtctgaggttgttctccaaagaagag
aagctgaccgacaacaacaaggtgttctgcaggcactgcaaggcccacagagattccacc
aagaaactggagatctggaaggtcccacccatcgtcctggtgcacttaaaacggttctcc
tacgagggccgatggaagcagaagctgcagacttctgtagacttctctctcgacactctg
gacctgacccagtacgtcattggaccaaaaccgaccgagaagagatactgcctctttgga
gtttctaaccactacgggggtttggacgggggccactacaccgcctactgcaagaacgcc
cacaaacagcgctggtacaagttcgacgaccacgaggtgaccgacatctccacctcctcc
gtcaagtcctccgcagcctacatcctgttttactccgccctgtga
DBGET
integrated database retrieval system
