Pseudoliparis swirei (Mariana hadal snailfish): 130192913
Help
Entry
130192913 CDS
T09868
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130192913 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130192913 (bbs4)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130192913 (bbs4)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
BBSome
130192913 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_15
TPR_7
ARM_TT21_4th
ARM_TT21_2nd
ARM_TT21_C
NatA_aux_su
ARM_TT21_N
PknG_TPR
Wzy_C_2
TPR_20
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
130192913
NCBI-ProteinID:
XP_056269081
LinkDB
All DBs
Position
4:29181073..29194002
Genome browser
AA seq
537 aa
AA seq
DB search
MATASSVDHPKMADEEINTALPLATEAKKRRAPKAPELPIVERINWLIHHHYIRKDYDTC
KAMIKEQLQETNGMCEYAIYVQALIMRLEGKIQPSLELFQSCVILNPSSADNLKQVARSL
FLLGKHKAAIEFYHEAAGLNEKDWEISHNLGLCYFFIKDFKRAEEHLNIALRINKHDKTF
MMLGKVHLQAGETDKAIEVYRTAVEFSPENTELLSTLGLLFLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYMSPFDWKVLYNLGLVHLTMQQYASAFHFLNAAISLNPRMGELYMLLAVALTNL
EDVDNATRAYEQAAIIDESNPLVNLNFAIFLYNHGDKKATLDQYQEMERKVNLLRDNNSN
FEFDTELMDMAQKMGAALQVTEGLVWTKPGKDSKSKANSAAAAKALGTNQALGQAMSSAA
SYNKNLQLPTGGSMPLEPEPDVETAPSPPTDPPGSPEPAESKNPRPRTSKRKSKVEE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcttcgagtgtcgatcatcccaagatggcggacgaggagataaacacggcg
ctcccacttgccactgaagccaagaaacgtcgagcacctaaagctccagagcttcccatt
gtggagaggataaactggctgatccaccatcactacatccgtaaggactatgacacctgc
aaggcgatgatcaaagaacagctgcaggagactaacggaatgtgtgaatatgccatatat
gttcaagcattaatcatgcgcctcgagggcaagatccaaccgtccctggagctgtttcag
agctgtgtcatcctgaatcccagcagcgctgacaacctcaagcaggtggccagatcgcta
tttctcctgggaaagcacaaagcagctattgagttctaccacgaagctgcggggctcaac
gagaaagactgggagatcagtcataatctggggttgtgctatttcttcatcaaagacttc
aagcgtgctgaggagcatctaaacatagctctccggattaataaacacgacaagacgttt
atgatgctcgggaaggttcatctgcaggctggagaaaccgacaaggccatcgaagtgtac
aggacggccgtggaattctctccagagaatactgaactcttgtctactctcgggctgctg
tttttacagcttgggaaataccaaaaagcatttgagcaccttggaaatgccctcacgttt
gaccccaacaattataaggccatcctggctgcgggcagcatgatgcagacccacggcgac
tttgatgtggccatgaacaagtacagagtggcggcctgcgccgtgccagagagcccgccc
ctctggaacaacatcggcatgtgtttcttcgggaaaaagaagtatgtggcggccatcagc
tgcctgaagcgagcccactacatgtctccctttgactggaaggtgttgtacaacctgggt
ctggttcacctgaccatgcagcagtacgcctctgccttccacttcctcaacgccgccatc
agcctcaacccacggatgggggaactctacatgttactggcagtggctctgaccaacctg
gaggacgtagacaacgccaccagagcgtatgagcaggctgccatcattgacgagtccaac
cctctggtcaacctgaactttgccatcttcctctacaaccatggcgataagaaggccact
ctggaccagtatcaggagatggagaggaaagtcaacctgcttcgagacaacaacagcaac
tttgaatttgatactgagctcatggacatggctcagaagatgggagctgctctgcaggtg
acggagggtctggtgtggactaaaccaggcaaggactccaaatccaaagcaaactctgcg
gcggccgccaaagccctcggtaccaaccaagctctgggccaagccatgtcttctgccgcc
agctacaacaagaacctccagctgccaacgggtggttccatgcccctggagccggaaccg
gatgtggagacggcccccagcccgcccacggatcctccgggctccccagaacctgcagag
tccaaaaaccccagacccagaacctccaagaggaaatctaaggtggaggaatga
DBGET
integrated database retrieval system
