Pseudoliparis swirei (Mariana hadal snailfish): 130192930
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Entry
130192930 CDS
T09868
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130192930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130192930
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130192930
SSDB
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Paralog
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Motif
Pfam:
SSF
F13C5_C
Motif
Other DBs
NCBI-GeneID:
130192930
NCBI-ProteinID:
XP_056269108
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All DBs
Position
4:15418760..15422660
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AA seq
593 aa
AA seq
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MTIHVEGLVAIAIFYLLILFVGIWAAWKNKHSGEAEGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVMVDINIKISVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFIGLWISVPFALTNPAVSDITITAVKQVYQSPWRGSIHKGDTW
VWIDNFCLLMLGGIPWQVYFQRVLSASSANYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTSYGAISPKEKDQADMILPIVLQHLCPPFVSFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLTFRQSASDREIVWVMRITIFVFGGLATLMALVTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAGYLFGMVLRIGGGEPYLQLPPFIYYPGWTTEQRIHHISGEM
EEVVIQKFPFKTMSMLASFLGNVAFSYLTKYLFESGKISHKYDFFDAVHSGEIMDKTTLV
TRSNNIGLSEMAPVKPRLSVSLAAAFTRRDTLPKEMVVEEEEFSSDSSHHDEE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccatgtagaggggcttgtggctatcgcgatcttctatctgctgatcctgttc
gttggcatctgggcggcatggaagaacaaacactccggggaggcggagggcaccgaccgc
agtgaaaccatcatggtcggagggagagacattggactatttgtcggtggatttaccatg
acagcgacctgggttggaggaggatatataaatggcacagctgagtatgtttatctgcct
gattatggcttggcttgggctcaagctccctttggatatgccctcagtcttgttgtgggg
ggtcttttcttcgctaagcccatgcgctctcgaggttacgtcaccatgttggacccattc
caacagaagtatgggaaacgtatgggaggcctcctcttcatacctgcgctcatgggagag
atcttctggtccgcggcgatcttatccgccctcggtgctactctgagtgtcatggtggac
atcaacattaagatatcagtggttatctcagcgctcattgcaatcttttacaccctggtt
ggaggactctactctgtggcctacacggacgtcgtgcagctcttctgtatctttattggc
ctgtggatcagtgtcccgtttgctttgaccaaccctgcggtgtcggacattaccatcacc
gcagtgaagcaggtgtaccagtcgccctggagaggcagcattcacaagggcgacacctgg
gtctggatcgacaacttctgcctcctgatgcttggaggaataccctggcaggtgtatttc
cagagagtcctgtctgcctcctcggccaactacgcccaggttctctccttcctggccgct
ttcgggtgcctcgtcatggcggtgccctccgttctcatcggggccatcggggcctccaca
gactggaaccagaccagttatggtgctatttctccgaaagagaaggaccaagcggacatg
attctacccatcgtgctccaacacctttgcccaccattcgtctctttcttcgggctgggt
gccgtgtctgcagccgtcatgtcgtctgcagactcctccatcctgtcagccagctccatg
tttgcgaggaacatctaccagctcaccttcagacagtcggcgtctgaccgtgagatcgtg
tgggtgatgcgtattaccatctttgtattcggcggccttgccacgttgatggcgctggtg
actgggacagtttacggcctctggtacctgagctcagatctggtttacgtcatcatcttc
ccccagctgctcagcgtgctcttcgtcaaaggcaccaacacgtacggctccgtggccggc
tacctgtttggcatggtgctgcgtataggtgggggagaaccctacctgcagctgcctcct
ttcatttattaccctggctggaccactgagcagaggatacaccacatctctggagaaatg
gaggaagtcgtcatccagaagttccccttcaagaccatgtctatgctcgcctccttcctg
ggtaacgtcgctttctcctatctgacaaagtacctgtttgagagcggcaagatttcacac
aaatacgactttttcgacgcagtgcacagcggcgagatcatggataagacgacgctcgtg
actcgtagcaacaacatcgggctgtcggagatggcgcccgtcaaaccgcggctgagcgtg
agcttggcggccgccttcacgcgccgcgacacactgccaaaggaaatggtggtggaggag
gaggagttcagctctgattcctcacaccatgatgaagaatga
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