Pseudoliparis swirei (Mariana hadal snailfish): 130192972
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Entry
130192972 CDS
T09868
Symbol
chrnb4
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4 isoform X1
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130192972 (chrnb4)
04082 Neuroactive ligand signaling
130192972 (chrnb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130192972 (chrnb4)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130192972 (chrnb4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
130192972
NCBI-ProteinID:
XP_056269184
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Position
4:complement(3556933..3576917)
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AA seq
587 aa
AA seq
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MGRIASNQTPQKHGAAARYIPLVRSASPGISTVLSKCSYPHRGRVRHVREGERWTPRLRG
IDTGDSRVSDGAENMARTLWTLACFLSLVHCGGCADSEERLVNWLLGKDRYNPLIRPAVS
RTERVPVKLQVSLAQLISVNEREQIMTTNVWLTQHWVDYRLSWEPAKYEGIDKLRIPSRH
IWLPDIVLYNNADGTYEVTVFTNAIVLSNGSVNWLPPAIYKSACKIEVKHFPFDQQNCTL
KFRSWTYDHTEIDLILKSAAASMDDFTPSGEWDILALPGRRTVSALDPTYVDLTYDFIIK
RKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKITLCISVLLALTVFLLLISKIVPPTS
LDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHSMPPWVKLVFIVKLPALLFMRR
PRNISAAQRLRRRFGARRSVLGSGFPDFPSASSALQTSHSVFSTTGHKRGGHGHPNRKGH
SRSADFIPGGFAAFAQDLGRKSHADWAADVQEAVDGVLFVAEHMMGDDDDQSVIDDWKYV
AMVVDRMFLWIFVIVCVTGTLGLFLQPVFQTQIVPNQPPNSEATTTK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggggcggattgcttccaatcaaaccccccaaaaacacggagcagcagctagatatata
ccacttgttcgttctgcttctccaggcatcagcaccgtgctgtcgaagtgttcctacccc
caccgcggtagagtccggcatgtccgagagggagagcgctggaccccgcggctccgaggc
atcgacaccggcgactcccgcgtatcagatggtgccgagaacatggcgcggactctctgg
accctcgcgtgcttcctctcgttggttcactgtggcggctgtgccgactcggaggagcga
ctcgtgaactggctgctggggaaggatcgctacaacccgctcatccgcccggcggtcagc
cggaccgagagagtcccggtgaagctgcaggtgtctctggctcagctcatcagcgtgaat
gaaagagagcagatcatgaccaccaatgtgtggctcactcagcactgggtggattacaga
ttatcgtgggaacccgcaaagtacgaaggcatcgacaagctgcgcatcccctccagacac
atctggctgccggatatcgtcctgtacaacaacgccgacggcacctacgaggtgacggtg
ttcaccaacgccatcgtgctttccaacggcagcgtcaactggctgccgccggccatctac
aagagcgcctgcaagatcgaggtgaagcacttccccttcgaccagcagaactgcacgctc
aagttccgctcgtggacctacgaccacacggagatcgacctgatcctgaagtcggcggcg
gcgagcatggacgacttcaccccgagcggcgagtgggacatcctggcgttgccgggccga
cggacggtcagcgccctggaccccacctacgtggacctgacgtacgacttcatcatcaag
aggaagccgctcttctacaccatcaacctcatcatcccctgcgtgctcatcacctcgctc
gccatcctggtcttctacctgccgtcggactgcggcgagaagatcaccctctgcatctcc
gtgctgctggcgctcaccgtcttcttgctcctgatctccaagatcgtgccgcccacctcg
ctggacgtgccgctgatcggcaagtacctgatgttcaccatggtgctggtgaccttctcc
atcgtcaccagcgtgtgcgtgctgaacgtgcaccaccgctcgcccagcacccacagcatg
cctccgtgggtcaagctggtgttcatcgtcaagctgcccgccttgctcttcatgaggcgg
cctcggaacatctccgcggctcagaggctgcgccggcgcttcggggcgaggagatccgtc
ctgggttcgggtttcccggatttcccctcggcgtcctccgccctgcagacttcccacagc
gtcttctccacaacgggacacaagcgcggcggacacggccaccccaacaggaaggggcac
tcgcgctccgccgacttcatccccgggggcttcgccgccttcgcccaggacctcgggcgg
aaaagccacgcggactgggccgccgacgtccaggaggcggtggacggcgtgctcttcgtg
gcggagcacatgatgggagacgacgacgaccagagcgtgatcgatgactggaagtacgtg
gccatggtggtggaccggatgttcctgtggatcttcgtgatcgtgtgcgtgacgggcacg
ctgggcttattcctgcagcccgtcttccagactcagattgttcccaatcagccgcccaac
tcagaggctacaacaacaaaatag
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