Pseudoliparis swirei (Mariana hadal snailfish): 130192985
Help
Entry
130192985 CDS
T09868
Symbol
itgb6
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-6
KO
K06589
integrin beta 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130192985 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130192985 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130192985 (itgb6)
04810 Regulation of actin cytoskeleton
130192985 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130192985 (itgb6)
04515 Cell adhesion molecules [BR:
pswi04515
]
130192985 (itgb6)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130192985 (itgb6)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin beta subunits
130192985 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
130192985
NCBI-ProteinID:
XP_056269198
LinkDB
All DBs
Position
4:complement(18153807..18165085)
Genome browser
AA seq
782 aa
AA seq
DB search
MGLLLLSLILRYWINTVEGSCSAGSAVTCDDCLQLSSHCAWCTQENFTDWFSVNERCDTL
DILLEMGCARDQLEFPVSKGQILQDRPLGKKTGNVNSTQISPQKMALALRPGSPVTFQVK
IQHTEDYPVDIYYLMDLSASMIDDLAMIKDLGSSLSQEMAKLTSKFRMGFGSFVEKPVLP
FIRITEEELANPCSSVASTCLPTFGYKHVLSLTSSTDKFNEIIAKQRVSANIDLPECGFD
AVMQAAVCGDKIGWRKDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGQCHLDGNNEYSMS
TVQEYPTLGQLIDKVVENNILLIFAVTEGQKHNYKNYAHFIPGATVGILAADSRNILELI
VTAYKELRSEIELEVLGDTEELQMSFTTICPNGVVLPDQKRCSNIKPGETVVFNVSVELP
GCVSGPRHFSLKPVGLQDSLEVELESLCSCDCRQAPEANSSQCVEGQGAFQCGVCVCQPG
FLGAECECNEESALLSNCLANNESEICSGQGQCYCGQCACHPSSFGRIYGPYCECDDYSC
VRSHGKLCGGHGACDCGECHCESGWTGEYCNCSTSAEACVSEDGALCSGRGRCECGHCVC
SVPGASGDRCEKCPTCGDACSSARTCVACHLQDKEDAELCDQMCSVXKISINTTADYDKS
PSMQCKLMMENECWISFGVVGGETGTIAYDLRMYGCPEPPNIPMIILGVSLSIVCIGLIL
LAVWKMLVSVHDRKEVAKFEAERSKAKWQMGTNPLFKSSTSTFKNVTYKNTEREKIITLD
HF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggcttctactgctgagcctgattcttcggtactggatcaacaccgtggagggctcg
tgctccgctggcagcgctgtgacctgcgatgattgcctgcagctcagttctcactgtgcc
tggtgcacacaggagaatttcacagactggttttcggtcaacgaaagatgtgacacactg
gatatcttactcgaaatgggatgtgctcgggaccagctggagttccctgtttccaaaggc
caaatcctgcaggatcgaccactcgggaagaagacaggcaacgtcaacagcacacagatc
tccccacagaaaatggccctcgcgctgcgaccgggcagtccggtgactttccaggtcaaa
attcaacacacggaggactatcccgtggacatctactacctgatggacctgtcggcatcc
atgatcgatgatctggcgatgatcaaagacttggggtcctctttatctcaagagatggcc
aagctcaccagtaaatttcgaatgggctttggctcctttgtggagaagccagtcctgcct
ttcatcagaatcacagaggaagagctggccaacccctgcagcagcgtagcctcaacctgc
ctgcccacgtttggctacaaacacgtcttgtctctgacgagcagcaccgacaagttcaac
gagataatcgcgaagcagcgggtctctgcaaatattgacctgccagagtgcggctttgac
gccgtcatgcaggcagctgtttgtggggacaagatcggctggaggaaggattccatgcgt
ttgctggtgtttgtgagtgatgctgactcgcactttgggatggacagtaagatggccggc
attgtgattcctaacgatggacagtgtcacctggacggcaacaacgaatactccatgtcc
accgtgcaggagtatccaactcttggtcagctgattgataaggtggtggagaacaacatc
ttgctgatatttgctgtgaccgaaggacaaaaacacaactataagaactatgcacatttc
atacccggtgccaccgttggaatcctggcggcagattcgcggaacatcctggaactgatt
gtaacggcatacaaagagctgcgttcagagatcgaacttgaggtccttggagacacagag
gagcttcagatgtcttttacaaccatttgcccaaatggggttgtcctccctgatcaaaaa
cgctgctccaacatcaaacctggagagacggtcgtgttcaacgtgtccgtggagctccca
gggtgcgtgtcgggacctcggcacttctccctgaaaccggtgggtttacaggacagtctg
gaggtggaactggagtctctttgctcgtgtgactgccggcaggctcccgaagcaaacagc
agccagtgcgtcgagggccaaggggctttccagtgcggcgtgtgtgtgtgccagccgggc
ttcctgggagcggagtgcgagtgcaatgaggaaagcgctttgttgagcaactgcctcgcc
aacaatgagtcggagatatgcagcggccagggtcagtgctactgcggacagtgtgcgtgt
cacccatccagcttcggacgcatctacggaccttactgcgagtgtgacgattactcctgt
gttcgctcccacgggaagctctgcggaggccatggggcgtgtgactgtggggagtgtcac
tgcgaaagcggctggacgggagagtattgtaactgcagcaccagcgccgaggcctgcgtg
tcggaggatggcgctctctgcagcgggcgggggagatgcgagtgcggccactgcgtctgc
tccgtacctggagcgtctggggacaggtgtgagaagtgcccgacgtgcggagacgcctgc
agctctgcaaggacctgtgtagcatgccatctgcaggataaggaggatgccgagttgtgt
gatcaaatgtgcagcgtcntcaaaatttccatcaacacaacagcagattatgacaagagc
ccttctatgcaatgcaagttaatgatggagaatgagtgctggatctcgttcggtgtggta
ggaggtgagacggggaccattgcatacgatctccggatgtacggttgccccgagcctccc
aacatccccatgattatcctgggcgtctccctttccatcgtgtgcatcggcctgatcctg
ctggctgtgtggaagatgttggtgtcggtccacgaccgcaaagaagtggccaagtttgag
gctgagaggtcaaaggcaaaatggcagatggggaccaaccctctgttcaaaagctcgacg
tcgacatttaaaaatgtaacttataagaacactgagagagaaaagatcattacactggat
cacttctga
DBGET
integrated database retrieval system
