Pseudoliparis swirei (Mariana hadal snailfish): 130192987
Help
Entry
130192987 CDS
T09868
Symbol
map1aa
Name
(RefSeq) microtubule-associated protein 1A isoform X1
KO
K10429
microtubule-associated protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130192987 (map1aa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130192987 (map1aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130192987 (map1aa)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130192987 (map1aa)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
130192987 (map1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
130192987
NCBI-ProteinID:
XP_056269207
LinkDB
All DBs
Position
4:complement(32832443..32842208)
Genome browser
AA seq
2323 aa
AA seq
DB search
MDGVTEFTEYVSETVDVPSSFDLLEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNI
LVDGGSDRKSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLFQRKVAEQEEARNQGSGSS
SLISPELGIVFFNIPEKLRMPESTLKVKRSIEEASLTLQYLNKLGITPEPLHRVVGNTIE
PITLFHKLGVGKLDMYVLNPVKESKEMQFLMQKWAGNSKAKTGITMANGKEGEISVPYLT
SVTALIVWIPHRPTERIVRVLFPGNAPQNKIFEGLEKLKHLDFLRYPVATQKEMSSGAPP
PVIKQTKMRSRTDSKESLKSSPKPHSKTTKKEAGGQEEESKSEITKENKVEKKEEKKFKS
LKATKQQKNIEVAPVAAKTEKKKIPKEKTAKNEKVSKMDEKKDKEKKEIKKEKHEVKKDD
NIRKEEKKESKKKDPSKPELRKITKPDLKPLTPEVRKTLHKAKTQAKPKMDKNKAVKEEA
HEKKPVQNIPQEIAAAALADRSIVSSPEDLTEDFKALKLEEMSKVKPEPIQNDVVFGHSL
HTETKVPSLVFHDEKVSAPATDAKSSSPKSPVEPIKDDKYKHDAVRVAAAEKEEASNGFD
KKYEEEKMEKYDEYLAEDDVRDRSKKSESSEEEGDVIEKADLEGTEDDEFPKYKTEEAKR
EKTGKEWDTKPADVKPPSATAPCGQAAASVSEQFSFIQDETIPGYSETEHTISDEDIHEE
PEDRIPQLHYDVASYEISVPDVPGTFDSMHGIKEMKCPGLADVKPRAFAGGHEHELAHYP
SVLAAPLAEEEHISSATSITEYDKLSSVATSVAEDQSIASVTAAQTEEAGKNSLLLDTIN
SLPSRAEAAQGKDYLHSAGTISPTSSLEDDKCFKSPSSDEYQPIIPEMEGDAKIKLVHEE
DDEDEEDEDEDQTPNVDFPLGKLQEGYEHAAFMMLQEKQKSPSDTFSPPPPLFSTLQYSP
TQAVKENQSLFSSEEFKTDIKPISPPPPFSPRLELDFHLRQESEERCLSPDDSTMKLASP
TQSVPTSSGYSPTEEKPFKIEDKDEADKSANDSTAFIGDKTASEESEESSEDNEEEDDSY
TKKDLQPTVKAKLMEAKEGCFLDDDFASEAKSTKVETEVKSSDKTQVSFGTEKPQSEEMY
SDEDEEDEQDDDFQSGEGSHKPSSTDQSKVDLDKESEEEIDDALMEQDKSVHFSLYNYPE
KEGKEKALYIRQDTPYVHGKTFSYADIYGSEDSDSYRQESFDKAEKDSAKGEVDSQKPEP
TPAPVATTDKMSEKEGSTVSSGKESPVSPWLDSKSTSAIPPYEEVQREEAFGYDAGSRFP
SVADRPEASSTSLSPDDSLRSQTDGTKPQKYSSTTLFDAAAAGYNNKGGCLEVDMRKLTA
RDEEDDDDDVVDEDDEDEEDEEDEDDDDDYGGVAVDSHMEKGAEEKSEKEVKSPISEMFG
SKRPEFMVSMAGYGYNSQGLPSNSSSLAKTEHEAKTDSSSLGGKPTDLGATGFSGYSSGF
EYSYGSGEKDLFLSNQTPDKGKEDFTLKSTEDSYYQNQKADADSEKQKTPDLMSKSSLDT
SFQYTTTAAPGYSSSSAYSYSSSTSGSLSTSRQFGEELGTPAEPLFEFSSFKDEHSPVMD
SSSSGGAKDDYLEVSEKQIAATTAAESAFEEVQSFPSLSSAAFAGDENEHTTSLGGVMDQ
DPQSDCFYTPEWSKLNTAVGYGPSAGPFAQHSDVSKDKEAASAALFGVTSSPRPDIEGKH
YFEETDSSEEEDEEAYMREMTRRSPSGGLAGSPSFSDKPVAPAACEKTDGGLPNVLGSDV
PSTVNGPAEVNASAGAAAGGASSGPAKAEPREGAAAYRSSFEWESKSQMAMVPGDSPPHH
RHEDEFEEECEMEPEHPARPLSLSSTDQPFRSPFYAEERSRGAQDDDDGDTDAAGDVPTG
AASSYASRSSPGYSSSESRQPKQDLSPSFMNPCMRQLSSDEDEEERERRSDQSQEADGLD
LPVKTRAHELPHRPSGALQLAGGTSAGLVLATEDTPPTSISESLGSQSDSDAPPGTEEFP
LATGEGNMDSDEDADYMPIDKLSAPGGGSHHSSKRSNDPPPAPRTDPSPQPPCPDVCMVD
PDALDNGLTVKKEPKAKGLKKTSGKTKSGSPARRKRSPMPVKQMASPRSASLKKKEADKR
SRTSRLSDGQGSRDDELSRSSYNPGKTSTNGVKSGSGSQKTGPAGAPGLPIYVDLAYIPN
HCNAKNVDQEFFKRVRSAYYVVTGNDEASGEPGRGVLDALLDGKAQWGSNLQVTLIPTHD
TEVTREWYQQTHERQQELNVMVLASSSTVVMQDESFPACKIEF
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtcacggagttcaccgagtacgtctcggagacggtcgatgtgccgtcatcc
tttgacctcctggagcccccgacctctggaggttttctgaagctgtccaaaccctgctgc
tacatcttccccgggggccgaggggactccgctctgttcgccgtcaacggattcaacatc
ctggtggatggagggtccgatcggaagtcttgcttttggaagctggttcgccacctggac
cggatcgactccgttctgctcacccacatcggcgcagacaacctcccaggcatcaacggg
ttgttccagaggaaggttgcggagcaagaagaggcgcgcaaccaaggaagtgggtccagt
agcctgatctctcctgagctcgggattgtgttttttaacatcccagagaagcttcgaatg
cccgagtccacgttgaaagtgaagcgcagcattgaggaagcatctcttaccttgcagtac
ctcaacaagctcggtatcacaccggagcctcttcacagggtggtgggcaacactattgaa
cccatcacactattccataaacttggcgtgggaaagttagacatgtatgtcttaaaccct
gtaaaggagagcaaagagatgcagtttctcatgcagaaatgggctgggaacagcaaagcc
aagacggggattacgatggccaatggaaaagaaggagaaatatcggtcccctatttgaca
tcagttaccgctcttattgtttggattcctcaccgtccaacagaaaggatagttagggtg
ctcttccctggaaatgcaccgcagaataaaatcttcgagggccttgagaaactgaaacac
ctcgacttcctgcgataccctgtggctacccaaaaagaaatgtcatccggtgcacctcct
cccgttatcaaacagaccaaaatgagatcaagaactgacagcaaagagagtctcaagtcc
tcaccgaaaccccactctaaaaccacaaagaaagaagccggcgggcaggaggaagagtcc
aagagtgaaatcaccaaagagaataaagtggaaaagaaggaagagaagaaattcaaaagt
ctaaaagccaccaagcaacagaaaaacattgaggtggcccccgtggcagccaagacagag
aaaaagaaaatacccaaggaaaaaactgccaagaatgagaaggtgtccaagatggatgaa
aagaaagacaaagagaaaaaagaaatcaagaaagagaaacatgaagtaaagaaggatgac
aatataagaaaagaagagaaaaaggaaagtaaaaagaaggacccgagtaaaccggagctg
agaaaaatcactaaacctgacctgaagccactcacccctgaagtgaggaaaactctgcat
aaggcgaagactcaggctaagcccaagatggacaaaaacaaagccgtgaaagaggaagcg
catgagaaaaagccagtccagaacatcccccaggagatcgcagcagcagcgttggctgac
aggtccatcgtgtcctccccagaggacctcactgaggactttaaggctctgaagctagaa
gagatgtccaaagtgaagcctgagccgatccagaatgacgtagtgtttggtcattcactg
cacacggaaaccaaagtcccgtctttagttttccatgatgagaaagtctcagcaccagcg
actgatgcaaaatcgtcttcgcccaaatcccccgtcgagccgataaaagacgacaaatac
aaacatgatgcggtgcgtgttgcagccgctgaaaaggaagaagcgagcaatggctttgac
aagaagtacgaagaggagaaaatggagaaatatgacgaataccttgcagaggacgacgta
agggacagatcgaagaagagcgaaagctcagaggaggagggtgacgtcattgaaaaagct
gacctcgagggaacagaagacgacgagttcccgaaatataaaacggaggaggcgaaaagg
gagaaaactggaaaggaatgggacaccaagccggctgacgtcaaacctccgtcagccaca
gccccgtgtggccaagcagcagcctccgtctcggagcagttctccttcatccaggacgaa
accatccccggctactccgagaccgaacacaccatctctgacgaggacatccacgaggaa
ccggaggacaggatcccgcagctgcactacgacgtggcctcctacgaaatctctgtcccc
gacgtccccggtacctttgactccatgcacggcataaaagagatgaagtgccccggcctg
gccgacgtcaaacccagagccttcgcgggaggtcacgagcatgaactcgcacattacccc
tccgtcctcgccgctcctcttgcggaggaggagcacatctcctcggcgacttccatcaca
gaatatgacaaactgtcgtccgttgccacgtctgtagccgaggaccagtcgatagcctct
gtgacggcggctcagaccgaggaggccgggaagaactctctcctgctggacaccatcaac
agtcttccctcgcgggccgaggccgcccaggggaaggactatctccactcggcgggaacc
atttcgcccacttcttctctggaggacgacaagtgcttcaagtctccctcctcggatgag
taccagcccatcattcctgagatggagggtgatgcaaagatcaaactggtccacgaggaa
gacgacgaggacgaggaggacgaggatgaggaccagactccgaacgtcgacttccctctg
ggtaaactgcaagagggctacgaacatgcggccttcatgatgctccaggagaagcaaaaa
tctccctctgacactttttctcctcctcctcctctcttttctaccttgcagtactctccc
acacaggctgtcaaagaaaaccaatccctctttagctcagaggagtttaagaccgatata
aagccgatttcaccccctccgcctttctcccctaggttagaattagacttccacctcagg
caggagagtgaggaaagatgtctaagtccagatgacagcaccatgaaactggcctcaccc
acacagtctgtcccgacaagcagtggctactctccgacagaagagaaaccctttaagata
gaagacaaagatgaagcagacaaatcagccaatgacagcaccgcctttatcggggacaag
acagcgtctgaggagtccgaagaatccagtgaagacaacgaggaggaagatgactcttac
accaaaaaggacctacagcccactgttaaggccaagcttatggaggcaaaagaagggtgc
ttcctggacgacgacttcgcctctgaggcaaaatctacaaaggtcgaaacagaagtcaag
agctcggacaagacgcaggtgtctttcggcacagagaaaccgcagtctgaagagatgtac
tcggatgaagatgaagaagatgaacaagatgatgatttccaaagtggggaaggctcccat
aagccctcctcaacagatcagagtaaagtagacttagacaaagaaagcgaagaggagatc
gatgacgctttaatggagcaagataaaagtgttcatttcagcctctacaattacccggag
aaggagggcaaggaaaaggccctgtacataagacaggacacgccctacgtgcatggcaaa
acattctcttacgctgacatatacggctcagaggactctgattcgtatcgccaggagtct
ttcgataaagcggagaaggactctgcaaaaggggaagtggattcgcagaaaccagagccc
accccggctccggtagcaaccacggacaagatgtcagagaaggaaggatcgactgtctct
tccggaaaagagtccccagtctcaccgtggctcgactcaaagagcacttctgctatccct
ccatatgaagaggtccaaagagaggaggcattcggatacgacgcaggtagccgattccct
tcggtggctgacagacccgaggcctcgtccacttctttgtcgcctgacgattctttgaga
agccagaccgacggcacgaagccccagaagtactcctcgacgacactgtttgacgccgcc
gccgcaggctacaacaataagggagggtgtttggaggtagacatgcgaaaactgacagcc
agggacgaggaggacgacgacgacgatgttgtcgatgaagacgatgaggacgaggaagat
gaggaggacgaagacgacgacgacgactacggcggggtcgcggttgattctcatatggag
aaaggcgccgaagagaagtctgagaaggaagtaaaaagtccaatcagtgaaatgtttggc
tcaaagaggcctgaatttatggtttccatggctggatacggctacaacagccaggggttg
ccaagcaactccagctcactcgcaaagactgaacacgaagcaaagactgactcttcatcc
ctcggtggaaagccaacagatttaggagctacgggtttctctggctactcctcagggttt
gagtactcgtatgggagtggagagaaagacttgtttttatcaaatcagaccccagataaa
ggcaaagaggatttcactttgaaatcaacagaggacagttattaccagaatcaaaaagct
gatgctgattctgagaaacagaaaacaccagaccttatgagtaagtcctcactggacaca
agctttcagtacacgaccaccgccgcccctggctactcctcctcttcggcttatagttac
tcctcgtccacctcgggctccctctccaccagccgtcagttcggagaggagctggggacg
cccgccgagcctctctttgagttctcctcctttaaagatgaacactcgccggtcatggac
tcttcctcctctggcggcgccaaagatgactatctggaagtgtctgagaaacagatcgcg
gctacaaccgcggccgagtccgccttcgaggaggtccagtccttcccctcgctctcgtcc
gccgcctttgccggagacgagaacgagcatacgacctcattgggtggagtcatggaccaa
gaccctcaatcagactgcttctatacgcctgaatggtccaagctgaacacggctgttggg
tacgggccctcagcgggaccgtttgctcaacattcagacgtctccaaagacaaagaggcg
gccagtgccgctctgtttggtgtcacttcttcaccgcgccctgacatcgaaggcaagcat
tactttgaggagacggacagcagcgaggaagaggacgaggaggcttacatgcgtgagatg
actcgcaggtcgccttccggcggccttgctgggagcccctccttttctgacaagcctgtt
gccccagcggcctgtgaaaagacagacggtggcctccccaatgttctcggctccgacgtg
ccctcgaccgtcaacggccccgcggaggtcaacgcgagcgccggtgcggcagccggcggt
gcgtcttcaggcccggccaaggcggagcccagagagggagcagcagcgtacaggagctct
ttcgagtgggagtcaaagtcccagatggcgatggtgcccggagactcccctcctcaccac
cgtcacgaagacgagttcgaagaggagtgtgagatggagccagagcacccggcccgcccg
ctgtctctctcctccaccgatcagccgtttcgctccccgttctacgccgaggagcgcagc
cgaggagcgcaggacgacgacgacggcgacacggacgctgccggcgacgtgcccacggga
gccgcctcctcttacgccagtcgcagctctcctgggtactcctcctccgagagcaggcag
cccaaacaggacctctcgccatccttcatgaacccgtgcatgcggcagttgtccagcgac
gaggacgaggaggagcgcgaacgcagaagcgatcaatcgcaagaggccgacggactcgac
ctgccggtcaagacgagggctcacgagctaccgcatcgccccagcggcgctctgcagttg
gccggcggcacgtcggcggggctggttctggccacggaggacacaccgcccacctccatc
agcgagtctttgggctcccagtcggactccgatgcccctccgggcaccgaggagttccct
ttggccaccggcgaaggcaacatggactcggatgaggatgcagactacatgcccattgat
aaactatctgccccgggaggaggcagccatcattcctctaagaggagcaacgaccctcct
cctgctccccgcacggacccctcccctcagccgccatgcccggacgtttgcatggtggac
cccgacgctctggataacggcttaacggtgaagaaggagccaaaagccaagggcttgaag
aagacctcgggcaaaaccaagtcgggctccccggccaggcgcaagaggtcgcccatgccc
gtcaaacagatggcgtctcctcgcagcgcctcgctgaagaagaaggaggccgacaagagg
tcccgcacgtctcgtctgtcggacggtcagggatccagagacgacgagctctcccggtcg
agctacaaccccggcaagacgtcgaccaacggagtcaagagcggttcaggatcccagaag
accggccctgcaggcgctcccggtcttcccatttatgtggacttggcctacattcccaac
cactgcaacgccaagaacgtggaccaggagttcttcaagcgcgttcgctccgcgtactac
gtggtcaccgggaacgacgaggcgagcggcgagcccggccgaggcgtcctcgacgcgctg
ctggacgggaaagctcagtggggatcgaacctgcaggtgaccctgatcccgacccacgac
acggaggtgacccgtgagtggtaccagcagacccacgagcggcagcaggagctcaacgtc
atggtcctggcctccagcagcaccgtcgtcatgcaggacgagtccttccccgcctgcaag
atcgagttctag
DBGET
integrated database retrieval system
