Pseudoliparis swirei (Mariana hadal snailfish): 130193001
Help
Entry
130193001 CDS
T09868
Symbol
cars1
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine--tRNA ligase, cytoplasmic
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130193001 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130193001 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130193001 (cars1)
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
130193001 (cars1)
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
130193001 (cars1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130193001 (cars1)
Prokaryotic type
130193001 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
130193001
NCBI-ProteinID:
XP_056269252
LinkDB
All DBs
Position
4:complement(33914783..33935463)
Genome browser
AA seq
741 aa
AA seq
DB search
MSTSAEPVKGKRVQPPWTPPGGTEVPQLHLYNSLTRAKERFVPQKGNRVTWYSCGPTVYD
ASHMGHARSYISFDILRRVLKDFFRYDVFYCMNITDIDDKIIRRARQNHLLDQYQEKQPD
AEQILQDVLSAREVRLCEXQRVSTALRRRLTAFSSSPSRPRLQAVTRGKVAEVLQPLAQL
LLENSKDLLSDWLDQQFGSQVTENSIFSVLPSFWEGEFHKDMEALNVLPPDVLTRVSEYV
PEIVEFVSRVVSNGFGYESNGSVYFNTLKFDTDPQHSYGKLVPEAVGDQSALQEGEGDLS
ISADRLSEKKSPNDFALWKASKPGEPSWDSPWGKGRPGWHIECSAMAGSVLGESMDIHGG
GFDLRFPHHDNELAQSEAFFQNDSWVRYFLHTGHLTIAGCKMSKSLKNFITIKDVLAKNT
ARQLRLAFLMHSWKDTLDYSSNTMESAVQVEKLLNEFFLNVKDIMRAPCDITGQFEKWEA
AETELNNSFYDRKCGVHAALCDNVDTRGAVEEMRVLVGHSNGYIANRKGAKLKPNRMLLE
SIALYLTGMLKVFGAIEGSEPIGFPMGGRSQSADLESTVMPYLSVLSNFREGVRKIAREQ
KVTELLQLCDVVRDDTLPELGVRLEDHEGLPTVVKLVDKETLLKEKEEKKQMEAEKKRKK
EEAARKKQEQEMAKLEKMKLPPGEMFRSGTDKYSKYDDTGFPTHDAEGKELSKGQAKKLR
KLFEAQKKLHNEFLQRSRQGH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcagcggagccagtgaaaggaaaacgggttcaacctccatggactcctcca
gggggaaccgaggtcccccaactccacctctacaacagcctgaccagggcgaaggagcgc
ttcgtgccccagaaggggaaccgggtcacatggtacagctgtgggccgacggtgtacgac
gcctcgcacatgggacacgccaggtcctacatctcctttgacatcctgcggcgggtcctg
aaggacttcttcaggtacgacgtgttctactgcatgaacatcacggacatcgacgacaag
atcatcaggcgggcccgacagaaccacctcctggaccagtaccaggagaagcagccggac
gctgagcagatcctgcaggacgtcctgagcgcccgggaggtgagactctgtgagtaacaa
agagtgagcacggccctgaggaggagactcactgcgttctcctccagcccttccaggccg
cgcctgcaggcggtcacaagaggcaaagtggctgaggtcctgcagcctctggcccagctg
ctgctggagaactctaaggacctgctctctgattggctggaccagcagtttgggagtcag
gtgacggagaactccatcttctccgtcctgcccagtttctgggagggagagttccacaaa
gacatggaggccctgaacgttcttccccctgacgttctgacccgagtcagcgaatacgtg
ccggagatcgtggagttcgtgagtcgggtcgtgtccaacggcttcggctacgagtccaac
ggctccgtgtacttcaacaccctgaagttcgacaccgacccgcagcactcgtacggaaag
ctggtgccggaggcggtgggagaccagagcgccctgcaggagggggaaggtgacctgagc
atctccgcggaccggctgagtgagaagaagtcccccaacgacttcgccctgtggaaagcc
tccaagcccggagagccctcgtgggactccccctgggggaaggggcggcccgggtggcac
atcgagtgctcggcgatggccggctccgtcctgggggagtccatggacatccacggcggg
gggtttgacctccggttccctcatcacgacaacgagttggctcagtccgaggcgttcttc
cagaacgactcctgggtccgctacttcctgcacaccgggcacctgacgatcgccggctgc
aagatgtccaaatctctgaagaacttcatcaccattaaagatgtcttggcgaagaacaca
gctcgccagctgcgcctggcgttcctgatgcactcgtggaaggacacgctggactactcc
tccaacacgatggagtcggccgtccaggtggagaagctcctgaacgagttcttcctgaac
gtgaaggacatcatgagagctccctgtgacatcacaggccagtttgagaagtgggaggcg
gccgagacggagctcaacaacagtttctacgacaggaagtgcggcgtgcacgcggcgctg
tgcgacaacgtggacacgcgcggcgccgtggaggagatgcgcgtgctggtcggccatagc
aacggatacatcgccaacaggaagggcgccaagctgaagcccaaccgcatgctgctggag
agcatcgccctgtacctcacgggcatgctgaaggtgtttggggccatcgagggatcggag
cccatcgggttccccatgggggggcggagccagagcgctgacctggagagcaccgtgatg
ccatacctcagcgtgctgtccaacttcagagaaggcgtccggaagatcgcccgcgagcag
aaagtgacggagttgctgcagctgtgcgacgtcgtccgtgacgacacgttaccggagctc
ggcgtccggctggaggaccacgaaggtctgcccaccgtggtgaagctggtggacaaggag
acattgttgaaggagaaggaggagaagaagcagatggaggctgagaagaagaggaagaag
gaggaagccgccaggaagaagcaggagcaagagatggccaagctggagaagatgaagctt
cctccaggggagatgtttcgctcaggcaccgataaatactccaaatacgacgacacgggt
ttcccgacccacgacgcagagggcaaggagctgagcaaaggtcaagccaagaagctgcgg
aagctgttcgaggctcagaagaagctccacaacgagttcctccagaggagccgacaagga
cactga
DBGET
integrated database retrieval system
