Pseudoliparis swirei (Mariana hadal snailfish): 130193077
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Entry
130193077 CDS
T09868
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130193077 (pax6b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130193077 (pax6b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
130193077
NCBI-ProteinID:
XP_056269373
LinkDB
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Position
4:complement(9080226..9101394)
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AA seq
457 aa
AA seq
DB search
MPQKEYHSHATWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHDEVQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATP
EVVAKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADG
MYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQEGCQPQEGAGENTNSISSNGEDSEETQ
MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR
RAKWRREEKLRNQRRQANNSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSAL
ANSYNALPPMPSFTMANSLSMQPSQASSYSCMLPTSTPVNGRSYDTYTPPHMQAHMNSQS
MTASGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaagaataccacagccatgccacgtgggagtctggcgtagcctcaatgatg
cagaacaaggtgtatgacatctgtgatgaaggtcacagtggcgtaaaccagcttggtggt
gtgtttgttaatggtagaccgctgccggattccaccaggcagaaaatagttgaactcgct
cacagtggtgctcgaccctgcgacatctccaggatactgcagacccatgatgaagtccaa
gtgctggacagtgaaaaggtatctaacggctgtgtgagcaagatcctgggccggtattat
gaaactggctccataagaccgagagcaataggcggcagcaagcccagggttgccactcca
gaggtggtcgcgaaaatcgctcagtacaagcgggaatgtccgtctatcttcgcgtgggag
atccgtgacaggctgctttcggagggggtctgcaccaacgacaatatacccagtgtgtca
tcgataaacagagtcctccgcaacctggcaagtgaaaagcaacagatgggcgcagatggc
atgtatgacaagctgagaatgctcaacggtcagacaggaacttgggggacccggcccggc
tggtaccccggaacatcagtgccagggcagcccaaccaagagggctgccaaccacaagaa
ggcgcaggagaaaacacaaactccatcagctcgaatggggaggactcagaggagacacag
atgagactgcagctcaagaggaagctacagaggaaccgcacgtccttcactcaggagcag
attgaagccctggaaaaagaatttgaaagaactcattatccagatgttttcgcgagagag
agactagcagcgaaaatcgacctgcccgaagcaagaatacaagtatggttctcaaataga
agagcaaagtggaggcgagaggagaagctgcggaaccagcgccggcaggccaacaactca
tccagtcacatccccatcagcagcagcttcagcaccagcgtctaccaggccatcccacag
cccactacaccggtgtctttcacctcggggtcaatgctgggtagacccgactctgctctg
gcgaacagctacaacgcgctgccccccatgcccagcttcaccatggcaaacagtctatct
atgcaacccagccaggcctcctcttattcctgcatgctgcctaccagtacgcctgtgaat
gggcggagctacgacacatacacgccccctcatatgcaggcacatatgaacagccaatca
atgaccgcttctggtaccacctcaacaggactcatctctcctggagtgtctgtccctgtc
caagtcccagggggtgagcctgacatgtctcagtactggtcaagactacagtag
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