Pseudoliparis swirei (Mariana hadal snailfish): 130193113
Help
Entry
130193113 CDS
T09868
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130193113 (irx6a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130193113 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130193113
NCBI-ProteinID:
XP_056269430
LinkDB
All DBs
Position
4:complement(2385606..2390984)
Genome browser
AA seq
497 aa
AA seq
DB search
MHLHRSSVSDGTGGSQTAAAAAAAAAAASSFCCPSSYQNRLLHASSRTELNAALGMYSSP
YAAAAAASQNYANYFPYSTDPSALYSTLNPQYDIKDGTGALHSGITQTAAAYYPYDHSLG
QYQYDRYGTVDFDGTARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQ
VSTWFANARRRLKKENKMTWSPKNKATDDRKDDSDKADDRDRVAKDSSDCKEEKDLHLSD
LEDMEEEEEEEEEDKLDSDCEKAAAPDEHDLQRVMAAASGGPQKRDRASELHMSSTNGFH
AFPCGVKAVGALLHPPPPPPPPPPLPPPLTSHFLDPALSKALSSSSAAAAGTLSLSHFEA
SEKPRIWSLARTAASGVVLSAQQQQRGSEPRTCGDLTADCRLQNAGLAMRGLHGSGPEGP
FPEGPFPEGPSPHSKVYGSYGHKDLRLHCSSYSGLPDSCRFSSVEGFSGGKAAPRSPDLS
EARGSDEVTAFRPVMKR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttcacaggtcgtcggtctctgatgggacaggcggctcccagaccgccgccgcc
gccgccgccgccgccgccgccgcctcctccttctgctgcccgtcgtcctaccagaaccgg
ctcctgcacgcgagcagccggacggagctgaacgcggcgctgggcatgtacagctccccc
tacgccgcagcggctgccgccagccagaactacgccaactacttcccctacagcaccgac
ccgtcggctctctactccactctgaaccctcagtatgacatcaaggacggcacgggcgct
ttacactccggcatcactcagacggctgcagcgtattacccgtacgaccactcgctggga
cagtaccagtacgaccgatacggcactgtcgacttcgacggcacggcccggagaaagaac
gccactcgtgaaaccaccagcaccctgaaggcctggctgtacgagcaccgcaagaacccg
tacccgaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccag
gtgtccacctggttcgccaacgcgcggcggcggctcaagaaggagaacaagatgacctgg
tcgccgaagaacaaggccaccgacgacaggaaggacgactcggacaaggccgacgaccga
gaccgcgtcgccaaagattctagcgactgcaaggaggagaaggatctgcacctgagtgac
ctggaggacatggaggaggaggaggaggaggaggaggaggacaagctggacagcgactgt
gagaaggcggcggcgcccgacgagcacgacctccagagggtcatggcggcggcgtccgga
ggccctcagaagagagaccgcgcctccgagctgcacatgagctcaaccaacggcttccac
gcgttcccctgcggcgtcaaggccgtcggcgccctcctccatcctcctcctcctcctcct
cctcctcctcctcttcctcctcctctcacgtcccacttcctggatcccgcgttgtccaag
gcgctgtcgtcgtcgtcggccgccgccgcgggaactctgtccctgtctcacttcgaagcc
tcggagaagcctcggatctggtctctggctcgcacggcggcgtcgggggtcgtcctgagc
gcccagcagcagcagcgcggctcggagccgaggacgtgcggcgacctcaccgccgactgc
cggctccagaacgccgggctcgccatgaggggcctccacggatctggccccgagggcccg
ttccccgagggcccgttccccgagggcccgtccccgcactcgaaagtctacggcagctac
ggccacaaagacctccgactgcactgctcctcctactccggcctcccggactcgtgccgc
ttctcctccgtcgaaggattctccggcggcaaagcggcgccgcggtcgcctgacctcagt
gaggcccgcgggagcgacgaggtcacggcgttcagaccggtgatgaagaggtga
DBGET
integrated database retrieval system
