Pseudoliparis swirei (Mariana hadal snailfish): 130193206
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Entry
130193206 CDS
T09868
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130193206 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130193206 (efl1)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
GTPases
130193206 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130193206
NCBI-ProteinID:
XP_056269612
LinkDB
All DBs
Position
4:26473477..26525949
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AA seq
1128 aa
AA seq
DB search
MGLSSLDKIIALQRNPANIRNVCILAHVDHGKTTLADCLVATNGIISSRLAGKVRYLDSR
EDEQIRGITMKSSAISLHYRNGDQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIIVLDAV
EGVCPQTQVVLRQAWLEDIRPVLVINKIDRLIMELKLTSQEAYSHLQKILEQVNAVTGSL
FTSKVLKERAEKEEEEEKKKKDGKTLSGDQVYDCSAMLEEADDSQLYFSPDQGNVVFASA
TDGWGFSIQQFAQIYSQKMGIKTEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKPLFVQLV
LDNIWSLYDAVVTRRDKEKVEKMVTSLGVKVLARDLRHSDPKVLLSAICSQWLPVSQAVL
LMVCEKLPSPLEIAAGRVEKLMSVGARRFDSLPEQTQELKRAFLQCSSGEKDPLIVFVSK
MFAVDTKALPHNRQRPLTQEEIAQRRELARQRHADSRAADQKGPTHSERTPQEGPPARLD
TELWRKAGPNAQKSQMESRTLKDSKPEEEEEHQTFIAFARVFSGVAKKGQKVFVLGPKYD
PAQALSMLPEGVSASDCVSEVPHLSCCTMESVYLLMGRELEELEEVPVGNVLGIGGLEDS
VLKSATLSTSPACPPFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLI
QETGEHVLVTAGEVHLQRCLDDLRDRFAKIEISASKPIIPFRETVIRPPKVDMVNEDLGK
QQKVAIIHQVKEGRSSATLHVDSGGLVTLTTPNRLATVSIRAIPLPQEVTSLLERSAELI
RTLEQINMSLREGKSLDISQRTLEAIIGLKTQLESLLQGRKWRNAVERVWAFGPRRIGPN
ILLNSVEGYQRPSVWQCLGKAGAQAAALRDLDNSIVSGFQLATLAGPMCEEPLMGVCFSV
EKWDIQSSAPSRHKDSLEEDSISHGTLEDSKVEGSSEPLEEGETAGPIQARRRPEAASVD
CYGPVSGQLIAAMKEACRHAFQTQPQRLMVAMYTCEIMATADVLGRVYGVLGKREGRVLH
EEMKEGTDMFIIKAVLPVAESFGFADEFRKKTSGLASPQLVFSHWEVISSDPYWVPTTEE
EYLHFGEKADSANQSLKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgggactctccagcctggataagatcatcgcactgcagagaaaccctgccaacatcaga
aacgtgtgcatcctggcacacgtggaccacggcaaaactactctcgctgactgcttagtg
gcaactaatggtatcatatcaagtcgactggctgggaaggtgaggtatctagacagcaga
gaggatgaacagatccgaggaatcacgatgaagtccagtgccatctctctgcattacaga
aacggcgaccaggaatacttactaaacttgatcgactctcctggtcacgtcgacttctcc
tcagaagtgtccactgctgtccggctgtgtgatggtgccatcatcgtgctggatgctgtg
gagggagtgtgtccacagacccaggttgttctgcgtcaagcgtggctggaggacatcagg
cccgttctggtcatcaataagatagaccgacttatcatggagctgaaactcacgtctcag
gaagcttactcacatctgcagaagatcctggaacaggtgaatgcagtgacggggtctttg
tttacgtccaaagtgctgaaggagcgagcggagaaagaagaagaggaggagaagaagaag
aaagacggcaagactttgagtggagaccaggtttacgactgcagcgccatgctggaggag
gctgacgactctcaactctacttttctcctgaccaaggaaatgtggtctttgccagcgcc
acagatggatggggattcagcatccagcagtttgcccaaatctacagccagaaaatgggt
atcaagacagaggtgctgctcaaaaccctgtggggagatttctacctcaatgcaaaagca
aagaagatcatgaaaggagctcaggccaaaggaaagaagccgctgtttgtgcagcttgtg
ctggataacatttggagtttatatgacgcagttgtcacaaggagagacaaggagaaggtg
gagaaaatggtcacatcactgggggtaaaggttctggccagggacttgcgtcactccgac
cccaaagtcctcctctctgccatctgcagccagtggttacccgtgtcccaggctgtccta
ttgatggtgtgtgagaaactgcccagtcccttagaaatagcagcagggagggttgagaaa
ctgatgagcgttggagcgcgacgatttgactcattgcctgaacagacgcaggagctgaaa
agagcgttcctccaatgttccagtggagagaaagatccgctcattgtctttgtgtccaag
atgtttgctgtggacaccaaggccttgcctcataacagacagaggccgctgactcaggag
gagatcgcccagcgcagggagttggcaagacagagacatgctgacagcagggcagctgat
cagaaaggccccacccactccgagaggacaccacaggagggtccacctgcacgacttgac
acagagttgtggagaaaggctggaccaaatgctcaaaaaagtcagatggagagtcgaaca
ctgaaagactcaaagccagaggaggaagaggagcaccagaccttcattgcgtttgcgcgg
gtcttcagtggagtggcgaagaaaggacagaaagtatttgtactgggaccaaagtatgac
cccgcccaggccctcagcatgctgccagagggtgtcagtgcttcagactgtgtttctgag
gtgcctcatctgtcctgctgtaccatggaaagcgtctatctgctgatgggaagagagcta
gaggagttggaggaggtgcctgtaggaaatgtgctgggtatcggcggtctggaggacagt
gtcttgaagtcagccaccctgtcaacatcccctgcctgcccacccttcaccccgctcaac
tttgaggccacacccattgttcgggttgccatagaacccaaacatccaagtgagatgcca
aagctggtgcgtgggatgcgtctgttgaaccaggcagatccctgcgctgaggttctgatt
caggaaacaggagaacatgtgctcgtcactgctggtgaggttcatctccaacgctgcctg
gacgacctcagagaccggttcgctaaaattgagatcagcgcctccaagcccatcatccca
ttcagagaaacagtgatacgtcctccaaaagtggacatggtgaatgaagacctgggcaag
cagcagaaagtagccatcattcaccaggtgaaagaaggtcgttcatctgccaccctgcat
gtggactcaggtggcctggtcaccctcaccactcccaaccgactggccacagtcagcatc
cgagcaatcccgctgccacaggaagtgaccagtctgttggagagaagtgcagagctgatt
cgaaccctggagcagataaacatgtccctgagggagggaaagagtctagacatcagccag
aggaccctggaggccatcattggactcaagacccagctggagagtctgctgcaggggagg
aagtggaggaatgctgtggagcgggtctgggcctttgggcctcgcagaattggtcccaac
attctgctaaacagtgtggagggctaccagcggccctcggtgtggcagtgtttgggtaaa
gctggagctcaggctgcggctctacgagacttggacaacagcatcgtcagcggcttccag
ctcgccactctggcggggccaatgtgtgaggagccactgatgggagtttgcttctctgtg
gagaagtgggacatccagtcttcagccccgtcacgacataaggactccttggaggaggac
tccatatcccatgggactttagaagacagcaaagtggagggaagcagtgagccacttgag
gagggcgagacggcagggccgatccaggccaggcgcaggccagaagctgcatcagtagac
tgctacgggccggtctcaggccagctgattgctgccatgaaggaggcgtgccgtcacgct
ttccagactcagccccagagactcatggttgcgatgtatacctgcgagataatggctacc
gctgatgtgctgggccgagtgtatggtgtactggggaagcgagagggtcgcgtcctccat
gaagagatgaaggaagggaccgacatgttcatcatcaaggccgttctgcctgtggctgag
agctttggatttgcagacgagttccgcaagaagaccagcggcttggccagtccacagctg
gtcttcagccactgggaggtgatcagcagtgatccatactgggttcccaccacagaggaa
gaatacctgcacttcggggagaaagccgactctgcaaaccagtccctaaaatacatgaat
gctgtccgccgccgcaaaggcctctacgtggaggagaagatcgtcgagcatgcagagaag
cagagaacactcagcaagaacaagtag
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