Pseudoliparis swirei (Mariana hadal snailfish): 130193244
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Entry
130193244 CDS
T09868
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130193244 (cdhr5a)
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Cadherin related
130193244 (cdhr5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130193244
NCBI-ProteinID:
XP_056269668
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Position
4:32689162..32695854
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AA seq
663 aa
AA seq
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MDISVTLVFTYSPITVPENNTADLQLVTIVSVSDAALSISVNPEDLFYLKGNALMVKKGL
DYESLPSAALVVWVQCSKVGFSSVNESVEVLVENENDNPPNFAQSHYVLEVNELIPVNSS
VGLIEASDVDSEPLFYRLEPATDKYFRLENINSPKIIVKSLLDYDVVQKISLVLHVQDTL
DGSASDKPFFTSVASITVQVKDVDNRPPWFQPCLRTSSGNAKLCVSTGYRGKVNLTEKED
GPLVLDPGPVFAKDGDKNRSEQISYRILRGNEGNIFQIDEKTGNISMAKAANIAGPIALI
VMASQVTNRDQFAVTQVTVEVMKKSRNPPRFERERYEGFIYSNSVPESMILRDRSTNRPF
RVRARDEDFAAGANPDLKYEVQYSSYVNVTSDGFVILKRVVKTESFALQLRAVDTATGEF
GTAALSVQVIPAVAAPSPSSIGYRPGDMALLGLVMAALLVLCLIVIGFLLSRLWKGNAGV
DKICECLGPCLKSDQHQSGHRDSLQYTNDGFQTEADQARWGGRRRNNTYPQAGGRVIPME
RRSRHCSSCGVHTNHTGSPSRRTRGGGAAAADEEYAKRALRAKQRRKEGQKAVWFKEIGD
SSDIEVEIIPDAARPVEEETEELEAEGGGAVRDPAAPVREESQSAAGGGGEEEEETGKGG
QEA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggatatctctgttacacttgtgttcacgtatagccccatcacggtcccagagaacaac
acggccgacctccagctggtgaccatcgtctccgttagcgacgcggcgctgagcatctcg
gtgaaccccgaagatctgttctacctgaaggggaacgccctgatggtgaagaagggcctg
gactacgagtcgctgcccagtgcagctctggtggtctgggtgcagtgcagcaaggtcggc
ttcagctccgtgaacgagtctgtggaggttctggtggaaaacgagaacgacaaccctccc
aactttgcacaaagccactacgtcctggaggtgaacgagctcataccagtgaactcgagt
gtcggactgatcgaagcatcggacgtcgattcagagccgctgttctaccgcttagagccg
gccacagataaatatttccgtctggaaaacatcaactctccaaagataatcgtgaaaagc
ctcctggactacgacgtggtgcagaagatctctctggtgctacacgtgcaggatacgctg
gacggctcggcctccgacaagcccttcttcacctccgtagcctccatcacggtgcaggtg
aaggacgtggataaccggcccccgtggttccagccttgtctaaggacgagctcgggaaac
gccaaactgtgtgtgagcaccggctaccgaggcaaggtcaacctcaccgagaaggaggac
gggcccttggtgctggatcccggtccggtgttcgccaaggacggagacaagaaccggagc
gagcagatcagctaccggatcctccgaggaaatgagggaaacatcttccagatcgacgag
aaaacgggaaacatctcgatggcgaaggccgccaacatcgccggcccgatcgctctcatc
gtcatggcgtcgcaggtcaccaacagggatcagtttgcggtgacgcaggtgacggtggag
gtgatgaagaagagcaggaaccctcctcgcttcgagagggagcgctacgaaggcttcatc
tacagcaactcggtccccgagagcatgatcctccgggaccgcagcaccaaccggcccttc
agggtccgggcgcgcgacgaggacttcgccgccggtgcgaacccagacctgaagtacgag
gtccagtacagcagctacgtcaacgtgacctcggacgggttcgtgatcctgaagagagtc
gtgaagacggagtccttcgcgcttcagctccgagccgtggacacggcgaccggagagttc
gggaccgcggcgctttctgttcaggtcattccagcggtcgccgccccctccccctccagc
atcgggtaccggcccggcgacatggcgctgctgggtctggtgatggcggcgctgctggtg
ctctgcctcatcgtcatcggcttcctgctgtcccgcctgtggaagggcaacgccggcgtg
gacaagatctgcgagtgcctgggcccgtgcctgaagtcggaccagcaccagtccggccac
agggactcgctccagtacaccaacgacggcttccagaccgaggccgaccaggcccggtgg
ggcgggcggcgccggaacaacacctacccccaggcgggggggcgggtcatccccatggag
aggcggagccgccactgctcctcctgcggcgtccacaccaaccacacggggagcccctcc
aggaggacccgggggggcggagccgccgccgccgacgaggagtacgccaagcgggcgctc
cgggccaagcagaggaggaaggagggccagaaggccgtctggttcaaggagatcggcgac
tcctccgacatcgaggtggagatcatcccggacgccgcgcgccccgtggaggaggagacg
gaggagctggaggcggagggcgggggcgccgtcagggacccggcggccccggtgagggag
gagagccagagcgcggcgggggggggcggcgaggaggaggaggagacagggaagggaggc
caggaggcctga
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