Pseudoliparis swirei (Mariana hadal snailfish): 130193254
Help
Entry
130193254 CDS
T09868
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2-like
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
SAM_2
Ank
Ank_4
Ank_5
SH3_2
PDZ
PDZ_6
FERM_f0
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
130193254
NCBI-ProteinID:
XP_056269678
LinkDB
All DBs
Position
4:complement(34071417..34181571)
Genome browser
AA seq
1743 aa
AA seq
DB search
MRKHFRGDGSELLNSLVVRVLVPDLQQTKCVRFNPEATVWVAKQRILCTLTQNLKDVLNY
GLFQPAGGGRDGTFLDEERLLREYPQPIREGVPSLEFRYKSRIYKQPDVDEKQIAKLHTK
GNLRRFMDLIHHNQVDEVLKLLEDGFDPNYHDGDTGESPLTFTAHLDGVAELLQVLSSGG
AHLDFRARDGMTALHKAARSQNQAALATLLQLGASPDLRDDPGCCQLLLSHNATLECEDE
NGWHEAHQACRHGHVQHLEHLLFYGADMSAQNASGNSALHICALYNQDNCARVLLVRGAD
KEVKNYNNQSPVQVAITAGNFELAELVKNHKETDIVPFREAPPPSRRRRAPSSGAADRAP
SSLSAPRVLLRSNSDNNLTVSHQQRGAAPPLQPPPPRGPRPGSSAPRRSLSPQLLQLMPG
GSPNGNVVVRTMGRGGRGGRSRSPSLSRLGEEARRAPPIQRQPSEAGAARRKLYSAVPGR
HFVVVRPHIAQAEGEVTLYKGDRVKVLSIGEGGFWEGSARGLLGWFPSDCVEENPIKATE
ERSYSRADRRKLFRHYTVGSYDSFEASSDCVADEKTVVLQKKDDEGFGFVLRGAKADTPI
EEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNQDNVVKVGHRQVVNMIRHGTN
RLLIKVVTVSRNPEPDDTARKKAPPPPKRAPTTALSMRSKSMTSELEELDKVEEMALAQK
ASPGDARVASIKPRPSSRCLATADLNSMYHDRQGVAVLPPSAPGAFLGLPEKNTLKKQKS
IDTTEEQGFLTPPLLKFARSLSMPDTSEDIPPPPASSPPSPPDYSSGPTAKGYGTTRPSF
MQNSPNAVKTIGRTADAGTLRRGYFRQSSEQFESTCVRGRAPVPENPYSELGNRTLYVPA
KPARRKGVLVKQPNVEDSPEKTCRAPADPSAAVSTPTERTCSSIAIPTIIVKEPSTSSSG
KSSQGSSMEIEPATPEHPPLSPGGGGLRPEGPMSPGNPFAAAIAGAVRDRERRLEARKHS
GAFQSIDMGDDDLGGPAPTPQLRQSKSIDEGMFGNDERLRRILGPSLQLGPPVGGGSGNM
TDFNTPEPTVVREPLNTRTGQCPNLDSPVSLPATPPKSHYRANGTYLHPVTGKPLDPNSP
LALALAARDRAMSEQQNHPQNPPRVQHEAQSLPHQPSHKPDLDQPLFIDTKLRSRIETSF
AAISSATVGRPGRGALRRQMTEQKYESDGPREERRHRPVEERKSAPADVTDASQPKSAGL
LMVHTCNEAGGNGHHPEGEGPDSNRPSELKDTNQPEPLHAATPGADPQLATSQRRSIPVG
ESMEEPVKLPFRMPPPPLASVDIDDDFDFTEPLPPPLEFANSIDIPDDAIAEMLLQQRRN
GGPSLPPYHPHAPPPVMDLHRRAAHSPPPSYPPPPPDSESGLGDSGMEEAGSSGDPQLST
LSSEGGFCDGALESLYAAADGHAFLVDRPPVPPKPKGKSVLHRTSLYHDALIEEPPESYG
SPPQAPPPMTSEPPRTPTQRTSKLWGDQPPELRSPPSTPDPKNTVITELSSILQQMSRDR
PPRPAESPASSTGARAGSGTRPPSDDSGVRSNAAAPLASTPPGSLPSRPHAGSPPDSGSS
LTPCSSLPPSASASLADVFGLATPPVGGGAYSSRSPSPLTLLQQAAAAGRPFAAAPVELW
SKHDVADWLESLNLGEHRDAFLDNEIEGAHLASLQKEDLIDLGVTRVGHRMNIERALKTL
QDR
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacacttcagaggagacggctcagagcttctcaactcgctggtcgtcagggtc
ctagtgcccgacctgcagcagacgaagtgcgtgcggttcaacccggaggcgacggtctgg
gttgctaagcaacggatcctgtgtacgctgacccagaacctgaaggacgtgctgaactac
ggactcttccagccggccggcggcgggcgtgacgggacgttcctggacgaggagcgcctc
ctccgagagtaccctcagccaatcagagagggcgtcccgtctctggagttccgctacaag
agtcgaatctacaagcaacccgacgtggacgagaagcagatcgccaagctgcacaccaag
ggcaacctgaggaggttcatggacctcatccatcacaaccaggtggacgaagtgttgaag
ctgctggaggacggctttgaccccaactaccacgacggggacactggtgagagcccgctg
accttcaccgcccacctggacggcgtggcggagctcctccaggtgctgagcagcggagga
gctcacctggacttcagggcccgggacggcatgacggcgctccacaaggcggcgcgctcc
caaaaccaggcggcgctcgcgacgctgctgcagctgggcgcctctccggacctgagggac
gacccgggctgctgccagctgctgctgagtcacaacgccacgctggagtgtgaggacgag
aacggctggcacgaggcccaccaggcttgccgtcatggtcatgttcagcatctggagcat
ctgttgttctacggcgccgacatgagcgcccagaacgcgtcggggaactccgcgctgcac
atctgtgccctgtacaaccaggataactgtgccagggtgctgctcgtccgtggagccgac
aaagaagtgaagaactacaacaaccagagtccggtccaggtcgccataaccgctggaaac
tttgagctcgccgagctcgtcaagaaccacaaggagacagatatcgtgcctttccgcgag
gccccgcccccctccaggcgccggcgggctccttcttctggcgccgccgaccgggccccc
tcctcgctgtcggcgccgcgggtcctgctgcgctccaacagcgacaacaacctgacggtc
agccaccagcagcgcggcgccgccccccccctgcagccccccccgccccggggcccccgg
cccggctcctcggcgccgcgccgcagcctgtcgccccagctgctgcagctgatgcccggc
ggcagccccaacggcaacgtggtggtccggaccatggggagggggggccggggggggcgg
agccgctcgccctccctcagccggctgggggaggaggcccggcgggccccgcccatacag
cgccagcccagcgaggccggcgccgcccggaggaagctgtacagcgccgtccccggccga
cacttcgtggtggtccggccccacatcgcccaggccgagggcgaggtcaccctctacaag
ggcgaccgggtcaaagtcctgagcatcggggagggggggttctgggagggcagcgcccgc
ggcctgctgggctggttcccctccgactgcgtggaggagaaccccatcaaggccaccgag
gagaggagctactcccgggccgaccggaggaagctcttccgacactacaccgtgggctcc
tacgacagcttcgaggcctccagcgactgcgtcgcagacgagaagacggtggtgctccag
aagaaggacgacgagggcttcggcttcgtgctgcggggggccaaagcggacacgcccatc
gaggagttcactcccacccccgccttccccgcgctgcagtacctggagtccgtggacgag
ggcggggtggcgtggcaggccgggctccggaccggggacttcctcatcgaggtgaaccag
gacaacgtggtgaaggtgggccaccggcaggtggtcaacatgatccgtcacgggaccaac
aggctcctcatcaaggtggtgacggtcagccgcaacccggagcccgacgacacggcccgc
aagaaagcccctccccctccaaagagagcccccaccacagccctgtccatgcgctccaag
tccatgacctccgagctggaggagctggataaagtagaagagatggcgctcgcccagaag
gcctcgccgggcgatgccagggtcgcctccatcaagccgcggccgtccagccgctgccta
gcaacggccgacctcaactccatgtaccacgaccggcagggcgtcgccgtgctgccgccc
tcggcgcccggggccttcctggggctccccgagaaaaacacactgaagaagcagaagtcc
atagatacgacggaggagcagggattcctcacgcctcctctgctgaagttcgcccgcagc
ctctcgatgcccgacacctcggaggacatcccccctcccccggccagttcccccccctcg
ccgcccgactacagctccggccccacggccaaaggctacggcaccacgcggcccagcttc
atgcagaactcgcccaacgcggtgaagaccatcggccggaccgcggacgccggcaccttg
aggcgaggctatttccggcagagctcggagcagttcgagagcacgtgcgttcggggccga
gcgccggtgccggagaacccgtactccgagttgggcaacaggaccctgtacgtgccggcc
aaaccggctcggaggaagggcgtgctggtgaagcagcccaacgtcgaggacagtcccgag
aagacgtgccgcgcgcccgcagacccctcggccgccgtgtccacgcccaccgaacgaacg
tgctcctccatcgccatccccaccatcatcgtcaaggagccctccaccagcagcagcggc
aagagcagccagggcagcagcatggagatcgagcccgccacccccgagcacccgcccctc
tcgcccggtggtggcggactgcgtcccgaaggcccgatgtctcccggcaacccctttgcg
gcagcgatcgccggggcggtccgggaccgggagaggaggctggaggccaggaagcactcc
ggtgccttccagtccatagacatgggggacgacgacctgggcggtcccgcgccgacccct
cagctgcgccagtccaagtccatcgatgaaggcatgttcggcaacgacgagcggctccgg
aggatattgggtccctctctgcagctcgggcccccggttgggggcggtagcggcaacatg
accgatttcaacactcctgagcccacagtggtccgggagcctctgaacaccagaaccggc
cagtgtcccaacctggacagtcccgtcagtctaccggccacgccccccaagagccactac
cgggccaacgggacctacctccatccggtcaccggcaagcccctggacccgaattctccg
ctggctctggccctggcggctcgtgaccgggcgatgagcgagcaacagaaccatcctcag
aaccctcctcgggttcagcacgaagcccagtccctcccgcatcagcccagccacaaaccg
gatctggaccagccgctgttcatcgacacgaagctccgctccaggatcgagacgagtttt
gccgcgatctcctcggccaccgtgggccggcccggccgaggcgctctccggaggcagatg
acggagcagaagtacgagtcggacgggccgcgggaggagcgccggcaccggccggtcgag
gagaggaaaagcgcgccggcggacgtgacggacgcatcgcaacccaagtcggcggggctg
ctgatggtgcacacctgcaacgaagccggcggcaacgggcaccacccagagggggagggg
ccggacagcaaccggccgtccgaactgaaggacaccaaccagccggagccgctccacgcc
gccacgccgggcgccgatccccagctcgccacatctcagaggaggagcatccccgtgggc
gagtccatggaggagccggtgaagctgcccttccgtatgccccctcccccgctggcctcg
gtggacatcgacgacgattttgacttcacggagcccctccccccaccgctggagtttgcc
aacagtattgacatccccgatgatgccattgcagagatgctgctgcaacagagacggaac
gggggtccctcgctcccgccgtaccaccctcacgcccccccgcccgtcatggacctacac
agacgggcggcgcacagcccgcccccctcataccctccccccccaccggactctgagtcg
gggctgggggattcgggcatggaggaggcgggcagcagcggggatcctcagctctccacg
ctgtcgtcagaggggggcttctgcgacggcgctctggagagcctctacgccgccgcggac
ggacacgccttcctggtggatcggccccccgtgccccccaaacccaagggcaagtccgtc
ctccacaggacgtcgctgtatcacgacgctctcatcgaggagcccccggagtcctacggg
tcaccgcctcaggcccctccccccatgacctctgaacctcctaggactcccacgcaaagg
acatccaagctgtggggcgatcagccccccgagctgcgcagccctccgtccacaccggac
cccaagaacaccgtcatcaccgagctgagctccatcctgcagcagatgagccgcgacagg
ccgccgcggccggcagagagccccgcctcctcgacgggggccagggccggctccggaacc
aggccgccctcggacgactcaggggtgcgtagcaacgccgccgccccgctggcctccacg
ccgcccggcagcctcccgtcccggccgcacgccggcagccctccggactccggctcctcc
ctcacgccgtgctcctcgctgccgccctccgcgtcggccagcctcgccgacgtcttcggc
ctggccacgccccccgtgggcggcggcgcctacagctcgcgctccccgtcgccgctcacg
ctgctgcagcaggcggcggcggcggggaggcccttcgccgccgcgcctgtggagctgtgg
agcaaacacgacgtggcggactggctggagagcctgaacctcggcgagcaccgcgacgcc
ttcctggacaacgagatcgagggcgcccacctggcctcgctgcagaaggaggacctgatc
gacctgggcgtgacccgggtgggccaccgcatgaacatcgagagggccctgaagacgctg
caggacagatag
DBGET
integrated database retrieval system
