Pseudoliparis swirei (Mariana hadal snailfish): 130193266
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Entry
130193266 CDS
T09868
Symbol
tle3b
Name
(RefSeq) transducin-like enhancer protein 3-B isoform X1
KO
K04497
groucho
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130193266 (tle3b)
04330 Notch signaling pathway
130193266 (tle3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130193266 (tle3b)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
130193266 (tle3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_IFT122_1st
HALZ
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
130193266
NCBI-ProteinID:
XP_056269689
LinkDB
All DBs
Position
4:28337502..28366600
Genome browser
AA seq
710 aa
AA seq
DB search
MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELN
AIIGVRGLPNLPLTQQQPPHSVYPAFMQQQLQAQHLSHAAHGPQVQLPPHPSGLQPPGMP
PVTGAGSGLLALGALGSQAHLPVKDEKNHHDLEHRGPSSFHLPLANSLKERESSTNNSVS
PSDSLRAASEKHRGSSDYSLDSKKRKVDDKDSMGRYDSDGDKSDDLVVDVSNEDPATPRV
SPAHSPPENGLDKSRVLKKDAAPNSPASVASSGSTPSSKAKDHAHNDKSSTPSLKSNTPT
PRNEAPTAGTSTTPGLRPLTMGKPPGLEALAAPALRTPLSIAGSYASPFAMMGHHEMNGS
LTSPGVYPGLISPQMSAAAAAVAYGRSPIAGFDPHSHMRAPGLPASLTSISGGKPAYSFH
VSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTRHVYTGGKGCVKI
WDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLASQTPRIKAE
LTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGT
KLWTGGLDNTVRSWDLREGRQLQQHDFTSQVERRRVSSCVCVCVCARTDE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtatccacaaggccggcatccggcacctcaccagccagggcagcctggcttcaagttc
actgtggcggagtcctgtgacaggatcaaagacgaatttcagttcctgcaggctcagtac
cacagtctaaaggtggagtacgataagctggccaatgaaaagacggagatgcagcgtcac
tatgtcatgtactatgagatgtcctatgggctcaacattgagatgcacaaacagactgag
atcgccaaacgtctcaatgcaattctggctcagatcatgccgttcttatcacaagagcat
caacagcaggtggctcaggctgttgagcgggccaagcaggtcacgatgactgagctgaat
gcgatcatcggggtacgtggacttcccaatctgcctctcactcagcagcagccgcctcat
agtgtctacccagccttcatgcagcagcagctccaggctcagcatctctctcacgccgcc
cacggcccccaggtgcagctgcccccccacccctccggcctgcagccgcccggcatgccc
cccgtgacgggcgccggctccggcctgctggctctgggcgctcttggcagccaggcccac
ctgcctgtgaaggatgagaagaaccaccacgacctggagcaccgaggcccctcatctttt
cacttgcctctggccaactctctgaaagagcgtgagtcgagcacgaacaactcggtgtcg
ccatcggacagcctgcgggcagcgagtgagaagcaccgcggctcttcagattacagcctc
gactccaagaaacgtaaagtggacgacaaagacagcatgggccgatatgacagcgacgga
gacaaaagtgacgacttggtggtggacgtctccaacgaggacccggccaccccgcgagtc
agccccgcccactctcctccagaaaacggcctggataaatccagagtcctgaagaaggac
gccgcccccaacagccccgcctccgtcgcctcctcgggcagcacgccatcctccaaagcg
aaggaccacgcccacaatgacaagtcgtccacgcccagcctgaagtccaacacgccgact
ccgaggaacgaggctccgacggcggggaccagcaccactccgggactacggcctctcacg
atgggcaaaccacccggcttggaggcactggcggccccggccctgcgtacgcctctctcc
atcgccggctcctacgcctccccgtttgcgatgatgggtcatcacgagatgaacggatcc
ctgaccagcccgggcgtctatccgggtctcatttcaccgcagatgagcgccgccgccgcc
gccgtcgcctacggacgctcgccaattgcggggtttgaccctcattcccacatgagagcg
ccgggcctgccagccagcctcacgtccatttctggagggaaaccagcgtattcttttcac
gtgagcgccgatggtcagatgcagccggtgcccttccctccagacgcactgattggcccg
ggcatcccgcgtcacgctcgccagatcaacacgttgagccacggggaagtggtgtgcgcc
gtgaccatcagcaaccccacgcgtcacgtctacaccggcggcaagggctgtgtcaagatc
tgggacatcagccagcccggcagcaagagccccgtgtcccaactcgactgcctgaacagg
gacaactacatccgctcctgcaagctcctgcctgacggccgcaccctgatcgtgggcggc
gaggccagcacgctgaccatctgggacctggcctcgcagacgccgcgcatcaaggccgag
ctcacgtcctcggcgccggcctgctacgcgctggccatcagccccgacgccaaggtctgc
ttctcctgctgctcggacggaaacatcgccgtgtgggatctccacaaccagaccctcgtg
aggcagttccagggccacacggacggagccagctgcatcgacatctcccacgacgggacc
aagctgtggaccggcgggctggacaacacggtccgctcctgggacctgagggagggccgg
cagctccagcagcacgacttcacctcccaggtagagcggcgcagagtctcgtcgtgtgtg
tgtgtgtgtgtgtgcgcgcggaccgatgagtga
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