Pseudoliparis swirei (Mariana hadal snailfish): 130193291
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Entry
130193291 CDS
T09868
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130193291
03037 Cilium and associated proteins [BR:
pswi03037
]
130193291
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130193291
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130193291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
130193291
NCBI-ProteinID:
XP_056269741
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All DBs
Position
4:26670269..26713925
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AA seq
1177 aa
AA seq
DB search
MSTVPEPLVGSSRYLSAAKRHKSIRKNSRRIYSAYQNHEQGSSDDDDKEEERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRVFYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHLTSAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLA
YFMVGMAVFAYSFIIVLRKMAKNSRMSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVERSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAVQVIPGNWSDSSSFLATISQPEVDSLSTLVSEISVSELRNSTIAT
IATMLNVRNTSTSSPGTFSNQTSLFEKNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASI
LLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPA
FNVMKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYR
PSQHCGPFSGQEKIYDIISETVVSDFPLWFNKVMSYVTSPVVVLPALLLLFMLIYYLQAI
ARSLKFTNSQLRMQLQTERTEDKKKVLMAAARLQAPEAAADKKPDQQESDITSQEPSINT
PSPQRNGSVTNISSPVRQGNSIRTITQSASRAHLNRGRVAGSAVRSPTVTILPKHRPEHI
PNRPPPFLVGPSGTCRSKSCHHMAYNPPARYSDNIHSDPLYRKSIRSIHPVEAAGIIAAQ
SYGGRRGHTTRYVIVNEHEPRKKLLRSSTRIPRHYLMEEPGEILELYPRNIKRYTPCTTQ
HQPHPHRSHPSHQHLSEEEEDEEEGKGRRRMVPGKAHRPQSLSDIHQPANFYIGDHVESH
VSFVKGAHTRARGRYGGQGDDEEENDEGEMHCGDLESNSRVQANVRGADSLLVRTRHHIH
SPDRHCQAQARTRRMESFVKPKTRPKMETTLTESDSASLASSSDQQNSSTDQYIQVIHNK
EQHLKTDVGQGKLAKKKSKTSFDPNVIESNDLVCSNV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgcctgagcctttggttggcagcagcaggtatctgtctgcagccaagagg
cacaaaagtatcaggaagaactccagaaggatttattcagcctatcagaaccacgagcag
ggctcctccgatgatgacgataaagaggaagagcgggtggacagcaacgatccagaggaa
atgttccagaacattcagtaccagaaggagatcatcgccaacattcggaccagaccatgg
ccaatgagacgcaagctcaaagtcttaaagcaggccagagagatcgttctgaagtacgag
ggtcgactcaccagaaccagaggttaccagactgcaggagctgatctgctgaagaaactt
tcacgtgtgttttacaacatcgtggttctgttcattccctgggaagtgaggatcaagaaa
atagaaagtcactttgggtcaggcgtggcctcctactttatattcctccgctggttgttt
gggatcaacattgtcctcaccatcatgactggagccttcatcgtcctaccagagcttctg
gctggagctccttttggaacaacaaggagtaaaactatccccaaggagcatctgacttca
gcccaggacctagacaccatatggtcccttgggggctatctgcagtactctgtgttattc
tatggttactatggcaggctgaggaaaattggcagtgcaggctaccggttgcccctcgcc
tacttcatggttggaatggctgtctttgcctacagtttcatcatcgttttaagaaaaatg
gccaagaactctcgtatgagcctggccagcgcctctgatgagaacttcacgttctgctgg
agagttttctgtgcttgggattacctaataggaaaccctgaggctgcagagagcaaagga
gcggccattgtcaacaacatcagggaagccatcgttgaagagcaggaaaagaagaaggat
accagtctggcagtcctcatcagtctgcgtatcttagccaacatcctggtgctcctgtct
ctggctggcagcatctacatcatctactttgtggtggagcgttctcagaagctagagcag
gagaagccggagctgacactttgggagaagaatgaggttagtgtggtggtttctcttatc
accatgattgctccgtctgcctttgagctggtgtctcaactcgagatgtatcacccacga
acttcgctgcgtttccagttggccagagtgcttgttttgtacctgggaaatctctacagc
ctcattatcgccctccttgataaggtcaacagtatgagctctgctgtccaagtgattcca
ggtaactggtctgactccagctccttcctggccaccatctctcagcctgaggtagacagc
ctctccaccctggtttctgagatctctgtctctgagcttcgcaacagtaccatagcaacc
attgccaccatgctgaatgttaggaacaccagcacaagcagcccagggaccttctccaac
cagacatctctgtttgagaagaacacccgctctcagcaggacccatgctgggagacctac
gttggacaggagatgctgaagctgtccatcattgacatgatcttcacggtggccagcatc
ctgctcattgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgg
gatttagaaagcaagtttcctgaatatggagaattcaaaatagcagagaatgttttgcat
ctgatttataaccaagggatgatctggatgggagcgttcttttctccctgtcttccagcc
ttcaacgtgatgaaactgattggtcttatgtatctgaggagctgggccgtcctcacctgt
aatgtcccccatcagcaggtgtttcgagcctccagatcaaacaatttctacttggctatg
ctgcttttcatgctgtttctgtgtatgctgcccaccgtctttgccatcgtgagatacaga
ccttcacagcactgtggaccattcagtggccaagaaaagatatatgacatcatctctgag
acagtggtcagtgatttccccctatggttcaataaagtgatgagttacgtcaccagccct
gtcgtagtgctaccagcactgctgctgctgttcatgttaatatactatctccaggccatt
gccagatccctcaaattcaccaacagccagctgagaatgcagctccagactgagcggacc
gaggacaagaaaaaagtcctgatggctgcagcgagattacaggctccagaagctgcagct
gacaaaaagccggatcagcaggagagcgacatcacgagccaggagccctccattaacact
ccatctccccaacggaacggcagtgttacaaacattagttctccagttcgtcaaggaaac
agcatccgcaccatcacccaatcagcatctagggcgcacctgaacagaggaagagtggct
ggatcagcagtcagaagtccaacagtgaccatactgcccaaacacaggccggagcacata
cctaacaggcccccaccctttcttgttggcccgagtggtacctgcagatccaagtcctgc
caccacatggcatacaatcccccagctcgctattctgacaacatccactctgaccccctg
tacaggaagtccatacgctccatacatccagtcgaggctgccgggatcatcgctgcacag
agttatggaggacggcgcggtcacaccacccgctatgtgattgtcaatgagcacgagccc
aggaagaagctgctacgctcgtccacacggatcccacgtcattacctcatggaagagcca
ggagagatccttgagctttacccacgcaacatcaaacgctacacaccctgcaccactcaa
caccagccacatcctcacaggtcccacccttcgcatcagcatctgagtgaagaggaagag
gatgaggaagagggaaaaggcagaagaaggatggtgccggggaaggctcatcgaccccag
tccctctctgacattcaccagccggcaaacttctacatcggggaccatgtagaaagtcac
gtgtcctttgttaaaggcgctcacactcgagctcgaggaagatatggagggcaaggagat
gatgaagaggagaatgatgaaggagaaatgcattgcggagatttagagtcaaattcacgg
gttcaggccaatgtgagaggagcagactcgctccttgtgcgaaccaggcatcacatccat
tccccagatagacactgtcaggcccaagccaggaccagacgcatggagtcttttgtgaaa
cccaagacaagaccaaaaatggagaccactctgaccgagtcagactcagcctccttggcc
tccagcagtgaccagcagaacagcagcactgaccagtacattcaggtcatccacaacaag
gagcaacatctcaagactgatgtcgggcaagggaagctggccaaaaagaagtccaaaacc
agctttgatccaaatgtcattgagtcaaatgaccttgtctgctccaatgtatga
DBGET
integrated database retrieval system
