Pseudoliparis swirei (Mariana hadal snailfish): 130193300
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Entry
130193300 CDS
T09868
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04217
Necroptosis
pswi04622
RIG-I-like receptor signaling pathway
pswi04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130193300 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130193300 (cylda)
04625 C-type lectin receptor signaling pathway
130193300 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130193300 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130193300 (cylda)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130193300 (cylda)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C67
130193300 (cylda)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130193300 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
130193300
NCBI-ProteinID:
XP_056269753
LinkDB
All DBs
Position
4:1030922..1050710
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AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGYREDWRFYMVVKECAVEKPPQKTLRVPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQANVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKARLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDEEDDEALGELEVDHGNPVEEDQDFPPLEINSRVLVQT
RDGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCNFASLEHTRLVPIC
DVMPEYSMQDQRLQKHSFAPRGSDKTSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSVD
PPAPPKSKSTWYIDEVGEDPAKSLTDTPPDSNQASPPSRAPPPASLSSDNKFHSLPFSLN
RKAGPIDSMSHGPLSLSVQSVMGEQPEPPSPVAPPSPHPATPLSRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKSDVEFYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILENVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLAIFECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHGKLSV
PKELQDGAGRQGGFPRQRMELFAVLCIETSHYVAFVKYGSADSSWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMSPEELHTLDPKSIQGQARRLLCDAYMCMYQSSTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggccctgtggagccaggagaagcccagtggcggctaccgggaggactggcgc
ttctacatggtcgtcaaggagtgcgcggtggagaagcctccccagaagaccctgagggtc
ccccggggcagcctcggccaggcctgccaggagcgcaacagcctggggagaacgctgccc
ccgtgcaagggcaagaagagcctccgcatcctggaccaggccaacgtggtgctgagcctg
gacgagcgggacgtcctggagctggacgagaagctggccgagctgctgttccccatcacc
aactgcgaggagcgctacgccctcctgtgcaacaaggcccggctggagcgcgtccgcgac
atcgactgcggctccaaggtgcgcgtccagctgcgctcgggggacgagcctctgcccggc
gtggtgcgcttcaagggctcgctgctccccgaccgagccctctccgggatctggtttggg
gtggagctgctggaggagggccggggccagggcttcacggagggctcctaccagggccgc
cagctcttccgctgcgaggacgagtgcggcgtgttcgtggccctggacaagctggagctc
tgggaggacgaggaggacgacgaggccctgggcgagctggaggtggaccacggcaacccg
gtggaggaggaccaggacttccccccgctggagatcaactccagggtcctggtgcagacc
agggacgggccggagagaggcaccatcatcttctgcgacctgctgccgggcaacgagagc
ctgggctactacgtgggcgtcgacatggacaaccctatcggggactgggatggcgtgttt
gacgggaagttgctgtgtaattttgccagtctggagcacacccgcctcgtccccatctgt
gacgtgatgccagaatattccatgcaggaccagcggctgcagaaacacagttttgccccc
agaggcagcgacaagacgtcgtccggccagagcaagcccaagagcaaaggattaggtcat
cagtgtggcagtagaagcaagtctgagttttactatactttaaatggcagctctgttgac
ccccccgccccgcccaaatccaaaagcacatggtacattgatgaagttggagaggacccc
gccaagtcgctcaccgacacgccccccgactccaaccaggcctcgccgccctccagagcc
ccgccccccgcctcgctgtccagcgacaacaagttccactcgctgcccttcagcctgaac
aggaaggcggggcccatcgacagcatgagccacgggcccctctcgctctccgtgcagtcg
gtgatgggcgagcagcccgagcccccgtcgcccgtcgcccccccatcgccgcatccggcg
acgcccctttcccgaggccagccgggcctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgcggcgtcatccgctgggtgggccttcctcccggcctgctggagcct
ctggcggggctggagctggaggaagagtgccccggctgcaccgacgggacctttaaaggg
acgcggtacttcacctgcccccccaagaaggcgctgttcgtgaagctcaagtgctgccgg
cccgactcccgcttcccctcgctgcaccactcctccaaccccatcgagcgctgcaactcc
atcgctttcggagggtacctgagcgaggtggtgcacgagaacacgcccccccgcacggag
aacgacggcctggacgtcatggtgggaaagaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgcctgttctccttcagctcggttctggacacggtt
ctgctgaggccgcgctcgaagagcgacgtggagttctaccgagagactcaggagctgctc
cgcaccgagatcgtcaacccgctgcgcatacacggctacgtctgtgctaccaaggtgatg
aagctgaggaggatcctggagaacgtagaagctgcttctgggttcacatccgaagaaaaa
gatcctgaggagttcctgaacatcctcttccatcacatcctgagggtggacccgctgctg
aagctcaggtcggcgggccagaaggtccaggactgctacttctaccagatcttcatggac
aagaaggacaaggtgggcgtccccaccatccagcagctgctggagtggtccttcatcaac
agcgacctcaagtttgcagaggctccctcctgccttatcatccagatgccgcgctttgga
aaagacttcaagatgttcaacaagattttcccctcgttggagttggacatcaccgacctg
ctcgaagacactccgagggaatgtcgtatctgcggcggcttggcgatcttcgagtgtcgc
gactgttacgaagacggcgacatcacggcgggcaagatcaaacagttctgtgagaagtgc
aatacgcaggttcacctccacccgaggaggaaagcccaccggcacggcaagctgtccgtc
cccaaggagctgcaagacggcgccgggcgccagggcggcttcccccgccagaggatggag
ctgttcgccgtgctgtgcatcgagaccagccactacgtcgccttcgtcaagtacggcagc
gccgactcctcctggctcttcttcgacagcatggccgaccgcgacgggggtcagaacggc
ttcaacatcccgcaggtgtccccgtgtcccgaggtggaggcgtacctgaagatgagcccc
gaggagctgcacaccctggaccccaagagcatccagggccaggcccgccggctgctgtgt
gacgcctacatgtgcatgtaccagagctccaccatgagcctgtacaagtag
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