Pseudoliparis swirei (Mariana hadal snailfish): 130193434
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Entry
130193434 CDS
T09868
Symbol
mcf2l2
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193434 (mcf2l2)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130193434 (mcf2l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_9
PH_10
SH3_2
Spectrin
hSH3
RPC3_helical
DUF6103
Motif
Other DBs
NCBI-GeneID:
130193434
NCBI-ProteinID:
XP_056269831
LinkDB
All DBs
Position
5:15035051..15136293
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AA seq
1270 aa
AA seq
DB search
MDAPGRLRGQSPLSRCPRCGKHRPAYSTVRISTAEMESFYHFLGVCQKTESNEIMQQEIR
PLLAVDIIEQLHRQFALLSGGRGKEGAPIIIFPEFSGFSEVPEEDFLNVVTYLTSIPSLD
AASIGFIIIIDRRKDKWSSVKASLSRIAGAFPGNLQLVLVMRPSRFFQRAMADIGIRLHK
DDFKMKVPIVMLNSLSDLHGYVDKGQLTRELGGNLEYCHSQWIHHRTAIENFAMTVKTTA
QMLQKFGTDLAETELPNDVQCTKDLLTAHTDKHSNLKDELKLALKQGTTLFGCIKEQAAK
SESHRLNPDEIENQTTVERLLAQLDETENAFEQFWCKHHLKLEQCLQLRHFEQDFREVKV
SLDSLMDILTSLSDIGDCVARVEHLINGLKTLEEKALPTLEKAQLHALHGDQLIQSDHYA
VDSIRPKCVELRRLCDDFSNESKKKTDVLSKSLQIHMGIDKVNQWCESGIYLLASQAVDK
CQSQEGAESALTDIEHFLESAEKNQLTELRNLHNQYEVVLSEDIRANVLKALKRLEDVQE
MFQKRHVSLKRLSAKQTRPVQPVAPRPESSPKRPALKTPPRTPGSQQPLARRVSDNSNSS
RQPVEGDPSKKRIIRKAKGGIKIEVMHEESQGGSTHVIVTNETEESLSNRRRHIMTELIE
TERLYVEELQSIMEGYFAELDNSELSHLIPPSLDNKRDVLFGNLPEIYEFHNRTFLRELE
NCAEKPELVGTCFLKRKEELQVYEKYCQNKPRSEVLWRQCGDSLFFQECQKKLDHKLSLD
AYLLKPVQRITKYQLIVKEMLKCSKGEGTAELEEALSTMLDIIKSVNDSMHQIAITGFEG
NLSELGKLLMQGSFNVWTDHKKGHSKVKDLARFKPMQRHLFLYDKMMLFCKKREEATDGH
DKTPSYSFKHSLKMSSVGITENVKGDIKKFEVWYNGREEVYIIQAPSMDVKNLWVSEIRK
VLTGQLEACREASQLNIYGAPMRNVRKMALRQSDSSSPESGFRRANPSPNMRQNRVDASA
SAANARKRFTLQGLSNRRSLQAEPAAKEAVVTRRFSLASSLTSSLTSSSSSFATRCTKGP
LSASIKSKRHEIKSDPTPLGYEDTLRGAMTAVRKRQSMTSSTAAAAAGGPPAVSRSTSQP
GWAQRRLPSMDTDDFETILSSAEESSNSSEEEGNNKNGDSGRFRVQLTYESRDGRDLSLE
AGDHVQFVEEAESGHWLVKNLLTEETGLVPSSILQTASEGDIFSDLCTAALSDSDDNEAS
TWGDVSQDSR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccaggcagactgcgaggccagagccccctgtctcgctgtccacgctgtggt
aaacatagaccagcctattccaccgtacgaatctccacggcggagatggagtctttctac
cacttcctgggggtgtgtcagaagacggagtcaaatgagatcatgcagcaggagatcagg
cccctgctggctgtggacatcatagagcagctccatcgccagtttgccttgctctcagga
gggcgagggaaagaaggcgcccccatcatcatcttcccagagttctcaggcttcagtgaa
gtgcctgaggaagacttcctcaatgttgttacttacttgaccagcatacccagcttggat
gctgccagtatcggcttcatcatcatcatcgaccggcggaaggacaaatggagctcagtg
aaggcctctctctcccggattgctggggcgtttccaggaaacctgcagctggtgttggtg
atgcggccgtcaaggttcttccagagggctatggcagacattggcatcaggctgcacaaa
gatgactttaaaatgaaggtaccgattgtgatgctcaactccctgtcggacctgcacggc
tacgtggataaaggccagctgacccgggagctgggtgggaacctggagtactgtcacagc
cagtggatacaccaccgaactgccatagagaactttgccatgacagtaaaaaccacagcc
cagatgttacagaagttcgggacagacctggctgaaacggagctgcccaatgatgtccag
tgcaccaaagacctgctcacagcacacaccgacaaacacagcaacctcaaggatgaacta
aagctagctctgaagcagggtaccaccttgtttggttgtatcaaggagcaggccgcaaag
tcggagagccacagacttaacccggacgagatcgagaaccaaaccacggtagagaggctc
ctagcccagctggatgagacggagaacgcctttgaacagttctggtgtaaacaccatctg
aaactggagcagtgcctgcagctacgccactttgaacaggacttcagagaggtcaaagtg
tcgttggacagtttgatggacattctcaccagcctatcagatatcggggattgtgtggcc
agagttgaacacctgataaacggactgaaaacactggaggagaaggctctgcccacacta
gaaaaggcccagctccacgcactgcacggtgaccagctgatccagagcgaccactacgct
gtggactccatccgacccaaatgtgtggagctccggcggctctgtgacgacttcagcaac
gagtccaagaaaaagacagatgtcttgtccaaatccctgcagattcacatgggcattgac
aaggtaaaccagtggtgtgagtctggcatctacctgctggcctcccaggctgtggataag
tgtcagtcacaggaaggggcggagtctgcactgactgacatcgaacacttcctggagtct
gcagaaaagaaccagctgactgaactgaggaacctccacaaccagtatgaggttgtcctg
tctgaggatatcagggccaatgtcctgaaggcacttaagcgcctggaggacgtccaggag
atgtttcagaagcggcacgtcagtctgaagaggctgtcagctaaacagacgaggcccgtc
cagccagttgccccccggcccgagtcctctccgaaacggcccgcactaaagacccccccc
agaactccagggagccagcagcctctggcccgcagagtgtcagataactccaacagcagc
aggcagccagtcgaaggggatcccagcaagaagaggatcatacgcaaggccaaaggaggc
atcaagattgaggtgatgcatgaggaaagccaaggaggctccacccatgtcattgtgacc
aatgagacagaggagagtctgtccaacagacgcagacacatcatgactgagctgattgaa
accgagaggttgtatgtggaggaactccaaagtatcatggagggttattttgcagagctg
gataattcagagctcagccacctcatccctccgtcgctggataacaaaagggatgtgctg
ttcggcaacctgccagagatatatgagttccataacaggacatttctcagggagctggaa
aactgtgccgagaaaccagagctggtgggaacctgctttctgaaaaggaaagaagagctg
caggtgtacgagaagtactgtcagaacaaaccccgctctgaagtcctctggagacagtgt
ggagacagcctgttctttcaggaatgccagaagaaactggaccacaaactgtccctggat
gcctacctgctgaagccggtccagaggatcaccaaataccaactcatagtcaaggaaatg
ttgaagtgcagtaagggagaggggacggctgagttggaggaggctttatccaccatgctg
gacatcatcaagtctgtcaacgactccatgcaccagatagccatcactggctttgagggg
aacctgagtgaactgggaaaactgctgatgcagggatcctttaatgtgtggactgaccac
aagaaaggccacagcaaggtgaaggacttggccaggttcaagcccatgcagaggcacctg
ttcctgtacgacaagatgatgctgttctgtaagaaacgagaggaggccacagatggacac
gacaagaccccgtcctacagcttcaaacattcactcaagatgagctctgtggggatcacg
gagaacgtcaaaggcgacatcaagaagtttgaggtgtggtacaatggcagagaggaggtt
tatatcatccaggctccttccatggatgtgaaaaatctgtgggtgtcagagattcgtaaa
gttcttacgggccagctagaggcgtgcagagaagccagccagctcaacatctacggggcc
cccatgaggaatgtgcgtaagatggcgctgagacagtccgattcatcaagtccagagtcg
ggcttcaggagagccaaccccagccccaatatgaggcagaacagagtcgatgcttcagcc
tcggctgctaacgctaggaaacgcttcaccttgcaggggctttccaacaggaggtctctt
caagcagagcctgctgctaaggaggcagtggtcacccgccgcttctctctcgcctcctct
ctcacctcctctctcacctcctcttcctcctccttcgccacacgatgcacaaaaggtccc
ctgtctgctagcataaagagcaagagacacgagataaagagtgatcccactcctcttggt
tatgaagatactttgcgtggtgctatgacagcagtcaggaaacgtcagagcatgactagc
agcaccgctgctgctgctgctggcggcccccccgctgtctctagatccacctcccaacca
ggctgggcccagagaaggctcccttccatggacacagacgactttgagacgatcctctcc
agtgcagaggagtcctccaactcttcagaagaggaaggcaacaataaaaatggtgacagc
ggtcggttccgggtacagttgacctacgagtctcgtgatggccgagacctctctctggag
gccggcgaccatgtccagtttgtggaggaagcggagagcggacactggctagtgaagaac
cttttaacagaggagacagggctggtcccgtccagtatactgcagacagcatctgaagga
gatatcttcagtgatctctgtacggcagcactctcggactcggacgacaacgaagccagt
acgtggggagatgtgtctcaggacagcagataa
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