Pseudoliparis swirei (Mariana hadal snailfish): 130193465
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Entry
130193465 CDS
T09868
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130193465 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pswi03051
]
130193465 (psmd1)
Proteasome [BR:
pswi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
130193465 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Nop52
CIS_TMP
Piezo_TM1-24
PA26
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
130193465
NCBI-ProteinID:
XP_056269906
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All DBs
Position
5:complement(18679380..18716730)
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AA seq
987 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALQKLDAIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIISKCIDHYTKLRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLDDHKYKQAIGIALETRRLDMFEKTILESSDVSGLLAY
SLKVCMSLMQNRKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLHTVGTPIPSVPGSTNTGTVPTPDKDSDAMET
DDKAGSSPAGKPVETKDEPKDQNAKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMVGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNFVRQGALIASALIMIQQSEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNMTISLQSRTGHTHMPSLVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVEVQEGEKEKEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE
KKKEAEPNFQLLENPARVMPAQLKVLNMPETCRYQPFKPLHTGGIIIMRDTSEEEEELVE
PVSAHGPKIEEEEQEPEAPEPFEYVDE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgataacatctgccgctggaattatttcactccttgatgaggaggagccacaactcaag
gagtttgctctgcagaagctagatgccattgtgaatgacttctgggctgagatttcagga
tctgtagataaaatcgaggtcctgtatgaggatgagacgtttcgtagccgagcatttgct
gccctggtggcctctaaggttttctaccacctcggagcctttgaggaatctctgaactat
gctctcggtgctggagatctcttcaatgtcacagatgattcagaatatgtggagaccatt
atttccaaatgcatcgaccactacaccaagctccgagtggagaatgcagagctgccagag
gacgaggagaagaaaagcattgacccccgacttgagggcattgtcaacaaaatgttcctg
cgttgtctagatgatcacaagtacaaacaggccattggcattgccctggagaccaggcga
cttgacatgtttgagaagaccatcttagaatcaagtgatgtgagtggccttcttgcctac
agcctgaaggtgtgcatgtccctcatgcagaacaggaagttccgcaacgaggtgctgcgg
gtgctggtcaagctctacatgaacttggagaagcctgatttcatcaatgtctgtcagtgc
ctgatattcctggatgacccacaggctgtgagtgacatcctagagaagctagtgaaagag
gacaacctgctgatggcctatcagatctgctttgacctgtatgagagtgccagccagcag
ttcctctcctccgtcatccagaacctgcacactgttggaacacctatcccttcagtccct
ggctctacaaatactggcactgtgcccacaccagacaaagacagtgacgcaatggagaca
gatgacaaggctggcagctcacctgctggaaagccagtagaaacgaaagatgagcccaag
gaccagaatgccaagatgatcaaaattcttagcggggagatggcgattgagctgcacttg
cagttcctaatccgaaataacaacacagatctaatgatcctcaaaaacacaaaggatgca
gttcgaaattcggtgtgtcacacagccacagtaatagccaactctttcatgcatacggga
accacaagtgaccagttcctcagagaaaacctggaatggcttgcaagagccaccaactgg
gcaaagttcacagcaacagcaagtctgggtgtcatccacaagggccatgagaaggaggct
ctccagttaatggccacctacttgcccaaagacacctcccctggctcggcttatcaggag
ggaggcggcttgtatgctctgggactcattcatgccaaccatggtggagacatcattgac
tacctgctcagtcagctcaagaatgccagcaatgatattgtccgtcatggtggtgcactt
ggtcttggcttggctgcgttgggaacagccagacaggatgtttatgaccttctcaagtcg
aatctgtaccaggatgatgctgttactggtgaagctgcaggcctggccctgggtctggtc
atggtgggctccaagtcggcccaggccatcgaggacatggtgggctatgctcaggaaacg
cagcacgagaagatcttgcgtggtctggctgtgggaattgctatggtcatgtacggacgc
atggaggaggctgataccctcattgaaagcctctgtagagacaaggaccccatcctgcgg
cgctctggtatgtacacagtgggcatggcctactgcggttccggtaacaacaaggccatc
cgacgcctgctacatgtcgctgtgagtgacgttaatgatgatgtcagaagagctgcggtc
gagtccattggcttcatcttgttcaggacccctgagcagtgtcccagtgtggtgtctctt
ctgtcagagagctacaacccacatgtgcgttgtggggctgccatggccttgggtatctgc
tgtgctgggacaggaaacaaagaggctatcaatctgcttgagccaatgactaatgaccca
gtcaattttgtgagacagggagccctcatcgcctctgccctcatcatgatccagcagtct
gaagtcacctgtcccaaggtgaaccagttcaggcagctctattcaaaggtgatcaacgac
aagcatgatgacgttatggccaagtttggagccatcttggcccagggaatcctcgatgca
ggtggacgtaatatgaccatctctctgcagtccaggacgggtcacactcacatgccgtca
ttggtcggcttgctggttttcacccagttctggttttggttccccctctcccacttcctg
tcattggcattcacaccaactgctataatcggactcaacaaggacctgaagatgcccaag
gtgcagtatcgttctaactgtaagccctccaccttcgcctacccgccagctctggaggtt
cccaaagagaaagagaaggagaaggtatccaccgctgttctctccatcactgccaaagcc
aagaagaaggagaaagagaaggaaaagaaagaaaaggaggaggagaagatggaggtggag
gtccaggagggggagaaggaaaaggaggagaaggagaaagagaaggagaaggaaaaagag
aaggaaaaagagaaggaaaaagagaaggaaaaagagaaggagaaagagaaggagaaagaa
aagaagaaagaggcagagccaaacttccagctcttggagaacccggccagggtgatgccg
gctcagctcaaagtcctcaacatgccggagacttgccgctaccagccctttaaaccgctc
cacacaggcggcatcatcattatgagagacaccagtgaggaggaggaggagctggtggag
cccgtctcggctcacggtcccaaaattgaggaggaagagcaggaaccggaggcaccggag
cccttcgagtacgttgacgagtag
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