Pseudoliparis swirei (Mariana hadal snailfish): 130193473
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Entry
130193473 CDS
T09868
Symbol
lmx1a
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130193473 (lmx1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
130193473 (lmx1a)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
CAF20
CDC45
IgD_del_linker
Motif
Other DBs
NCBI-GeneID:
130193473
NCBI-ProteinID:
XP_056269914
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Position
5:complement(21726412..21738823)
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AA seq
374 aa
AA seq
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MTFQPTLYFLSTDLAIIADMDQSAVCAGCHRNITDRFLLRVTGGLWHEECVRCAACGDAL
TSSCFLRDRKLYCKRDYYDLFAVCCGGCSEAVSPAELVLRAGAAVFHLRCFTCSVCSCRL
QTGDRCVLREGRLLCAREDYHQCVASPTSSDTGRSEEEEEEEEEEEESGRVTHRRVRSED
LDSKRPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK
MKKLARRQQQQQEQHQTQEQREHPSHHTAPSCGGLTSELEHLGSSFTHVQQHQQMGLTTL
EPQDYDMDPFRQGLTPPQMPGDHMHPYGFKGLYGDMDRDPLCHVADSDCLSLGDSSLLTP
IDRLYSMQDSYFTS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaccaacactttacttcctgagcacggatctggccatcattgcagatatg
gatcagagcgcagtgtgtgcgggatgccaccggaacatcacagacagattcctgctcaga
gtcactggcggcctctggcacgaggagtgtgtgcggtgcgcggcttgcggggacgcgctc
acgagctcctgctttctgcgggaccgcaaactttactgcaagcgggactactacgatctg
tttgcagtgtgttgtgggggctgctcggaggccgtctctcccgcggagctggtgctgcga
gcgggcgccgctgtgttccacctgcgctgcttcacctgcagcgtttgttcctgccgcctg
cagaccggagaccgctgtgtcctcagggagggacggctactgtgtgccagagaggactat
caccagtgtgtggccagcccgacctcctccgacacaggtagaagtgaggaggaggaagaa
gaagaagaggaggaggaggaatctggaagggttacacacagacgagttagatcagaagac
ctggacagcaaacgacccaaaaggccacgcaccattctgacaactcaacaaagacggacc
tttaaagcctcctttgaggtctcgtccaagccctgccgaaaggtaagggagaccttggca
gcagagactggtctgagcgtccgggttgtgcaggtctggttccagaaccaaagggccaaa
atgaagaagttggccaggagacagcagcagcagcaggagcagcatcaaacccaggagcag
cgagagcatccatcacaccacacagcgccctcctgtggcggtttgacatctgagctggag
cacctggggtcctcctttacccacgttcagcagcatcagcagatgggcctcaccacgctg
gagccgcaggactatgacatggaccccttcagacagggcctgacccctcctcagatgccg
ggggatcacatgcacccctacggttttaagggtctgtatggcgacatggacagagaccct
ctgtgtcatgtggctgacagcgactgcctgtccctgggtgactcctctctgctcaccccc
atcgaccgcctctactccatgcaggactcttacttcacctcctga
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