Pseudoliparis swirei (Mariana hadal snailfish): 130193494
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Entry
130193494 CDS
T09868
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130193494 (gabra5)
04082 Neuroactive ligand signaling
130193494 (gabra5)
04519 Cadherin signaling
130193494 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130193494 (gabra5)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130193494 (gabra5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130193494
NCBI-ProteinID:
XP_056269937
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All DBs
Position
5:complement(27664931..27669829)
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AA seq
446 aa
AA seq
DB search
MRRLWLCVGLLSATCSLSASLAGSPKEAELNDNITIFTRILDGLLDGYDNRLRPGLGEKV
TEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLALNNLLASNIWTPD
TFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFG
SYAYPVSEVVYSWTQEAAKSVVVAEDGSRLNQYHLIGQTAGTEDIYTSRGQYTVMMAHFY
LKRKIGFFVIQTYMPCFMTVVLSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP
KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSYAWDGKKALEAQQPRKKDPNPPVL
SKKPNNSCSALTSSDLLKAVSTVSSSTAVLLRPPGAPKGPDPKKTYNSVSRIDKMSRIVF
PVLFGTFNLVYWATYLNREPVIQGAD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtctgtggctctgtgtcggcctcctgagcgccacctgcagcctgagcgcctct
ctggccggatctcccaaagaggcggagctcaacgacaacatcaccatcttcacccgcatc
ctggacggcctgctggacggctacgacaaccggctgcggcccggactgggagagaaggtg
acggagatcaaaaccaacatcttcgtcaccagcttcgggccggtgtccgacacggagatg
gaatacaccatcgacgtgttcttccgccagagctggaaggacgagcgcctgtgcttcaag
ggcccgatggagatgctggccctcaacaacctgctggccagcaacatctggacccccgac
accttcttcctcaacgggaagaagtccatcgcccacaacatgaccacgcccaacaagctg
ctgcggctgaaggacgacggcacgctgctctacaccatgagactcaccatctcagctgag
tgccccatgcagctggaggacttccccatggacgcccacgcttgtcccctgaagtttggg
agctacgcgtacccggtctccgaggtggtctactcgtggactcaggaggcagctaagtcg
gtggtggtggccgaggacgggtccagactgaaccagtaccacctgatcggccagacggcc
ggcacggaggacatctacaccagcagaggtcagtacacggtgatgatggctcacttctac
ctgaagaggaagatcgggttcttcgtcatccagacctacatgccgtgcttcatgaccgtc
gtgctgtcgcaggtctccttctggctcaaccgggagtcggtaccggccaggaccgtcttt
ggtgtgaccacggtgctcaccatgacgaccctcagcatcagtgccaggaactctctcccc
aaggtggcgtacgccacggcgatggactggttcatcgccgtgtgctacgccttcgtgttc
tccgccctcatcgagttcgccaccgtcaactacttcaccaagaggagctacgcctgggac
ggcaagaaggccctggaggcccagcagcccaggaagaaggaccctaaccctccggttctg
tccaagaagcccaacaactcgtgctcggcgttgacctccagcgacctcctgaaggccgtg
tccaccgtctccagcagcacggccgtcctgctgcggcccccaggggcccccaagggcccg
gaccccaagaagacctacaacagcgtcagcaggatcgacaagatgtcccgcatcgtgttc
ccggtgctgttcgggaccttcaacctggtctactgggccacgtacctcaaccgggagccg
gtgatccaaggagccgactaa
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