Pseudoliparis swirei (Mariana hadal snailfish): 130193539
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Entry
130193539 CDS
T09868
Symbol
map1sa
Name
(RefSeq) microtubule-associated protein 1B
KO
K10429
microtubule-associated protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130193539 (map1sa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130193539 (map1sa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130193539 (map1sa)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130193539 (map1sa)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
130193539 (map1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
130193539
NCBI-ProteinID:
XP_056270031
LinkDB
All DBs
Position
5:28319116..28326630
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AA seq
1246 aa
AA seq
DB search
MAASAVAEQGGGPGGPSGPGSYRTAAADYSVLVVVGSLRPAGLLERLLRQIDSGVRCWPV
HLDVSLLDQQLKLFVSRHLAFLSEDVPGQRTLQHRGDVLDTQVVVNPTHGFVCSQVRRLV
CDPSPHKLLVLAGQCLEESGEIVFQRGCFSLRDLLLILEEDEVVELLRSPASGTKARLTL
SCPDVGVWKTSVLEDQLQDYIQLQINPPAVLPQMEGLQEFTEYLSESLEAESPFELLEPP
STVGFLKLSRPCCYIFPGGRGDSAFFAVNGFNVLVNGGSDSRSCFWKLVRHLDRIDSVLL
THIGVDNLPGLNSLLLRKVAEQEEESAGSQTEEDWMKNLISPEIGVVFLNAPHRLKSSRG
DPGELRSCDQVALTLQNLQKLSIKPEPLSRSNGPRIEPVILFQKMGVGRLELYPLNPVTG
SKNLDALMQIWPNNVSDVKGSDLPLPCLVSICALLVWHPSSPQERIIRVLFPGCTPQTKI
LDGLEKLKHLDFLKHPVVCLEDRETSRSEKQPKRAESRESLKSQSKDFRPSSALQKDKLA
RVDVKKQEARTLPTPAERTHKEKKDGEEKPKLKDPDVKSNPPKLTEKLVPKKDVSKEEKK
EVKKKNEKVTGRWRREKEAIKKETLSMKAKKDVKPEPKKDGPKDGKSARPAVREVKKAAS
GASSTEGKKTCGKSGSLKKEGTLPKKDTFGTKGKPGTREQENQKVADRSKVFTPEEMMAD
FERLRLEDNNGNDSKDLNSDGAKTNGNQTSTVESPEKFGCMETAQLSNKNSASHLAGHTA
SHRKEDRLSLRDVSGARGSSLGFEDSRTSDLENSPSSQDKQSGLLMLSPLKGMEPDSSTS
MPAEVGSPHSTEVDESLSVSLEQALPATDPLGDGVYSNGHIRSSDCITRMALPPGSNRNG
LSGSVDHIHGMSGLVSDVPHDVDLCLVSPCEFQHPKTPDNHQQHFHPGLAIDSPDLSDNN
NHSQDQSSSDGPSADSQETPPASDSVPTATDSDVPPCAEECPFITAEMDSDDDSGSLFPP
SHPEDPPSPHYCHRVGSDPPPAPVKDLPPLPPQPGACMADAEAGKNLKSSAAKTKKPTGQ
AQKATAGSTPGQTGKSPMASLKMTSSIDTKPSSRKSLGGSRIGPGKVCSSAGSAVYVDLA
YLPSGCASSTVDLDLFRRLRSSYYIISGDGPLKEAAMRSILDALLEGKSSWPEVQVTLIP
TFDSLAMHEWYQETHARQEELCITVLGSNSTVAMQEETFPACKVEF
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcagcagtagcggagcagggcggtggtcccggtggtcccagtggtcccggt
tcttaccggactgcggcggcggactactcggtgctcgtggtggtggggtcgctgcggccc
gccggactgctggagcggctgctgcggcagattgattcgggtgtgcgctgctggcctgta
catctggacgtctctcttctggaccagcagctgaagctcttcgtgtcgagacacctggcc
ttcctgtcggaggacgtcccaggacagaggacgctgcagcaccgcggagacgtcctggac
actcaggtggtcgtgaacccgactcacggcttcgtctgctcacaggtgcggcggctcgtc
tgtgatccatctccacacaaacttctggttctggccggtcagtgtttggaagagtccgga
gagatcgtgttccagagaggctgcttctccctccgagacctcctcctcatcttagaagaa
gatgaggtggttgagttgttgcgctcgccggcctcggggacgaaggcccgcctgaccctc
agctgtccagacgtgggtgtttggaagacgtctgtgttggaggaccagctgcaggactac
atccagctccagatcaacccccccgccgtcctcccgcagatggagggtctgcaggagttc
acggagtacctgtccgagtctctggaggccgagtcccccttcgagctcctggagcccccg
agcaccgtgggcttcctgaagctgtctcggccgtgctgctacatcttccccggagggagg
ggggactctgccttctttgccgttaacggttttaacgtcctggtgaacggcggctcagat
tcccgctcctgtttctggaaacttgttcggcacctggatagaatcgactcggtgctcctg
actcacatcggcgtggacaacctccccgggctgaacagtctgctgctgaggaaagtggcg
gagcaggaagaggagtcggctggatctcagactgaggaggactggatgaaaaacctcatc
tcccctgagatcggggtggtcttcctcaatgctccccaccggttgaagtcctcccgggga
gatcccggcgagctgcggagttgtgaccaggtggcgctcactctgcagaatttacaaaaa
ctttccatcaaacctgaacctctcagtcggtctaacggacccaggatagaaccagtaatc
ttgtttcagaagatgggagtgggccgtctggagctgtacccactgaaccccgtcactggc
agcaaaaaccttgacgctttaatgcagatttggccaaataacgtatccgatgttaagggt
tcagatcttcctctaccgtgccttgtttccatctgtgctttgctggtctggcatccttca
agtcctcaggagagaatcatccgtgtcctttttcccggctgcacgccgcagaccaagatc
ctggacggacttgaaaaactcaaacatttggatttcctcaaacatccggtcgtgtgtttg
gaggaccgagaaacatccagatccgagaaacaaccaaaacgagcagagagtcgggaaagc
ctgaagtcccagtcgaaggacttccgtccaagcagtgccttgcagaaagacaagctcgca
cgagtggatgtcaaaaaacaggaggcgagaacgctgccgacccccgcggaaagaacgcat
aaagaaaagaaagatggggaagaaaagcccaaactaaaggatccagatgtcaaatcaaat
ccaccgaaactgactgagaagttggttccaaagaaagatgtgtcaaaagaggagaaaaaa
gaagtgaaaaagaagaatgagaaggtcactggaagatggaggagagaaaaagaagctata
aaaaaagaaactttaagtatgaaagcaaagaaagacgtcaaaccggaaccaaagaaagac
ggaccgaaggatgggaaaagcgccagaccagctgtgagagaagtaaagaaagcagcaagt
ggagcttcaagtacagaaggaaagaaaacttgtggaaagagtgggagtctgaaaaaagaa
gggactcttccaaagaaagacactttcgggaccaaaggtaaaccaggtacaagggagcag
gaaaaccagaaggtggcagatcgctccaaggtgttcacacctgaggagatgatggcggac
tttgaaagacttcgattggaggacaacaatgggaacgactccaaggacctgaattctgat
ggagcaaagaccaatgggaaccagacctcgacggtagagagtccagagaagtttggttgt
atggagacggcccagctctccaataagaactctgcctctcatttagcaggacataccgct
tcccatcggaaagaggaccgtctgagtttaagagacgtctccggggcgagaggatccagt
ctgggctttgaggacagcaggacctccgacctggaaaactctccatcctctcaggataag
cagtcgggtcttttgatgcttagtcctttgaaaggcatggagccagactcctccacctcc
atgccggcggaggtgggctctcctcactccacagaagttgatgaatccttgtcggtttct
ttagagcaggctctgccagccactgaccccttgggagacggagtctactctaatggacat
attagaagctcggactgcatcacgaggatggccttacctccgggatcgaaccgtaacggc
ctcagtggatcagtggatcacatccacgggatgtcaggcctcgtctcagatgttccacat
gatgtagacctctgcttagtgtcgccttgtgagttccaacaccccaagactccagacaac
catcagcagcatttccaccccggcctcgccatcgactcccccgacctctctgacaacaac
aaccactcccaggatcaaagcagcagtgacggcccttcagccgacagccaggaaactcca
ccggccagcgactccgtccccacagccacggactctgacgtccccccttgtgcagaggaa
tgtccattcatcaccgcagagatggactcggatgatgattccggtagccttttcccaccc
agtcatccagaagatcctcccagtccccactactgccacagggtggggtctgacccccca
cctgccccagtcaaggatttgcccccgttgccgccccagcctggagcctgcatggccgac
gcagaggccggcaagaacttgaagagttcagctgccaagaccaagaaaccaactggtcaa
gcgcagaaggccaccgcaggaagcaccccaggccagaccggcaagtccccgatggcgtcc
ctgaagatgacgtccagcatcgacacaaagccatcctccagaaagtcacttggaggctcc
agaattggtcctggcaaagtgtgttcctcagctggttccgcggtctacgtggacctggcc
tacctgccgtctggctgcgcctcttcgaccgtggacctggacctgttcagacgcctccgc
tcctcgtattacatcatcagcggagacggcccgctgaaggaggcggcgatgaggagcatc
ctggacgccctgctggaggggaagagcagctggccggaggtccaggtgactctgatccca
acgttcgattcgctggcgatgcacgagtggtaccaggagacccacgcccggcaggaggag
ctgtgcatcaccgtgctgggcagcaacagcaccgtcgccatgcaggaggagacctttccc
gcctgcaaggtggagttctga
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