Pseudoliparis swirei (Mariana hadal snailfish): 130193557
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Entry
130193557 CDS
T09868
Symbol
palld
Name
(RefSeq) palladin isoform X1
KO
K22029
palladin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130193557 (palld)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130193557 (palld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
130193557
NCBI-ProteinID:
XP_056270054
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All DBs
Position
5:26694321..26740583
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AA seq
1426 aa
AA seq
DB search
MQDGSWNLPLPVSPLLKGPAGGGAPEGDRGVFSEASSDGELYLDSVTELDYGGDGDFADL
TAFLSAEEIHRSLDLALEAFGDTLDSEDPRPPCSPTSQEQAPRPPTENLCTGPILQHQTK
APLPVPFAGEVSFSQNAPLHKPAPRKPPQPVYKQDKPRLVHEGLELNDRSASATEFCSRA
ATFIEELSSIFKASSAHSEQQAEQDSSSPDSGYLTPRGQRPAPQGSAAAADPVPAPSREA
EMPAASPEPPAALRSEHPGAPTAHGPLTPPCFLQKLKSQEVAEGSAIRLECTVVGNPLPL
VRWFCEGRELHNSPDIQIWRDGDLHTLVIPEAFEDDTGRYTCVASNSIGADNTSAEVYIE
GASSSDSEGEGDESESRSGAMPQVQKKITSLSLTIRSPSPKTSEGLPHRSTLVQALSRPP
QRIHGPVSSTYVGEVSGPPVFTKLLQDAQASEGQVVVLECRVRGSPPLQVRWYRHGEEIL
DSPDFRVLQKKPRSAAEPGVGCSSPPEEICTLVIAEAFPEDGGRFCCAASNPHGSVSSAA
RLSVAAAEDCSNVSGDSSSAFEDVAAFPPPPPPPTEISLLELPPKTPPQPGAFLAGELEI
WPGALAPEAEGEGTDYGHAPNLASLSLCKVTPPPPLPPPQSHPDATAQSPARVATDCPPS
PGKDGPPLPTRPKPKLAQRVEEETGSQRNATQLKLLQDQILLEQQEAANWQQQKLQEQEV
PPPPQRPAQEVPPPAPPSPPLPPPPSFQELESSAAAMQASTFNYARPKQFIAAQGPGRAG
YATQSSGSSGSSPSPLSPATSHKPFGLVGTPPLAKAGSVESPTSPSFPPPPPPFFSSTNL
PSPSGPAQDFPPPPPPPLPVSPVFSDASSPFSSVPPSPASSFLTSVLPSTPSSPSSPTVN
ALGLPRGNGTVKAFPRKTSVTRAPRAASDSDIQGTKDAVIQDLERKLRFKEERMSNGQQK
LTYEEKMARRLLGAATAATVLNTQDAEEEPVTQEDKSSDREPFPQKEYKVSSFEQRLISE
IEFRLERYPVEESDDDVQHDDDDGAAGAAPTFEQKLKHYKVFEGMPVTFTCKVHGDPKPK
VYWFKDGKQISKRSDHYRISRHADGSCCLHTASSSLDDDGNYTVMAGNPQGRVSCTGRMM
VQAVNQRGRTPRSAPGHMRRPRSRSRDSGDENDNIQERHFRPHFLQAPGDLIVQEGRLCR
MDCKVSGLPTPDLIWQLNGQTIRPDSAHKMLVRENGVHSLVVEPVTSRDAGVYTCIASNR
AGQNSFNLELIVAAKEMHKAPSFVEKLQNTGVAEGHPVRMECRVTGIPSPQIFWKKENES
FTHNTDRISMHQDNCGYLCMIIQPAMKEDAGWYTVSAKNEAGIVSSTARLDVHAQWQQPN
LPRPKKVRPSTSRYAALTERGLDVKAAFFPDCSPLPAGGLVESDDL
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggagctggaatctgccgctccccgtctcccccttgctcaagggcccggca
ggaggcggggccccagagggcgacaggggggtgttctccgaggcgtcctccgacggggag
ctctatctggactcggtgacggagctggattacggaggagacggggacttcgcagatctc
accgccttcctgagtgcggaagagatacaccgcagcctggacctggccctggaggccttt
ggcgacacgttggactctgaagacccccggcccccctgtagtcccacatcccaggagcag
gctccccgacctccgactgaaaacctctgcacgggcccaatcttgcagcaccagaccaaa
gccccactacctgtgccctttgcaggtgaagtctctttcagccagaacgcccccctacac
aagccggccccccgcaaacccccgcagcccgtttacaagcaggacaaaccccggctggtc
cacgaaggcctggagctgaacgaccggtccgcttccgccacggagttctgcagccgagcc
gccaccttcatcgaggagctgtcttccatcttcaaggcttcttctgctcattcggagcag
caggcggagcaggactcctcctctcccgacagcggctatctgactcccaggggtcagcga
ccggccccccagggctcggctgccgccgccgacccggttccggctcccagccgggaggct
gagatgccggccgcgagcccggagcctccggccgccctgcggtctgagcaccccggagct
ccgaccgcccatggaccgctgactcctccctgcttcctccagaagctgaagagccaggag
gtggcggaggggagcgccatccgtctggagtgcacagtcgtgggaaacccgctgccgctc
gtcaggtggttctgtgagggccgcgagctccacaactcccccgacatccagatctggagg
gacggcgacctccacacgctggtgatccccgaagccttcgaggacgacacgggacgctac
acctgcgtggcgtccaacagcatcggagcggacaacacctccgccgaggtctacatcgaa
ggagcttcgtcgtcggactcagagggagaaggagacgagtccgagtccagatcaggagcc
atgcctcaggtgcagaaaaagatcacatcattgtccctgacgatacgctcgccatcaccc
aagacctccgagggcctccctcatcgctccaccctggtccaggccctgtctcggcctccc
cagcggatccatggcccagtgtcgtcaacgtatgtgggcgaggtgtccggtcctcctgtc
ttcaccaagctgctgcaggacgcccaggcctccgagggccaggtggtggttctggagtgc
cgggtccgaggaagccctcctctgcaggtcagatggtaccgccatggagaggagatcctg
gactcccccgattttcgggttctccagaaaaagcctcggtctgcagccgagccaggtgtt
ggctgttcttctcctccagaggagatctgcacgctggtgatcgccgaggccttcccggag
gacgggggccggttctgctgcgcggcgtccaaccctcacggctccgtcagcagcgcggcg
aggctctccgtcgctgcagccgaggactgcagcaacgtgtctggtgacagcagctcggcg
tttgaggatgtggccgccttcccccctcctcctcccccgcccacggagatcagcctcctg
gagctgccgcccaagacgccgcctcagcccggcgcgttcctcgccggggagctggagatc
tggcccggtgcgctggccccggaggcggagggcgaggggacagattacgggcacgcccca
aatctagcatcactaagcctgtgtaaagtaaccccaccaccacccctacctccaccacag
tctcaccctgatgccacagctcaaagtccggcccgagtggcaacagactgccctccgtcc
ccggggaaggatggccctccgctgcccaccaggcccaaacccaagctagctcagagagta
gaggaggagacggggagtcaaaggaacgcgacccagctgaagctgctgcaggaccagatt
ctactggagcaacaggaagccgccaactggcagcagcagaaactgcaggaacaggaagtc
ccgcctccgccccagcgaccggctcaggaagtgcctcctcctgctccgccatctcctcct
ctcccgcctcctccctccttccaggagttggagagcagcgccgctgccatgcaggccagc
accttcaactacgcccggcccaagcagttcatcgccgcccagggccccggcagggcgggc
tacgccacccagtcctccggctcctcggggtccagcccctcgccgctgtcgcccgccacc
tcgcacaagcccttcggcctggtgggcacgccccccctcgccaaggccggcagcgtggag
tccccgacctccccgtccttcccgcctcctcctccgcccttcttcagctccactaacctg
ccctccccgtcggggcccgcccaagacttccctcctcctcctcctccgcccctccccgtg
tctccggtcttctccgatgcgtcctcgccgttctcctccgtccccccgtctccggcctcc
agcttcctgacctcggtgttgccctccacgccgtcctcgcccagcagccccacggtcaac
gccctgggcctccccaggggcaacgggactgtcaaggcgttccccaggaagacctccgtc
accagggcgccgcgcgccgcctccgactccgacatccagggcaccaaggacgccgtgatc
caggacctggagaggaagctgcgcttcaaggaggagcgcatgagtaatggccaacagaag
ctaacctatgaggagaagatggctcgccggctgctgggagccgccaccgccgccacagtc
ctaaacactcaggacgcggaggaggagcctgtcacgcaggaagacaagtcatctgacaga
gaacctttccctcaaaaggagtacaaggtgtccagcttcgagcagcggctcatcagtgag
atcgagttccgcctggagcgctacccggtggaggagtcggacgacgacgtgcagcacgac
gacgacgacggcgccgccggcgccgcgccgacgttcgagcaaaagctcaaacactacaag
gtgttcgagggcatgccggtcaccttcacctgcaaggtccacggagaccccaaacccaag
gtgtactggttcaaagacgggaagcagatctctaagcgcagcgatcactaccggatcagc
cggcacgccgacggcagctgctgcctccacacggccagcagctcgctggacgacgacggc
aactacaccgtcatggccggcaacccacagggcagggtgagctgcaccggcaggatgatg
gtccaggccgtgaaccagcggggccggaccccgcgctccgcccccggacacatgcgccgg
ccgcggtccaggtccagagacagcggggacgagaacgacaacatccaggaacgccacttc
cgcccacacttcctgcaggcgcccggcgacctcatcgtccaggaggggcgcctgtgccgg
atggactgcaaggtgagcggccttcccacgccggacctcatctggcagctgaacggccag
accatccgccccgactccgcccacaagatgctggtgcgtgagaacggcgtgcactcgctg
gtcgtggagcccgtgacgagccgcgacgccggcgtctacacgtgcatcgccagcaaccgg
gccggccagaactccttcaacctggagctcatcgtcgccgccaaagagatgcacaaggcg
ccgtcgttcgtggagaagctgcagaacacgggcgtggccgagggtcacccggtgaggatg
gagtgccgcgtcaccggcattccttcaccgcagatcttctggaagaaggagaacgagtcg
ttcacgcacaacacggacaggatcagcatgcaccaggacaactgcggctacctgtgtatg
atcatccagccggccatgaaagaagacgccggctggtacaccgtgtcggccaagaacgag
gccggcatcgtgtcgagcacggcgcgcctcgacgtccacgcccagtggcagcagccaaac
ctccccaggcccaagaaggtgcgcccgtccaccagccgctacgccgcgctcacggagcga
gggctggacgtgaaggccgccttcttccccgactgcagcccgctgccggccggaggcctg
gtggagagcgacgacctgtag
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