Pseudoliparis swirei (Mariana hadal snailfish): 130193563
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Entry
130193563 CDS
T09868
Symbol
sgip1a
Name
(RefSeq) SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1
KO
K20065
SH3-containing GRB2-like protein 3-interacting protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193563 (sgip1a)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
130193563 (sgip1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
Adap_comp_sub
Ndc1_Nup
ATG29_N
Motif
Other DBs
NCBI-GeneID:
130193563
NCBI-ProteinID:
XP_056270065
LinkDB
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Position
5:complement(3229640..3273166)
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AA seq
883 aa
AA seq
DB search
MMEGLKKRTRKAFGIRKKEKDNDSTGSPDRDSGEPQEVESSQKKSNGAPNGFYEDIDWDR
YNSPEVDDEGYSIRPEDESEEGAPTVKKPHFFSSDESEGEEDHRKKFKIKIKPLPSDRVA
AAPSVDELKASVGNIALSPSPMRRSPALKRNPSSEEIARPRRVAVAPPPPTAAPTAAPQL
PSSQPPPVSEDTTDLFGPPLETGFGEPKSEGGPSESDPWGAALLSEPQASRTRAFPTGTP
PPLPPKNVPTGPPSTAPPSADVAEVSSIADLDNIFGPEEPAPPAGEETSDAWVCFSAESP
EEPAPPFPGSPPRPEAAAPTVPPSPPSPQEPAPPLPVSPPPEEEPAPPLPTSPTSSEEPA
ALSAPSSPPPTPEARHLAASPKELESPPPSSPPTPLDSASSLPPAPAPKASAPPAAACSV
LLVPSPEERPKNSDVLQSKDGGSETAASPGDATQGSRSTHPPPPPPTYRTVVSSPGPTSG
PGGSNSGASSPVRPATPPSVGPTPPPPPPRPPSRPKLPPGKPSVGDAMVPFSPPVHSASP
PPVAPLARAESTSSISSTNSMSAATTPTVNKELSVSVSENDQPSLVWFDRGKFYLTFEGC
SRGPSPLTMGAQDTLPVAAAFTETVNAFFKGANPNKCVVKVIGEMVLSFPAGITRHFANN
PSPAVLTFSITNYSRLEHVLPNPQLLCCAATAAAADTKDFWVNMPNLISHLKKVAEQKPQ
ATYYNVDMLKYQVSTEGLQSIPLNLAVSWRCEPTSTDLRIDYKYNGDAMATPTALNNVQF
LVPVDGGVSKLQAVLPPAAWNAEQQRILWKIPDISQKSENGGVGSLLARFQLTEGPSKPA
ALAVQFTSEGSTLSGCGIELAGPGYRFSLVKKRFAAGKYLADN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggattgaaaaaacgtaccaggaaggccttcgggatacggaagaaagagaag
gacaatgactccacggggtccccagacagagacagcggcgaaccccaagaggttgaatcg
tctcagaagaagagcaacggggcccccaatggcttctacgaagatatcgactgggacaga
tataactctcccgaggtggacgacgaaggctacagcatcagacctgaagacgagtcagaa
gagggagcgcccaccgtcaaaaagccccacttcttttcctccgacgagtcggaaggagag
gaggaccacaggaaaaagttcaagatcaagatcaagccgctgccgtccgaccgcgtggcg
gccgcgccctcggtggacgagctgaaggcctccgtcggcaacatcgccctgtccccgtct
ccgatgagacggagcccggctctgaaaaggaacccatccagtgaggagatcgccagaccg
agacgcgtcgccgtggccccgcccccgcccacagcggcccccacagcggcgccgcagctc
cccagcagtcaaccaccgccggtctctgaggacaccacagacttatttgggcctccgttg
gaaacgggcttcggagaaccaaaaagtgaaggggggccctctgagtcggacccctggggg
gccgctctgctctcagagccccaagcctctcggacaagagccttccccacaggaactccg
cctcctcttccgcccaagaatgtcccgaccggccccccgtcgaccgcccccccctctgca
gacgtcgctgaagtttcctccatcgcggacctggacaacatctttggcccggaagagccg
gcgccccctgctggcgaggagacgagtgacgcgtgggtctgcttcagtgcagaatcgccc
gaggaaccggcgcctcccttcccgggctctcctcctcggcccgaagccgccgccccgacc
gtgcctccgtcgccaccttctccacaagagcccgccccgcctctccccgtgtcccctccc
ccagaagaagagccggcgcccccgctcccaacctcccccacttcctcggaggagcccgcc
gcactgtccgccccctcgtctcctcctccgaccccagaggctcggcatctcgccgcctct
ccaaaggagctcgagtctcctcccccttcttctcctcccactcctttagactccgcctcc
agcttgccaccagcccccgctccgaaagcaagcgcccctcccgccgcagcgtgctccgtc
cttctggttccgtctccggaggagcggcccaagaactctgacgtcctccaatccaaagac
ggcgggagcgaaaccgccgcctcgcccggcgacgccacccagggcagccggagtacgcac
cccccacctcctcccccgacgtatcggaccgtggtgtcgtcgccaggtcccacgtccgga
ccgggaggctcaaatagtggcgcctcctccccggtgcgacccgccactcctccgtcggtc
ggccccacccctccacctcctccaccccggcccccgtcacggcctaaacttccgccgggg
aaaccgtctgtcggagacgcaatggttccgttcagcccgccggtccactcggccagcccc
ccccccgtggccccgttggcgcgggccgagagcacctcctccatctcctccaccaactcc
atgagcgccgccaccaccccgaccgtcaataaagagctctccgtgtccgtgtcagagaat
gaccagccgtcccttgtctggtttgacagagggaagttttatttaacctttgaaggctgc
tcccgggggcccagtcctctcaccatgggggctcaggacactctccctgtggccgccgcg
ttcacagagacggtcaacgccttctttaaaggagccaaccccaacaagtgtgtggtgaag
gtcataggtgagatggttctgtcgtttccggcaggcatcacgcggcactttgccaataac
ccgtcgcccgccgtgctaaccttcagcataaccaactacagccggctggagcatgtgctg
cctaacccccagctgctctgctgcgccgccaccgccgccgcggccgacaccaaggacttc
tgggtgaacatgcccaacctcatctcccacctgaagaaggtggcggagcagaagcctcag
gccacgtactacaacgtggacatgctcaagtaccaggtgtcaacggaggggctccagtcg
attcccctgaacctggcggtgagctggcggtgcgagcccacgagcacggacctgaggatc
gactacaagtacaacggggacgccatggcgacgcccacggccctcaacaacgtccagttc
ctggtcccggtcgacgggggggtttcaaaactacaggcggtcttacctcccgccgcatgg
aatgcggagcagcagcggatcctctggaagattcctgacatctcacagaagtctgaaaac
ggaggtgtgggctcgctgttggcccgcttccagctcacggagggtcccagcaagccggcg
gcgctggcggtgcagttcaccagcgagggcagcacgctgtcgggctgcggcatcgagctg
gcggggcccgggtaccgcttctccctcgtcaagaagaggttcgccgcaggaaaatacctg
gctgacaactga
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