Pseudoliparis swirei (Mariana hadal snailfish): 130193587
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Entry
130193587 CDS
T09868
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130193587 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130193587 (snrpd1)
03032 DNA replication proteins [BR:
pswi03032
]
130193587 (snrpd1)
Spliceosome [BR:
pswi03041
]
Complex A
U1 snRNP components
Sm proteins
130193587 (snrpd1)
U2 snRNP components
130193587 (snrpd1)
Complex B
U1 snRNP components
130193587 (snrpd1)
U4/U6.U5 tri-snRNP components
130193587 (snrpd1)
Complex C
U2 snRNP components
130193587 (snrpd1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130193587 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
130193587
NCBI-ProteinID:
XP_056270115
LinkDB
All DBs
Position
1:9616157..9618944
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagtcaggttcttgatgaaactcagccatgagacggttaccatcgaactgaag
aatggaacccaggtccatggcaccatcaccggtgttgatgtgagcatgaacacccacctg
aaggcggtgaaaatgaccctgaaaaatcgggagcccactcagctggaatcgctgagtatt
cgtggcaacaacattcgctactttatcctccccgacagcctcccactggacaccttgctg
gttgacatcgagccaaaggtcaagtccaagaagagggaagcagtggctggacggggacga
ggcagaggacgaggccgtggcagaggaagaggacgaggtcggggtggcccgaggagataa
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