Pseudoliparis swirei (Mariana hadal snailfish): 130193593
Help
Entry
130193593 CDS
T09868
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 isoform X1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03010
Ribosome
pswi04120
Ubiquitin mediated proteolysis
pswi04137
Mitophagy - animal
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
130193593 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130193593 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130193593 (uba52)
04137 Mitophagy - animal
130193593 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pswi03011
]
130193593 (uba52)
04121 Ubiquitin system [BR:
pswi04121
]
130193593 (uba52)
Ribosome [BR:
pswi03011
]
Ribosomal proteins
Eukaryotes
Large subunit
130193593 (uba52)
Archaea
130193593 (uba52)
Ubiquitin system [BR:
pswi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130193593 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
130193593
NCBI-ProteinID:
XP_056270120
LinkDB
All DBs
Position
5:2634806..2636503
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgttgacggggaagaccatcaccctcgaggtcgaacccagc
gacactatcgagaatgtcaaggcaaagatccaggacaaggaagggattcctcccgatcag
cagcgtctgatcttcgctggcaaacagctcgaggatggacgcacgctgtccgactacaac
atccagaaagaatccactctgcacctggtcctgcgtctgcgtggcggcatcatcgagccg
tctctcaggcaactggcccagaagtacaactgtgacaagatgatctgccgcaagtgctac
gcccgtctgcacccgcgcgccgtcaactgccgcaagaagaagtgcggccacaccaacaac
ctgcgccccaagaagaagctgaagtag
DBGET
integrated database retrieval system
