Pseudoliparis swirei (Mariana hadal snailfish): 130193610
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Entry
130193610 CDS
T09868
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130193610 (farp2)
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Paralog
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
PH_13
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
PH_11
PH_20
DUF8236
Motif
Other DBs
NCBI-GeneID:
130193610
NCBI-ProteinID:
XP_056270151
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All DBs
Position
5:complement(12222245..12249978)
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AA seq
1063 aa
AA seq
DB search
MGELEGSYRVLQTPGIRLGAQFNPGISTLEPGQSLGGNMVSGSKSHGRWLQIRVQGLDDS
QEFFDVDPKAIGQYLLSEVFLRGNLIERDYFGLEFQNMQMNWVWLEPTKPIMRQVRRPAN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLIESRLICTENTGALLASHLVQSEIGD
YGDAADGDFLRTTKLLPYQEKVQERIMELHRRHLGQTPAESDFQILEIARKLEMYGVRFH
PAADREGSKINLAVAHMGLQVFQGNTKINTFNWSKIRKLSFKRKRFLIKLYPEVHGLHQD
TLEFLMASRDQCKIFWKICVEYHSFFRMFDQPQPKSKAILFTRGSSFRYSGRTQKQLVDY
VRENGAKRTPYQRRNSKIRMSARSLATDVPKQSLSFNDSLGAPGFPSPATVSFHPAHISS
LLPLAELQPQPRPLATPSRSPAPPQQQLQSPLQAARPPSPPKEDPVKAASPSHYAFQDAM
DSPQFSPMISKDPLCLSPSFQMSTLSLPGQTPSPLQSPILSEVGSNARLEEEEEEGRRKR
YPTDKAYFIAKEILTTERTYLKDLEVITVWFRSAVIKENAMPEALMTLLFSNIDPIYEFH
RGFLKELDQRLAFWEGRSNAHVKGDYQRIGDVMLRNMCALKEFTGFLRKHDEVLTELEKA
SKKLKKLETVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYSPGHRDHDDCK
EALKEVAEIATQLQSSLIRLENFQKLTELQRDLIGIENLTGPGREFIREGCLYKLTKKGL
QQRMFFLFSDMLLYTSKGVTATNQFKVHGQLSLHGMILIVLDTPVEESENEWSVPHCFTI
YSAQRTVVVAASSKVEMGKWIEDMNMAIELAKKSQEKSTIFLDAEVGDHSNRSSDEVSLE
QESEDDMNSSLTSLDKQTHHRANTTMHVCWHRNTSVSMSDHSQAVENQLSGYLLRKFKNS
NGWQKLWVVFTNFCLFFYKTHQDDFPLASLPLLGYTVSTPEESDGIHKEYVFKLQFKSHV
YFFRAESEYTFERWMEVIKSAASTTGRMSLLIPKGAPVEMNGN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggggagctcgagggttcataccgggtcctgcagacccctggcatacggctgggagcc
cagttcaaccctggtatcagcactttggagccgggccagagcctcggcggcaacatggtc
agcgggagcaagagccacgggcgatggctacaaattcgcgtccagggactggacgactcc
caagagttctttgacgtcgaccccaaagctattggacagtatctcctctctgaggttttc
ttgagaggcaacctcatagagcgggattactttggtctggagtttcagaacatgcagatg
aactgggtttggctggaacccacgaaacccattatgagacaagtcaggagaccggccaat
acgcttttcagactgtcggttaaattctttcctccagaccctggtcagctgcaggaggag
tacacaaggtacttattctctctgcaaatgaaaagagatctgattgagtccaggctgatc
tgtacagaaaatactggagccctgctggcctctcacctcgtccagtcggagatcggcgac
tacggcgacgcagcagacggggacttcctgaggaccaccaaactgttgccgtaccaagag
aaggtgcaggagaggatcatggagctccaccgcaggcacctgggccagactccagctgaa
tcagattttcaaatcctggagattgcccgcaaactggagatgtatggcgtccgcttccac
ccagcggccgaccgggaaggctccaaaatcaacctggccgtcgctcacatgggccttcag
gtttttcagggcaacaccaagataaacaccttcaattggtccaagattcgcaaactgagc
ttcaagagaaagaggttcctgatcaaactctacccagaggttcacggtctccatcaggac
acattggagttcctgatggccagtcgggaccaatgtaaaatcttctggaagatctgcgtg
gaataccactcgtttttccgcatgtttgaccaaccccagcccaaatccaaagccatcctc
ttcaccagaggctcttccttcagatacagtggaaggactcagaagcaactcgtggactac
gtcagggaaaacggggcgaagagaactccataccagaggaggaacagtaaaatacgaatg
tctgctcgctccctcgccacagatgtgccaaaacagagcttgtcattcaacgacagtctc
ggggccccaggcttcccttctcctgccaccgtgtccttccacccggcgcacatctccagc
ctcctcccactagcagagctccaacctcagccacggcctttggccacaccgagccggtct
ccagcgcctccccagcagcagcttcagtcccctctgcaggctgccagacccccaagccct
ccgaaggaagaccctgtcaaggccgcgtccccatctcactacgcttttcaagatgccatg
gacagcccccagttctcccccatgatctccaaggatcccctctgcctgtccccctccttt
cagatgtcgaccctcagcctgccgggccagaccccgtcgcccctgcagagccccattctg
agcgaggtgggcagcaatgccaggctagaggaagaggaggaggagggcaggaggaagcga
tatcccaccgacaaggcctacttcatcgccaaagagattctgaccacggagcgaacgtat
ttgaaagaccttgaggtcatcactgtgtggttccgcagcgccgtgatcaaagaaaacgcc
atgcccgaagccctgatgaccctcctcttctccaacatcgaccccatctacgagttccac
cggggcttcctcaaggagctggaccagaggctggctttctgggagggtcgctccaacgct
cacgtcaagggcgactaccagaggatcggcgacgtgatgctgaggaacatgtgcgccctg
aaggagttcaccggcttcctgcggaaacacgacgaggtgttgacggagctggagaaagcc
agcaagaagctgaagaagctggagacggtctataaggagttcgagctgcagaaggtctgc
tacctgcccctcaacacgttcctgctcaagcccatccagcgcctcatgcactacaagctc
atcctggagcgactgtgcaagcattactctcccggccaccgcgatcacgatgactgcaag
gaggctctgaaggaagtggctgagatcgccacccagctccaaagcagcctcatccggttg
gagaacttccagaagctgaccgagctgcagagagacctgatcggcattgagaacctgacg
gggccaggcagggagtttataagagagggctgtctgtacaagctcaccaagaaaggactg
cagcaaaggatgtttttcctgttctcagacatgctcctctacacgagcaaaggcgtcaca
gcgaccaatcagttcaaagtgcacggccagctgtcccttcatggcatgatcctcatagtg
ctggatacaccggtcgaggagagtgaaaacgagtggtcggtcccacactgcttcaccatc
tactctgctcagaggaccgttgtcgtggctgccagttctaaagtggagatggggaagtgg
attgaggacatgaacatggctattgaactggccaagaagtcccaagagaagtccaccatc
ttcctcgatgcagaagtcggcgaccactccaaccgatcatccgacgaggtctccctggag
caggagtcggaagacgacatgaactcgtcgctcacgtcgctggacaagcagacgcaccac
cgggccaacaccaccatgcacgtgtgctggcaccgcaacaccagcgtgtctatgtctgat
cacagccaggctgtggagaaccagctgtcgggttacctgctgaggaagttcaagaacagc
aacggctggcagaaactctgggtggtcttcaccaacttctgcttgttcttctacaagact
caccaggacgacttcccgctggccagcctgcccctgctcggctacacggtcagcacccct
gaggagtcggacggcatccacaaggagtacgtcttcaagctgcagttcaagtcccacgtt
tacttcttccgggcggagagcgagtacaccttcgaaagatggatggaggtgatcaagagc
gcggccagcaccacgggccggatgagcctgcttatacccaaaggggctcctgtggagatg
aacgggaactga
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integrated database retrieval system
