Pseudoliparis swirei (Mariana hadal snailfish): 130193613
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Entry
130193613 CDS
T09868
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130193613 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130193613 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
130193613
NCBI-ProteinID:
XP_056270163
LinkDB
All DBs
Position
5:24559608..24616035
Genome browser
AA seq
1619 aa
AA seq
DB search
MPTLPSALAMDGENYLHPEGPQQDSSLFSVASSNMESSIYASSDSWESYSQPAGYSIHCP
MQSGNQQYHLNSSTTATTPDAHMDMYSGFPDVDFSSLNLPRNGDFPQDLSCIDDLSTNSL
FSSPADSLSEYTDAQPFISPDNLNTVPTLWDVNTSTTTTTSTTTPAQSQLELNGTSRFHG
LASLDDITAIISTPPLGGFQPQRTQTPTEEEEDAEEEETEELGHVDTYAEYRPSKSTIGI
SHPDIVVETNTLSSVPPPDITYTLSIPEPTVKCGLLSALQLEAIIYACQQHEVILQNNQR
AGFLIGDGAGVGKGRTVAGIILENYLKGRKKALWFSISNDLKFDAERDLKDIDALTIPVH
ALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRIKQILDWCKPDFDGVIVFDECHK
AKNATSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRVFEDF
LHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRVEEIRLDSDFKLVYNKAAILWA
EALQVFMRAANELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELARKDLLAGKCIV
IGLQSTGESRTREVLDENDGQLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGIKRKRKP
RGRQHKVPKHTVDSGGVINISDDSSSDSDGMDTDSNSSPDSLLDNDDVIFVNHTSCQAAR
IEEMKQGLLNKISVLGKELPLNTLDELIDKFGGPDKVSEMTGRKGRVVRRPDGSVCYETR
AEQGLTIDHINIKEKDRFMGAEKFVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWS
ADRAIQQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESR
DLSKYNFENKYGTKALDKITKAILGQIENKVPPPKGYPVGEALFFRDMKIGMMDVGIFCR
ESRFGINTEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDL
APGNDEIYEEKQETFMTVGNPQDGQVVLYKISVDRGMPWAEAYNKSLKLSSPDEGFYLSL
KLRGSHPCVLLAEQGRGKNLIVYKPNIGKQTHPESLDNLQLRYRKVTSEEAKDSWENQFT
FSFKKCSHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKCVSDVVSELTSSSIL
QIVRLKTKHHNKQVGIKIPENCVARVREELLQMDDEVKRRRKEREQQAAEQQLAEERARK
MEQENKHLLANLFNQKPMLNQSLAQSQALKQKLSQNQRTQAAGAMTQLQRLQAQSQAALQ
QNSPLLSSQRNPSRSQQRTNNSWANNRGGGGGGGGGGGGGGRRSNFSQFYPQPFATPFPP
LKSPSLPPPAATATAAAASKDPLDEILDLTVSSPSPDSTEAAAAGGGGLSLDGMAAHSAA
AFAEDFNLESLMAQTAPNNAQHAAALQPFLLQQNLNLLASSRHQDLMDLLDLPLSTQMPA
QKASPSSSTSSCSSSSASSAPHAPAGLLPPSGLLPPSGLLPPSGLLPPSSPSLFSGPPSS
SSSLFSNSSPRFSSNYLLPLSDSLTLPNGHAGALDVREALNSMLQGPDRSSVIQYRPQD
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcccctcagcgctggccatggacggggagaactacctgcatccagaaggc
cctcagcaggacagcagcttgttctctgtggcctcctctaacatggagagttcaatatat
gcctcctctgattcctgggaatcctactctcagccggctggatacagcatacactgccct
atgcaatctggaaaccagcaataccacttgaacagcagcaccaccgccaccactccggat
gcgcacatggacatgtactcgggattccccgacgtggacttctccagcctcaacctccct
aggaatggagatttcccccaggacctgtcctgcattgatgacctctccaccaactctctg
ttctcctcgccggccgactcgctgtcggagtacaccgacgcgcagcccttcatcagcccg
gacaacctgaacacggtgcccaccctctgggacgtcaacactagcaccaccaccaccacc
tccaccaccacaccagcacagagccagctagagctgaatggcaccagcaggtttcatggc
ttggccagtttggatgatataactgctattatcagcaccccacctttaggaggattccag
cctcagagaacccagacgcccaccgaggaggaagaggatgccgaagaagaggagacagag
gaactgggacatgtagacacatacgccgagtacagaccttccaaatccacgataggaatc
tctcatcctgacatcgtggtggagaccaacacgctctccagtgtccctcctcctgacatc
acctacacgctgtccatccccgagcccactgtcaaatgtggcctgctgtccgctctgcag
ctggaggccatcatctacgcctgccagcaacacgaggtcatcctccagaacaaccagagg
gccggcttcctgatcggagacggggccggggtcgggaagggacgcacggtggccggaatc
atcctggagaactacctgaaggggaggaagaaagcactatggttcagcatatccaatgac
ctgaaatttgatgcagagagagatctcaaagacatcgatgcactgactatccccgtgcac
gccttaaacaagattaagtatggagacaccgctacctcagaaggagtcctgttcgccacg
tactccgcgctgattggagagagccaggcgggggggcagcaccggacgagaatcaaacag
atcctggactggtgcaagccggacttcgacggagtcattgttttcgacgaatgccacaaa
gctaagaatgccacttccacaaagatgggcaaggccgtgctggacctgcagaacaagctg
ccgcgggccagagtggtgtacgccagcgccaccggtgcctctgagccaaagaacatgatc
tacatgagccgcctgggaatctggggcgagggcacgcccttccgggtctttgaagacttc
ctgcacgccatcgagaagagaggcgtcggcgccatggagatcgtcgccatggacatgaag
gtgagcggcatgtacatcgcccggcagctgagcttctcgggggtgtcgttccgcgtcgag
gagatcagactggacagcgacttcaaactggtctacaacaaagctgccatactgtgggcg
gaggcgttgcaggtgttcatgcgtgcggccaacgagctgggcctggtgagcaggaagtcc
ctgtgggggcagttctggtcgtcccaccagcgcttcttcaaatacctctgcatcgccgcc
aaggtccgctgcctggtggagctcgcccggaaagatctgctggccggaaagtgcatcgtc
atcggcctgcagtcgaccggagagtcccggaccagagaagtcctggatgagaacgacggg
cagctcgacagattcgtctccgcagcggagggggtattccagtctctcgtaacgaagcat
ttcccttcggagaaacagaggagagagaaagctccggggattaagagaaaacggaagcct
cgaggtcgccagcacaaggtgccgaagcacaccgtggacagcggcggcgtgatcaacatc
agcgacgacagcagcagcgactcggacggcatggacacggactccaactcctcgccggac
tccctgctcgacaacgacgacgtcatctttgtcaaccacaccagctgccaggcggccagg
atagaggagatgaagcagggcctcctcaacaagatctccgtgctggggaaagaactacct
ctcaatacgctggacgagctcatcgataagttcggaggaccagataaagtctccgagatg
accgggcgtaagggtcgcgtggtccggcgtcccgacggcagcgtgtgttacgagacccgg
gccgagcagggtctcaccatcgaccacatcaacatcaaggagaaagaccgcttcatgggc
gcagagaagttcgtggccatcatctcggaggcggccagctccgggatttccctgcaggcg
gacaagcgagtgaagaaccagcggcgccgggtccacatgaccttggagctgccttggagt
gcagacagggccatccagcagttcggtcgcacccatcggtccaatcaggtgacggccccg
gagtacatcttcctcatctcagagttggctggggagagacgcttcgcctccattgtggct
aaaagactagagagtctgggagcgttgacccacggagaccgaagagccacggagtccaga
gacctgagcaagtacaactttgagaacaagtacggcaccaaggctctggataagatcacc
aaagcgatcctcggccagatagagaacaaggtgcccccacccaaaggataccccgtggga
gaagccctgttcttcagagacatgaagattgggatgatggacgtgggaatcttctgcagg
gagtcgcgctttgggattaacacggagaaagactgcagcatcaccaagttcttaaaccgc
atcctgggcctggaggtccacaagcagaactacctgttccagtacttcacggacaacttc
gactacctgatcgagaaggacaagaaggagggcaaatacgacatgggcatcctagatctc
gccccgggtaacgatgagatctacgaggagaagcaggaaaccttcatgacagttggaaat
cctcaggatggacaggttgttctctataagatcagcgtggaccgaggcatgccgtgggcg
gaggcctacaacaagtccctgaagctcagcagccccgatgagggattctacctgtccctg
aagctgcgaggaagccacccgtgcgtgctgctggcggagcaaggacgaggcaagaacctc
atcgtgtacaagcccaacatcggcaagcagacgcacccggagagcctggacaacctgcag
ctgcgctaccgaaaggtgacttccgaggaagccaaggacagctgggagaaccagttcacc
ttctccttcaagaagtgcagccacgccaactggaatgggaagtgtaagaaaatcgaggaa
ggtcaggagtgtctgcagggcatgcggctgcgtcagtaccacatgctgtgcggcgcgctg
ctgcgcgtgtggaagtgcgtgtccgacgtggtgtccgagctcaccagctccagcatcctg
cagatcgtccgcctgaaaaccaaacaccacaacaagcaagtcggtatcaagatccccgag
aactgcgtggcgcgcgtgcgcgaggagctcctgcagatggacgacgaggtgaagcggcgg
cggaaggagcgcgagcagcaggcggcggagcagcagctggcggaggagcgagcgcgcaag
atggagcaggagaacaaacacctgctggccaacctgttcaaccagaagccgatgctcaac
cagtcgctcgcccagagccaggccctcaagcagaagctgagccagaaccagaggacgcag
gcggcgggcgccatgacgcagctgcagcggctgcaggcccagagccaggcggccctgcag
cagaactcgcccctgctgtcctcgcagagaaaccccagtcgatcgcagcaacggacgaac
aacagctgggccaacaaccggggcggcggcggcggcggcggcggcggcggcggcggcggc
ggccgccgctccaacttctcccagttctacccgcagcccttcgcgaccccgttcccgccg
ctgaagagcccgtcgttgccgccgcccgccgccaccgccaccgccgccgccgcctccaag
gaccccctggacgagatcctggacctgaccgtgagctcgccgtcgcccgacagcacggag
gcggcggcggcgggcgggggggggctgagtctggacggcatggcggcgcactcggcggcg
gcgttcgccgaggacttcaacctggagtctctgatggctcagacggcgcccaacaacgcc
cagcacgccgccgcgctgcagccgttcctcctgcagcagaacctcaacctgctggccagc
agccgccaccaagacttgatggacctcctggacctgcccctgtccacccagatgcccgcg
cagaaagccagcccgtcgtcctctacctcctcctgctcgtcctcctccgcgtcctcggcg
ccgcacgcccccgccggcctcctgccgccgtctggcctcctgccgccgtctggcctcctg
ccgccgtccggcctcctgccgccgtcctcgccctccctcttctccggcccgccgtcctcg
tcctcctcgctgttctccaactcctccccccgcttctcctccaactatctcctccccctg
tcggactcgctgacgttgcccaacggccacgccggcgccctggacgtgcgcgaggccctg
aacagcatgctgcagggaccggaccgctcgtccgtcatccagtaccggccgcaggactaa
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