Pseudoliparis swirei (Mariana hadal snailfish): 130193643
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Entry
130193643 CDS
T09868
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130193643 (lrrc8c)
Ion channels [BR:
pswi04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
130193643 (lrrc8c)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_5
TEX29
LRR_9
Motif
Other DBs
NCBI-GeneID:
130193643
NCBI-ProteinID:
XP_056270227
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Position
5:6667130..6677704
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AA seq
795 aa
AA seq
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MIPVMEFRQFSEQQPGFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVMQDKIICLPLRVS
SLPVNKSEVESKSLLHLQSNISAPTREMTGRKTDLDLQQYSFINQMCYEKALHWYAKYFP
YLVLIHTLIFMVCSNFWFKFPGSSSKIEHFISMLSKCFDSPWTTRALSEVSGENTEEKED
KKSATLRSTIALSPGEGSLEKTQSLRSIPEKIVVEKPSASALDKREGEQAKALFEKVKKF
RLHVEEGDILYLMYVRQTVFKVFKFLLIVAYNSSLVNKVRNTVLCEVEIQDMTGYKDFKC
NHTMAHLFSKLSYCYLCLVAVYGLTSLYTSYWLFYRSLKEYSFEYVRQETGISDIPDVKN
DFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTAEKLRQRLQTNGSNRLEL
QLFMLPGLPDPVFEVAELQSLKLEIINNVTIPASISQLQDLQELSLYQCSLKLHTTATSF
LKENLKVLRVKFDDNRELPHWMYGLRNLEELHLTGSLCPDVSKNIVLESLREMKCLKTLS
LKSNLTKIPQSIVDVSSHLQRLYFHNDGSKLVMLNNLKKMTNLIELELVRCDLERIPHAI
FSLTNLQELDLKENNLRSIEEIISFQHLRKLICLKLWYNGITYIPEHIKKLGSLERLYFS
HNKIEVLPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLLYFSVTCNKIESLPDELFFC
KKLKTLKLGKNSLSILSPKISYLALLTNLDLKCNHFEILPQELGCCRALKRSGLIVEETL
FETLPSDVRDQMKAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtcatggaattccggcagttctctgaacagcagccagggttcagagtcctg
aagccgtggtgggacgtgttcaccgactacctgtctgtcgtcatgctcatgattggcgtc
tttggatgcactcttcaggtaatgcaagataaaatcatatgccttcctctgagagtctcg
tcgctcccggtgaacaaaagtgaagtggaatccaagtcactgttacacctgcaatccaat
atttcagccccaacgagagaaatgacaggtcggaaaaccgatctggatctccaacagtac
agtttcatcaaccagatgtgttacgagaaggctctgcactggtatgccaagtacttccct
tatttggttctcatacacactctgattttcatggtgtgcagcaacttttggttcaaattc
cccggctcaagctctaaaatagagcatttcatctccatgctcagcaagtgcttcgactct
ccctggaccacacgagctttgtcggaggtgtccggagaaaatacggaggaaaaggaagat
aaaaagagcgccacattgaggtccaccatcgctttgtctcctggggaaggaagtctggag
aagacgcagtccctccggtccatcccggagaagatcgtggtggaaaagccgtcggcgagt
gccctcgacaaaagagagggcgaacaagccaaagctctttttgaaaaggtgaagaagttc
cgtttgcacgttgaggaaggagacatcctctatcttatgtacgttcggcagacagtgttc
aaggtgttcaaattcctcctgatcgtcgcttataatagctccctcgtgaataaagtgcgg
aacacggtgctttgtgaagtggagatccaggacatgacgggatacaaagactttaaatgt
aaccacacaatggcccatctgttctccaagctttcctactgctacctgtgtttggtggcc
gtctacggcttgacaagcctgtacacctcttactggctgttttaccgctcgctcaaagag
tactcctttgagtatgtgcgacaggaaaccggcatcagcgacatcccagacgtcaagaac
gactttgctttcatgctgcacatgattgaccagtacgacccgctgtattcgaagcggttt
gccgtctttctctccgaggtcagcgagaacaaactgaagcagctcaacctcaaccacgag
tggacggcggagaagttgcgtcagaggctgcagacgaacggcagcaacagacttgaactt
cagctcttcatgctcccggggttacccgaccccgtcttcgaggtggcggagctgcagtcc
ctcaagctggagatcatcaacaatgtcaccatcccggcctccatctcgcagctgcaagac
ctgcaggagctgtctctttaccagtgctctttaaagttgcacacaacggctacctcgttc
ctcaaggagaacctgaaggtgcttcgggtgaaattcgatgacaacagggaacttccccac
tggatgtacggcctgcgcaacctcgaggagctccatctcactgggtctctatgccccgat
gtctccaaaaacatcgttctcgagtcactgcgggagatgaagtgtttgaaaactctctcc
ctgaagagtaatttgacaaaaataccccagtccatcgtggatgtctccagccatctgcag
cggctgtacttccacaacgatggctctaaactcgtcatgcttaacaacctgaagaagatg
accaacctgatcgagctggagctggtacgttgcgacctggaacgcatcccgcacgcgatc
ttcagcctgaccaatctgcaagagcttgacctcaaagagaacaaccttcgctcaatagag
gagatcatcagcttccaacatcttcgaaaactaatttgcctcaaactttggtacaacggc
atcacgtatatcccggagcacatcaagaagctcggcagcctcgagcgcctctacttcagc
cacaacaagatcgaggtcttgccttcgcacctgttcttgtgcaacaagcttcgctacctg
gacctgtccaacaacgacatccggttcatccctccagagattggagtccttcagagtcta
ctgtatttctctgtcacctgtaacaaaattgaaagtctgccagatgagctgttcttttgc
aaaaagctcaaaacgctaaagctcggcaagaactcactgtccatactctcgccaaagatt
tcctacttggctctactgacaaacttggacctcaaatgcaaccactttgagattctgcca
caagagctcggttgctgtcgcgctctgaagcgcagtggtctcatcgtggaagagacactg
tttgaaactctgccttctgacgtcagagaccaaatgaaggctgagtga
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