Pseudoliparis swirei (Mariana hadal snailfish): 130193656
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Entry
130193656 CDS
T09868
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00260
Glycine, serine and threonine metabolism
pswi00270
Cysteine and methionine metabolism
pswi00450
Selenocompound metabolism
pswi00670
One carbon pool by folate
pswi01100
Metabolic pathways
pswi01230
Biosynthesis of amino acids
Module
pswi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130193656 (cth)
00270 Cysteine and methionine metabolism
130193656 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130193656 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130193656 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130193656 (cth)
Enzymes [BR:
pswi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
130193656 (cth)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130193656 (cth)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
TrkA_N
Motif
Other DBs
NCBI-GeneID:
130193656
NCBI-ProteinID:
XP_056270256
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All DBs
Position
5:19140934..19148692
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AA seq
442 aa
AA seq
DB search
MDKSQKQEEQNDLYAGFIPAYKSFATDAIHIGQEPEQWKSMAVVPPISLSTTFKQLEPGN
HAGYEYSRSGNPSRNCLEKAVAALDGAKYCIAVASGLAATVTITHLLKMGDGIVCMDDVY
GGTNRYFQNIATENGLEVSFADCTKPELLKAALKANTKLVWIETPSNPMMKVVDIKACSQ
VAHEYNKDIVVVVDNTFMSAYFQRPLALGADVCMYSATKYMNGHSDVVMGLASMNRDDLY
ERLKFLQNALGCVPSPFDCFLCNRGLKTLHLRMERHFKNGMAAAKFLEAHPNVERVIFPG
LPSHPQHEVMKRQCTGCPGMITIYIKGKLEHAKVFLSNLKVFAIAESLGGYESLAEHPVI
MTHASVPEKERIVLGISDTLIRLSVGLEDEEDIIEDLRQALAAAVSNIQHWWSIKPMWFL
LIFKRLNYAAKFMGVWNYCRLS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggataagagtcaaaagcaggaggagcagaacgatttgtacgccggcttcatcccggcg
tacaaatcgttcgccacagacgcaattcacatcggtcaggaaccagagcaatggaaatca
atggctgtcgtgccgccgatttctctgtctaccacgttcaagcagctcgagccaggaaac
catgctggatatgaatacagccgaagtggaaacccttcaagaaactgtcttgagaaggct
gtggctgctttggatggggcaaagtattgcattgctgttgcctcggggttggcagccaca
gttaccatcactcacttgctcaagatgggtgatggaatcgtctgcatggatgacgtgtac
ggaggcacaaaccgctacttccaaaatattgcaactgaaaatggcctggaggtgtctttt
gctgactgtacaaaaccagagctgctgaaggctgctctgaaagccaacactaaactggtg
tggattgagacaccctccaaccccatgatgaaggttgtggacatcaaggcctgttctcag
gtggcccatgaatacaacaaggacatcgtggtggttgtggacaataccttcatgtcggcc
tacttccagcgccccttggccttgggagccgatgtctgcatgtattcagcaaccaaatac
atgaatggtcacagtgacgtggtgatgggtctggcctcaatgaaccgggatgatctgtat
gaacgactgaagtttctgcaaaatgctttgggctgtgttccgtctccctttgactgcttc
ctgtgtaaccgaggactgaagaccctacacctgcggatggagcgccatttcaagaatggc
atggctgctgcaaagtttctggaggcacatcccaatgtggagcgggtcattttcccaggc
ctgccctctcaccctcagcatgaagtgatgaagagacaatgcaccggatgtccggggatg
atcaccatctacattaagggcaaactcgagcacgccaaagtcttcctcagtaacctcaaa
gtatttgcgatcgctgagagtcttggtggttatgaaagtttagcagaacatccggtgatc
atgacccatgcatcagtgccagaaaaagagaggattgtcctggggatcagtgacacactc
atccgactgtctgtgggtctggaggatgaggaagacataattgaagacctgagacaagca
ctggctgctgctgtaagtaacatccaacactggtggtccatcaaaccaatgtggtttctg
ttaatattcaaacgtttaaattatgccgccaagtttatgggagtgtggaattattgtagg
ctctcttaa
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