Pseudoliparis swirei (Mariana hadal snailfish): 130193671
Help
Entry
130193671 CDS
T09868
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130193671 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130193671 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130193671 (nup153)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130193671 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
130193671
NCBI-ProteinID:
XP_056270288
LinkDB
All DBs
Position
1:9461526..9477359
Genome browser
AA seq
1482 aa
AA seq
DB search
MTAIRRRNTERHSDERAMAATGGGKIRSRRYHIASKPYAKNKQQQSGLISRVTDTVKSIV
PSWLQKYFKSEDAPEEGGSALGTDQNCQPPTPPNGSEEGPLPLDGCDSPEPSTSYTEPST
SRASLNFQGDVLSRPPLSRSHHHFPPLETSSPTLGTSSGLFSQPSTSSAPGPFSTGFSLV
KEIKDNFSQHEDDNISTTSGFSSRASEKDVPTSKTASLPQLWSPEMERTQSGPQPAQSSL
RKPSFNLSVFGTSSNSSLNSTVLNSSQLGDSPFYPGKTMYGGAAAVRTSRARPGTPYQAP
LRRQIKAKPACAQPCGVTSATARRILQSLERMSSPLADARRIPAAASSPLSASIDGTNLD
VSQAKRKRMDSSLPPVQKLMVPVAALVSGNRSVSFRPTLTPGGVSRTLDRAPRETPTRKS
PQLPEVTPGPSRSTMISSGPAYPLSSTPAASSVSSGGGKMKRERTSTRPSSKRPEEDEVA
EVLDLPIISLPISSAALPTFSFSSSLPPVATNSTAPNITHVTPAKEIVSNKEPPTASTPP
SVPFTFSSPIVKATAASPPSFSPSAGFTFSAPAKLGPSMSNGKLAYPIEAAVKFATSKIT
EDFEGPFKPAKALKQGSVLDLLKAPGFASPVAQPSPGPASDLLQTSTLSTTPSSITTTTS
SPSSTRFGDVFKAPPGWGCDVCLVQNKPSDTKCVCCMAPQPSSSKSMDSKPSTATSAGRE
SSGTYTTSTTTTTAGIMFFKPGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKPSLTLPS
AFSAVKTVSPPTAPVSTGFVGFGDKFKKPAGAWECDTCMIENKAEDTKCVACTSSKPGAS
AGASSTSNAQVFGLGNAFKMPEGGWDCDACLLQNKAADVQCVACQAVKPGAKVEPKAFGS
SAAVTSGSNSGVSNFGTSDSTSGDESVGFKFGGSLTESSSSSSSGGFKFGGTFGSSSTET
FSKDTTASSGFKFGSSSEGFKFGTSSRDDKKSDQSAAAPGFKFGTSAGIVFGTGSSNTES
NSSKGGFTFGLSKPEEKTADTTTNPSSCSFTPPAPSQEKSEVAASSNDTTSTTTAGSVFG
SLAATTPQGGSTFGTLQKDKAPAAPTFTFGKPEEKKEAAASSATSAFLFGAASKDTDAAA
PAAAVSGGFSFSKPSALTEQPPPAYNFGKPAEKSETAEAPKPSFSFGQSAADSSTAPKQA
FSFMVGNATNTVNSTTSSSTIPTPSLFGISSSTQAPAPSAAPSTFMFGQTAATSNDAPPA
KAFVFGQSQDSQPSALSAAPLNSTPTPVPAQPFIFGAPASAAAAPPAAAAPSFGFGAAAP
TAASTTAPSAAPSPFAFSPAPSSGFGANQTSSFGSSFGSLFPAPPAQPPAFGAKPNATPV
FGQQTNATPVFGAAANSTQGGGFQFGGASAFGATNNTSGGVFTFGPPANPSVAPQAGPTG
GGFNFTKPPPFNIGSTKSVTTPPAGQPAIAGRKIKTAVRRRK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgagaggcactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcatatcgcctctaaaccttacgccaag
aataaacagcaacagtcaggcctcatcagtcgagtgacagacacagtaaagagcatcgtt
ccttcctggctgcagaaatacttcaagagtgaagatgctcctgaagaaggaggctctgca
ctggggacagaccagaactgccagccaccaactcctccaaatggcagcgaagaaggacct
cttccacttgatggatgcgactccccagagccaagcacaagttacactgaaccctcaacc
agccgggcatccctaaactttcagggcgatgtgctttctcgacccccactgagtcgttcg
caccatcactttccaccgctggagacctcctccccgaccctggggacctccagcggcctg
ttctcccaaccctccacctcatctgcccctggacccttttccacaggcttctccttggtc
aaagaaatcaaggacaacttctcgcagcatgaagatgataacatctcaaccacaagtggc
ttctcctcccgagcctcagaaaaagatgtccccacttccaaaacggcatcacttcctcaa
ctttggtccccagagatggagagaacacagtctgggcctcagcctgcccagtccagtctt
agaaagccttctttcaacctgtctgtatttggaacttcttccaattcgtcgttaaacagc
acagtactaaactccagccagctcggagattcacccttctaccctgggaagaccatgtat
ggtggagcagctgcagtcaggacctctcgtgctcgtcctggaaccccatatcaggcccca
ttgaggagacagatcaaggccaagcctgcttgtgctcaaccctgtggggtgaccagcgcc
acagcgagacgcatccttcagtccttggagcgaatgtcgagccccctggctgatgctagg
agaatcccagcagcagcctcgtcccccttgtcagcatcaatagatggcacaaatctagat
gtttcacaagcaaaaaggaaacgtatggattcctccctcccaccggtgcagaagctgatg
gttcctgttgcagcgttggtgtcaggaaaccgttctgtgtcctttaggccgactttgact
ccaggtggagtgagccgaactcttgacagggccccaagagagacgcctacaagaaaatca
ccgcaactacctgaagtaactccaggtccatctcgaagcacaatgatttctagtggccca
gcctatcctctgtccagcacgcctgcagccagcagcgtgagctctggagggggcaagatg
aagagggagaggaccagcacacggccttcctctaaacgccctgaagaggatgaggtggct
gaagtactggacctaccaatcatttcacttcccatcagctccgctgccttgcctaccttc
agcttctcctcctctcttccccctgttgccaccaacagcactgctcccaacatcacgcat
gtgactcctgctaaggaaattgtctcaaataaggagccaccaacggcctcgacacctccc
tctgtaccgtttacattttcctcccctattgtcaaagcgactgctgctagtcctccttct
ttttccccctcagctggattcacttttagtgcacctgcaaagttaggaccctccatgtct
aatggaaagcttgcctatcccatagaagcagccgtgaagtttgcaacaagcaaaatcact
gaagattttgaagggcctttcaagccagccaaagccctgaagcagggcagtgttttggat
cttctgaaggcacctggctttgcttctccggttgctcagccttccccaggcccagcaagc
gatctcctgcagacctccacactatccacaaccccctcctccattacaaccaccacatcc
tccccttcttcaacaagatttggcgatgtgttcaaagccccaccaggctggggctgtgat
gtctgcttggtgcagaacaagccatcagacaccaaatgtgtttgctgtatggccccacag
ccgtcttcatccaaatctatggacagtaaaccttcaacagccacctcggctgggcgagag
agcagcggcacgtacaccacctccaccactacaactactgcaggcataatgttcttcaaa
ccaggaacttgggactgtgatacatgcctggttctaaacaaacctgatgcagtgaagtgt
gtggcctgtgaaacggccaaacctgggacagggcttaaaccctcactgactcttccttct
gccttctcagctgttaagactgtatccccacctacagcccctgtttctacagggttcgtc
ggatttggagacaagttcaaaaaacctgcgggtgcatgggaatgtgatacatgtatgata
gaaaacaaggcagaggacacaaagtgtgtggcctgcaccagctctaaaccaggagcttca
gcaggagcctcttcaaccagcaatgctcaagtgtttgggttgggaaatgcattcaagatg
ccagaaggtggctgggattgtgatgcctgtcttctccaaaataaggctgcagacgtccag
tgcgttgcctgtcaggcagtcaaaccgggagctaaagtggagcccaaagcttttggttca
tccgctgctgtgacttcaggctctaattctggagtttctaactttggtacatcagacagt
acttcgggagatgaatctgtaggtttcaagtttggaggctcattgacggaatcctcctct
tcatcttcatcaggtggattcaaatttggaggcacatttggaagctcctctacagaaacc
ttttctaaagacactactgcctcatcggggttcaaatttggcagctcatctgagggcttt
aaatttgggacttcctctcgtgatgacaaaaagtcagaccaatctgctgcagctcctggt
tttaagtttggaacaagcgctgggatagtatttggaacgggctcatctaacacagagagc
aactcctcaaagggcggctttacatttggactctcaaagccagaggagaaaacggcagac
actaccaccaacccatcctcttgtagttttactcctcccgcgccctctcaggagaaaagt
gaggttgctgcatcatcaaacgacaccacatccacaaccaccgctgggtcggtatttggg
agtttggcggccaccacaccacaagggggctctacgtttggaaccttacaaaaagacaaa
gcgccagcggctcccacgtttacttttggaaagccagaggaaaagaaggaagccgctgcc
tcctcggctacgtctgccttcctcttcggtgctgctagtaaagatacagatgctgctgcg
ccagcagcggccgtctcaggaggcttttcctttagcaagcccagtgctctaacagaacaa
cctccacccgcctataattttggcaagccagcagagaagagtgaaactgcagaggccccg
aagccgtcttttagctttggacaaagtgctgcagattcttcgactgctccaaaacaagca
ttttcctttatggttggcaatgccaccaacaccgtcaactccaccacttcgtcatccacg
atcccgacgcccagtctgttcggcatcagcagttccactcaagctccggctccttctgca
gctccaagcactttcatgttcggtcaaactgctgcaacatccaatgacgctccaccagct
aaagcctttgtctttggccagagtcaggacagccagccctctgctctgtcagctgcccct
ctgaactctactcccactccagtcccagctcagccctttatctttggtgctcctgccagt
gctgctgctgctcctcctgctgctgcggctccatccttcggctttggagcagcagcaccc
actgctgcctcaactacagctccatctgcagctccctcaccatttgcattcagcccggcc
ccctctagtggatttggggccaatcagacttcttcattcggttcctcctttggatccctc
ttcccagccccaccggcccagcccccagccttcggagccaaacccaacgccacacctgtc
tttggacagcagaccaatgccacacctgtatttggggcagctgctaattctacccaaggt
ggaggctttcagtttggaggagccagtgcattcggagccacaaacaacacctcaggagga
gtgtttacttttggaccccctgcaaacccctctgttgcaccccaggcaggacccactgga
ggtggatttaattttaccaaacccccaccattcaatattgggtcaacaaaatccgtcacc
acccctcctgcaggacagccagcgattgctgggcgcaagatcaagacagcggtgcggcgc
agaaagtag
DBGET
integrated database retrieval system
