Pseudoliparis swirei (Mariana hadal snailfish): 130193742
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Entry
130193742 CDS
T09868
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4 isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130193742 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130193742 (slc1a6)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130193742 (slc1a6)
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
130193742
NCBI-ProteinID:
XP_056270404
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Position
5:complement(21588424..21600677)
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AA seq
584 aa
AA seq
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MLSAPCPVSQETCLLDQVLELIMNEKPPTSASLFLNEDAERPPIAERGDLRRRLRKAMER
KAGSLKERIGSVSRENVKGFLKRNLFVLFTVAAVALGVILGFALRPHNLSLREIKYFAFP
GELLMRMLQMLVLPLIVSSLVTGISSLDSKASGKMGMRAVVYYMVTTLIAVFIGIVTVII
IRPGKGSRDSPVTNSGNIEPVQAADAFLDLIRNMFPPNLVEACFKQYKTVYKKTVHTRNV
TVTLNLTDSLNVTESDLSVNLSRVLHTIQETVEETVPVSGSSNGVNALGLVVFSMCFGLV
IGSMKQQGQALRDFFNSLNEAIMRLVSIIIWYAPVGILFLIAGKIVEMKNLAEVGGQLGM
YTVSVIVGLLIHGLFVLPLLYFLVTRKNPFSFISGLLQALITALGTSSSSATLPITFRCL
EENNRVDKRVTRFILPVGATINMDGTALYEAVAAIFIAQVNDMDLNFGQILTISITATAA
SIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEH
LSRGELQSQDAEMRNSVIEENEKPYQLICQENDSLNHRNSETTM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgctccctgcccagtttctcaagagacctgcctcctggaccaagtgctggag
ctgattatgaatgagaagccccccaccagtgccagtcttttcctaaacgaggacgcggaa
agacccccaattgcagagagaggagacttgcggagacgcctccgaaaggccatggagagg
aaagccggcagcttgaaggagaggataggctccgtcagtcgggaaaacgtcaaaggtttc
ctcaagaggaacctgtttgttcttttcactgttgccgccgtggctctgggtgtaatcctg
ggctttgctcttcgcccccacaacctgtccctgagagagatcaagtactttgcctttcca
ggggagcttctaatgagaatgctgcagatgctggtgttgcctctcatcgtctccagtctg
gtcacaggtatttcctccttggacagcaaagcgtcaggtaagatgggtatgcgtgcagtg
gtctactacatggtgacaaccctgattgccgttttcatcggcatcgttaccgtgataatc
atccggccgggcaaaggcagcagggacagtccggtaaccaacagcgggaacatagaacca
gttcaagctgctgatgcgttcctggatctcatcaggaacatgtttcctcccaatctggtc
gaggcttgtttcaagcagtataaaacagtgtacaagaagaccgtgcacacaaggaacgtg
acagtgaccctgaacctcaccgattccctcaacgtgacagagtctgacctgagtgtgaac
ctcagcagggtgctgcacaccatacaggagacagtggaggagactgtccctgtgtccggc
tcctctaatggcgtgaacgctctgggtttggtggttttctccatgtgcttcggtctggtc
attggcagcatgaagcagcagggccaggccctcagggacttcttcaacagcctcaatgaa
gccatcatgaggctggtgtccatcatcatctggtatgctccagtcggcatcctgttcctg
attgcagggaagattgtggagatgaagaatctggcggaggtgggcggtcagctggggatg
tacaccgtgtcggtcattgtgggtctcctcattcacggcctcttcgtcctgccactgctc
tacttcctggtgaccaggaagaatcctttcagcttcatcagtggtcttctccaggcactc
atcactgctctgggaacctcatctagctctgctaccctgcccatcactttccgctgtctg
gaggagaacaaccgtgtggataaacgagtgacacgtttcatcctccctgtgggtgccacc
atcaacatggatggcaccgccctctacgaggctgtggcagccatctttattgcccaagtc
aatgacatggatctaaactttgggcagattctgaccatcagtatcacagcaactgctgcc
agcatcggagcagcaggcatccctcaggctggcctggttaccatggtgatcgtattgaca
tcggtgggactgcccacggaggacataacactgatcatcgctgtggattggttcttggac
cgcttacggaccaccaccaatgtgctgggtgactccctcggggcgggaattgtggagcac
ctttcccgtggagagctgcagagtcaggatgctgagatgcgcaactctgtcattgaggag
aatgagaagccctaccagctcatctgccaggagaatgattcactcaaccaccgcaacagt
gagaccacaatgtga
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