Pseudoliparis swirei (Mariana hadal snailfish): 130193753
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Entry
130193753 CDS
T09868
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50
KO
K25949
coiled-coil domain-containing protein 50
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193753 (ccdc50a)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
Others
130193753 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
130193753
NCBI-ProteinID:
XP_056270422
LinkDB
All DBs
Position
5:20468903..20489143
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AA seq
625 aa
AA seq
DB search
MAECDVSIDKNKLPGVKEVCKDFAVLEDHCLAYNLQEQEIESHLASNINKSRLVQKDLQV
AKKLQEEEDLRAKGQNQKQHTDIERQDNEIAQEIQDQLVRQAEQQRQQEEKDAAIARKLQ
EKEMKEEKRRQKQLEANFEEEYFEDHGAARRTLDLDKHTRNQSPSPNRYDAHAQLSPRHR
DSSPDYSSTEPKRSRYPKQDPAAPNSRSRNPEHHLVADGGRSRHADPHPEHLLTSRGRHG
DRYPDYEPTETGKARGPGREDTDRAVRRKDRPARPPPPQSPKEAWDRKHERERSRDLEWE
RQMGKEQRRDREPDLRGGRDGERSRDRGLSEDRRRERDRGLSEDRRRERDRQKRREKDGQ
RARTRSRERGLEEEPGPSRHYSREGRASWEEGGADGEGEGRARGRQRIHSGPEEVFDELD
AQGGGHSHPNGETGRIVHRVSGAVIAETVYGVSDATKGLTKLDIREQEHKDMEVARQMQE
EEIKASKMHVRTAQVAQDEEIARLMMEQEKKGYRKNREQENEREREKEKEKERERHAMER
KAMEKKAMERRRPEGDYRPNSEEVVRPRTRDEHDHQRQRNHNKAAGPPQPRAHDYENVNS
GYGYSDHPAPPRRPEAAYKGAHPRR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtgacgttagcatcgacaagaataaactacctggagtgaaagaggtgtgc
aaagactttgctgtgctggaggatcactgcctggcctacaacctccaggagcaagagatc
gaaagccacttggcgtccaacatcaacaagagccgtctggtgcagaaagacctgcaggtg
gccaagaagctgcaggaggaagaggatctgagggccaagggccagaaccagaagcagcac
actgacatcgagcgtcaagacaatgagatcgcccaggagattcaggatcaactggtccga
caggcggagcaacagcggcagcaggaagagaaggacgcggccatagcgcgtaagctgcag
gagaaggagatgaaagaggaaaagaggagacagaagcagctggaagctaactttgaggag
gagtactttgaggatcacggagctgcaagaagaaccctcgacttggacaaacacacccgt
aaccaatccccctccccaaatcgatatgatgcacatgctcaactgagcccacgtcatcgt
gactcctccccagattatagctcaacggagcccaaaaggagccggtacccaaagcaggac
ccagctgcaccaaacagccgctccagaaatcctgagcaccacctagtggcagacggaggg
cggagcaggcatgcagatccgcacccagaacacctattgacttctcgaggcaggcacggg
gacagatacccagattatgagcccacagagactggcaaagcccggggccctgggagggag
gacaccgacagagcggtgaggaggaaggaccgaccagccagacctcctcccccgcagagc
cccaaagaggcctgggatagaaaacatgagcgggaaaggagcagagacctggagtgggag
aggcagatgggaaaagagcagaggagagacagggagccggacctcaggggaggaagagac
ggggaaagatccagagacagaggactgagtgaagacagacggagagagagagacagagga
ctgagtgaagacagacggagagagagagaccggcagaagcggagagagaaagacggccag
cgagcgagaaccaggagcagagagaggggactcgaagaggagccggggcccagcaggcac
tattcaagggagggcagggcttcttgggaggagggaggggctgatggtgagggggaaggg
agggcccggggccggcaacgtatccactccggccctgaagaggtgtttgacgagctggac
gcgcagggcgggggtcattctcaccccaacggagagacaggtcgtatcgtgcaccgggtc
agcggagcggtgatcgcggaaactgtgtacggagtgagcgacgccaccaaggggttaacc
aagctcgacatccgtgagcaggagcacaaggacatggaggtggccaggcaaatgcaagag
gaggaaatcaaggccagcaagatgcacgtccgtacagcccaagtggcgcaggatgaggaa
atcgcccgactgatgatggaacaagagaagaaggggtacaggaagaacagagaacaggag
aacgagagagagcgggagaaggagaaggagaaggagagggagaggcatgccatggagagg
aaggcaatggagaagaaggcaatggagaggaggcggccagaaggagactacaggccgaac
tctgaggaagtcgtccggcccagaacacgagatgagcatgaccaccagaggcagaggaac
cacaacaaggccgccgggcctcctcagcctcgtgcacacgactatgagaacgtgaactct
ggctacggctactcggaccaccctgctcccccccgcagacctgaggctgcttacaaaggt
gcccatccgaggcggtga
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