KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130193764
Entry
130193764         CDS       T09868                                 
Symbol
polr2h
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03020  RNA polymerase
pswi03420  Nucleotide excision repair
pswi04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130193764 (polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130193764 (polr2h)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    130193764 (polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pswi03021]
    130193764 (polr2h)
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130193764 (polr2h)
Transcription machinery [BR:pswi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130193764 (polr2h)
  RNA polymerase III system
   RNA polymerase III
     130193764 (polr2h)
  RNA polymerase I system
   RNA polymerase I
     130193764 (polr2h)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130193764 (polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 130193764
NCBI-ProteinID: XP_056270452
LinkDB
Position
5:17708873..17713285
AA seq 150 aa
MAGVLFEDIFDVKDIDPDGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSFGG
LLMRLQGDANNLHGFEVDARVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggctggagttctgtttgaagatatctttgacgtaaaggacattgatccggatggcaag
aagtttgacagagtatctcgtctgcattgtgaaagtgaatcttttaagatggaccttatc
ttggatgtgaacattcaaatctatccggttgatcttggtgacaagttcaggctggttatt
gctagcacgttatatgaagatggaacaccagacgacggagagtataatcctcaggatgac
cggccatctcgagcggaccagtttgattatgtgatgtatgggaaggtttacaagattgag
ggtgacgagacttcaacagaagcagcaacgcgcctctctgcctatgtgtcttttggtggc
ctcctcatgaggctccaaggagacgccaacaaccttcacggctttgaggttgacgccagg
gtctatctcctcatgaagaaactagccttctaa

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