KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130193778
Entry
130193778         CDS       T09868                                 
Symbol
lsg1
Name
(RefSeq) LOW QUALITY PROTEIN: large subunit GTPase 1 homolog
  KO
K14539  large subunit GTPase 1 [EC:3.6.1.-]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    130193778 (lsg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pswi03009]
    130193778 (lsg1)
Ribosome biogenesis [BR:pswi03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    130193778 (lsg1)
SSDB
Motif
Pfam: MMR_HSR1 RsgA_GTPase FeoB_N AIG1 DUF1373
Other DBs
NCBI-GeneID: 130193778
NCBI-ProteinID: XP_056270476
LinkDB
Position
5:complement(18972804..18978241)
AA seq 643 aa
MSKKKAGGLGRSLIKERLQASRGNRRGDTWRHTCELNDGYDWGRLNLQSVTEQSSMDDFL
ATAEMAGTEFVAEKLNIKFVAAEARAGLLTAEERNRLKKLHEENQHLLRIPRRPHWDETT
SADVLKQTEKDSFLEWRRALAQLEEEQKLILTPFERNLEFWRQLWRVIERSDVVVQIVDG
RNPLLFRCADLELYVNEVSAHKVNMVLVNKADLLTKEQRRAWARHFQKQGLRAVFWSALA
ESERLDAEEKGMEVEEPECVESDPEEEEEEEEQPDNDILIQKGAAGEEEMKAAEQDDDDK
DSGTDEEQQVKITVNEEDWHSSSEDEEEEEGXVGSSNKSSFHNSSRLLHKDELLDVFKAC
HNGPRCREGQLTVGMVGYPNVGKSSTINTIFRNKKVSVSATPGHTKHFQTLYVEPGLCLC
DCPGLVMPSFVATKAEMICSGILPIDHMRDHVPAVSHICQVIPRHVLEGTYGFNIIRPRE
DEDPDRPPSSEEMLMAYGYMRGFMTSHGQPDQSRSARYILKDFVCGKLLYCHPPPHINVQ
DFQPQHNNFLKIDSDFCDLSSTTTSKQRKIRRIENVVDKNFFHQENVRALSKGVQSVMGY
KLGSGPVGPVQTASEMVGKPWKKHGNTNKKEKVRRLNKHLDVW
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgagtaagaagaaagcgggtggactgggtcgatctttgatcaaggagagactccaggca
agccgaggaaacaggaggggcgacacctggcgccacacgtgtgagctgaatgatggctac
gactggggacggctgaacctgcagtcagtgacggaacagagttccatggatgactttcta
gccactgccgaaatggcaggaacagagtttgttgcagagaaactcaacatcaagtttgtg
gcagctgaagccagagcaggcttattaacagctgaagagcgaaacaggctgaagaagctg
catgaagaaaaccagcatttactcagaattccaagacgcccccactgggacgaaaccaca
agtgcagatgtgctgaagcaaacagagaaagacagcttcttggagtggagaagagcgctt
gcacaactagaagaggaacagaagttaatcctcaccccatttgagagaaacttggagttc
tggagacaactgtggagagtgatcgagaggagtgatgtcgtcgttcaaattgttgatggc
agaaatcctttgctgttcagatgtgctgacctggaattgtacgtaaatgaagtgtcggcg
cataaggttaacatggtgctggtgaataaggccgacctgctgaccaaggagcagaggcga
gcatgggccagacacttccagaaacaggggctgagggcagttttctggtccgcgttggca
gagagcgaaaggctggatgcagaggagaagggcatggaagtagaggagccagagtgtgta
gagagtgacccagaagaagaagaagaagaagaagaacagccagacaatgacatcttgatc
caaaaaggagcagctggagaggaggagatgaaggcagcggagcaggacgatgatgataaa
gacagtggcacagatgaagagcaacaggtaaagataactgtaaatgaagaggactggcac
tcctcctcagaagatgaagaagaagaagaagggngagttggttcatccaataaatcctcc
ttccacaactcaagccggctgctgcataaggatgagctgcttgacgtgtttaaggcgtgt
cacaacgggcccaggtgtagagaaggacaacttacagtgggaatggtcgggtatcctaac
gtggggaagagttccacgatcaacactatcttcaggaacaagaaggtgtctgtttcagct
actcctggacacacaaagcattttcagactctgtatgtggagccaggcctgtgcctctgt
gactgcccaggtctggtcatgccctcctttgttgctaccaaagctgagatgatctgctcc
gggatcctgcccattgaccatatgagagatcacgtacctgcagtctcccatatatgtcaa
gtgatccctcgacatgtcttagaaggcacctatggcttcaacatcatcagaccacgagaa
gatgaagaccccgataggcctccctcctctgaggagatgctgatggcttatggatacatg
agaggctttatgacatcgcacggccagcctgatcaatccagatcagcccgatacatcctg
aaggatttcgtctgcggaaagcttctgtactgccatcctcctccgcatatcaacgtgcag
gacttccagccgcagcacaacaatttcctgaaaatagactctgacttctgtgacctctcc
tccacaacgacaagcaaacaacggaaaatcaggagaattgaaaatgtggttgacaagaac
ttcttccatcaggaaaatgtgcgggcactctccaagggggttcagtccgttatgggctac
aagctgggcagcggacctgtcggcccagtacaaactgcatcagagatggtggggaaaccc
tggaaaaaacacggcaacacgaacaagaaggagaaagtacgccgtctgaacaagcacctg
gatgtctggtga

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