Pseudoliparis swirei (Mariana hadal snailfish): 130193780
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Entry
130193780 CDS
T09868
Symbol
cltrn
Name
(RefSeq) collectrin isoform X1
KO
K20004
collectrin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193780 (cltrn)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNARE associated proteins
Others
130193780 (cltrn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collectrin
TMEM132_C
ECSCR
Chordopox_A13L
PRIMA1
BRCA-2_OB1
GRP
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
130193780
NCBI-ProteinID:
XP_056270481
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All DBs
Position
5:complement(27151133..27159445)
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AA seq
212 aa
AA seq
DB search
MSWTAVLLLAGLSCAWAQPLCSPGSTDGYKVRLSIKSALGDQAYVWNKNEMFLFRATLAF
AMRTHSDGLEYDVANVVVCDETPRVSFWFVVTSPLNATQLVDKRQVEEAVRKSRGRINSA
FLLSDDTLEFIGILPTLEAPAVPATAPWLIAFGVVMGAVCASIVVVLVSSVVQKKRKNKQ
KHDGEEKTVENEAARDGVYNLSFSDEEPVTQM
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggacggccgtgttgctgctcgccggcctctcgtgtgcgtgggctcagccgctg
tgctcgccaggttcaactgacggctacaaagtccgactcagcatcaaatccgctctggga
gatcaagcttacgtctggaataaaaatgaaatgttcctcttccgagccactctggccttc
gccatgaggacgcactccgacggcctggaatacgacgtggccaacgtggtcgtgtgtgac
gagacgccgcgggtgtccttctggttcgtggtgacgtcgccgctcaacgccacgcagctc
gtcgacaagcgtcaggtggaggaggcggtgagaaagtccaggggccgcatcaacagcgcc
ttcctgctgagcgatgacaccctggagttcatcggcatcctgcccaccctggaggcgccg
gcggtcccggccacggcgccgtggctcatcgccttcggggtggtgatgggcgccgtgtgc
gccagcatcgtggtcgtgctcgtgtcctctgtggtgcaaaagaaacgcaaaaacaaacag
aagcatgacggcgaggagaagacggtggaaaacgaagccgcaagagacggcgtttacaac
ctgtcgttctccgacgaggagccggtgacccagatgtag
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