Pseudoliparis swirei (Mariana hadal snailfish): 130193786
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Entry
130193786 CDS
T09868
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130193786 (hmg20b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
130193786 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4763
HMG_WDHD1
Protamine_like
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
130193786
NCBI-ProteinID:
XP_056270491
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All DBs
Position
5:complement(23338660..23343299)
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AA seq
294 aa
AA seq
DB search
MGGIKQEQSDASHQSKPSHSADPPQEEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RRERMRARYPDLPFPEITKRLGAEWTQLALNDKQRYLDEAEREKMQYAQELKDYQQTEAY
QITSAKIQDKRIKKEDTPSVIISTSSESSVSKPSDLPRGFDIPIFTEEFLDQNKARESEL
RRLRKANIEFEEQNAVLQRHIKDMYSAKERLEAELGLDEKRTQALHQNLLTIKHTLVNSL
SSVPLPGTGETASHGNLDSYLSCLNGALEGNPHKHRALLSQLCEVLAHLDSEKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggatcaaacaggagcagagtgatgcctcgcaccagtctaaaccatcacactcc
gcagatccgccgcaagaagagccgaagaagagaggctggccgaagggaaagaagagaaag
aaggtgctaccaaacggtcccaaggcgccggtaaccggatacgtccgcttcctgaacgag
cggcgagaacgcatgcgggccagatacccggacttaccgttcccagaaatcaccaagagg
ctcggagcagagtggacacaactggccctgaacgacaaacagcgctacctggacgaggcg
gagcgggagaagatgcagtacgcccaggaactgaaggactatcagcagacggaggcctat
cagatcaccagcgcgaagatacaagacaagaggatcaagaaagaagacacgccgtctgtc
atcatcagcacgagttcagagtcctccgtatcaaagccgtctgacctccccagaggattc
gacatccccatcttcacagaggagttcctcgatcagaacaaagctcgggagtctgagttg
cggcggctccgtaaggccaacattgagtttgaggagcagaacgcggtgcttcagcgccac
ataaaggacatgtacagcgccaaggagcgcctggaggccgagctggggctggacgagaag
cgcacccaggctctccaccagaacctgctgaccatcaaacacacactggtcaacagtctg
tcgtcggtgcccctgccaggcacaggagagacggcgtctcacgggaacctggactcctac
ctaagttgtctcaacggagcgctggagggaaaccctcacaagcaccgcgcgctgctcagc
cagctctgcgaagtcctggctcacctggacagcgagaagttgtga
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