Pseudoliparis swirei (Mariana hadal snailfish): 130193789
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Entry
130193789 CDS
T09868
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04370
VEGF signaling pathway
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130193789 (kdr)
04370 VEGF signaling pathway
130193789 (kdr)
04020 Calcium signaling pathway
130193789 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130193789 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130193789 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130193789 (kdr)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130193789 (kdr)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
130193789 (kdr)
CD molecules [BR:
pswi04090
]
Proteins
130193789 (kdr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
V-set
Ig_VEGFR-1-like_5th
C2-set
Sp38
Haspin_kinase
Enas
Motif
Other DBs
NCBI-GeneID:
130193789
NCBI-ProteinID:
XP_056270496
LinkDB
All DBs
Position
5:26198625..26215792
Genome browser
AA seq
1362 aa
AA seq
DB search
MMAGSVVALLAVALRITCVAAIELRFTPDPPALSVPGVHRMNRSDDLELTCRGRQQLTWS
TPPTASRFSASGACSGAGLFCSTLSIANATANETGRYRCSYRDLRAEDGKTSAEVYVFVR
DLKVPFVPPEKEYKVVVIREGERVVIPCRGSVEELNVTLHTKYPNKELRPDGKDSLWDAR
TGFTVPSHLISYAGVVFCQTRIGDETFESPQYIVAVVGYKIYKLTMNPTQLRLAAGERLV
LGCTAETELNVGLEFNWTHSGQALTSSNGSRPSQTTPYKKKLWNTLEFSNMLTVENVTVQ
DSGAFTCSASSGKMERSAAATLRVFEKPFIDMKETWTKVWEVNAGGQMSIPVKFSAYPDP
VSRWLKNGVPLKEDYRVKQRSDALVIRGAVETDAGSYTVVLTNNITREERRRSFQLLVNV
PPRIIEKEVAVDSDVFPYGSSPTLRCTARGFPAPAGVRWQWMSEEDCPEAFRLLRSGLVK
SEAQLAACAAWRDVSNSTGHRPVERIVTDGEHAQKKITSSLKIQRAEAHAFYRCTAANKV
GEDSRIIFFHVTRGLEVSVSPAGGPLEEDHVVLRCKADKLIYGNLTWLGVTNVSRSEQIA
PVQPCRPWWNVTALGDDLERRPPSRVALSGLQGANVTLELSLPDASRRDEGLYACQVENI
KTREKTCLMRRLSLRGLEAARILNNLTDQKVNVSATVSFRCDATGTPDPTVVWTKNNRTV
VEGSGVILSERNHVLTVQRVKKEDSGRYTCTACNGRGCDSVQADLTTEGAEEKTNVELIV
PIGSVVIAMFFWLLIVFVIRGRKRPRGGDVKTGYLSMILDSEDTPMDEQCERLTYDASKW
EFPRDRLKLGDPLGRGAFGQVVEAAAFGIEKAATCTTVAVKMLKEGATSSEYRALMSELK
ILIHIGHYLNVVNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKQRKRADSQ
WASAEEDLAGGDLGLGKVAQLDICTGTAVCSSAGGRASSGSGVAAQEESSDEDHLTMEDL
ISYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDA
RLPLKWMAPETIFDRVYTTQSDVWSFGVLLWEIFSLGASPYPGVCIDELFCRRLKEGTRM
RPPDYATTEMYQTMLDCWLERPTDRPTFAELVEHLGNLLQASAQQDGKDYIPLMVGGEAE
GSPVTPDPRNPYNRPQSREILAAQLHYDNLPSLGPPGPSERCGRPLSVKTFEDIPAARSI
VMESHTDSGMCFSPEEVKALNQQLPTTPNFSQLLRFKSKESLASESSNQTSGYQSGYHSD
DADGPVYANEEAILKHNVLKKPPLNRTPDKFNAEIRYSTPPV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggctccgtcgtcgcgctgctggccgtcgctctgaggatcacgtgtgttgct
gccatcgaactgcggttcacgcccgacccgccggcgctgagcgtccccggcgttcaccgg
atgaaccgatccgacgacctggagctgacgtgcagaggtcggcagcagctgacgtggtcc
acgccgccgaccgccagccgcttctccgccagcggcgcctgcagcggggcggggctcttc
tgctccaccctgagcatcgccaacgccaccgccaacgagaccgggcggtaccggtgctcc
taccgggacctgagggcggaggacgggaagacgtccgccgaggtctacgtgttcgtccgc
gacctcaaggtgcccttcgtgccgccggagaaggagtacaaggtggtggtgatccgggag
ggggagcgcgtggtgatcccgtgccgcggctcggtggaggagctgaacgtcacgctgcac
actaagtatcccaacaaggagctccggcccgacgggaaggactcgctgtgggacgccagg
accggcttcacggtgccgagtcacctgatcagctacgccggcgtcgtgttctgccagacg
cgcatcggagacgagacgttcgagtccccccagtacatcgtggccgtagtggggtacaag
atctacaagctcaccatgaaccccacgcagctccgcctggccgccggggagcggctggtg
ctcggctgcacggccgaaaccgagctgaacgtgggcctcgagttcaactggacgcactcc
gggcaggcgctgacctccagtaacggctccaggcccagccagacgacgccctacaagaag
aagctgtggaacacgttggagttctccaacatgctgacggtggagaacgtgacggtgcag
gacagcggagcgttcacctgctccgcctccagcggcaagatggagaggagcgccgccgcc
acgctgcgagtgttcgagaagccgttcatcgacatgaaggaaacgtggacgaaggtgtgg
gaggtcaacgccgggggtcagatgtccatccccgtcaagttctctgcctacccggacccc
gtctccaggtggctgaagaacggcgtccccctgaaggaggactaccgggtgaagcagagg
agcgacgccctcgtgatccgcggcgccgtggaaacggacgccggcagctacacggtggtc
ctgaccaataacatcacccgagaggagaggaggcggagcttccagctgctggtcaacgtg
cctcctcgtatcatagagaaggaggtggcggtggactctgacgtgttcccgtacggcagc
agtcccaccctgaggtgcacggctcggggtttccccgcgcccgccggcgtccggtggcag
tggatgtccgaagaggactgccccgaggccttcagactcctcaggtcggggctcgtgaag
tcagaggctcagctggcggcgtgcgcggcgtggagagacgtcagcaacagcaccggtcac
cggccagtggagcgcatcgtgacggacggcgagcacgcccaaaagaagatcacgagctct
ttgaagatccagagagccgaggcccacgccttctaccggtgcactgccgccaacaaagta
ggggaggattctcgcatcatcttcttccacgtcacacgcggcctggaggtgagcgtgtcc
cccgccggcgggcccttggaggaggaccacgtggtcctgcgctgcaaggcggacaagctc
atctacggcaacctcacctggctcggcgtgaccaacgtgtcgcggtcggagcagatcgcc
ccggtgcagccgtgccggccgtggtggaacgtcaccgcactcggggacgacctggagcgg
aggcccccgtctcgcgtggcgctctccggcctgcagggtgccaacgtgaccctggagctg
tcgctgcccgacgcctcgcgccgggacgaaggcctctacgcctgccaggtggaaaacatc
aagacgcgggagaagacctgcctgatgcgccgcctttctctcagaggtctcgaggctgcg
aggatcctcaataacctcaccgaccagaaggtcaacgtgagcgctacggtcagcttccgg
tgcgacgccaccggcacgccggaccccacggtggtctggaccaaaaacaaccgcacggtg
gtggagggctcaggcgtgattctgagcgagcgcaaccacgtcctgacggtgcagcgcgtg
aagaaggaggacagcggccgctacacctgcacggcctgcaacggccgcggctgcgacagc
gtgcaggccgacctgacgactgaaggtgccgaggagaagacgaacgtggagctgatcgtc
cccatcgggtcggtggtcatcgccatgttcttctggttactcatcgtcttcgtcatccgc
ggaagaaagagaccacgtgggggagatgtgaagacgggctacctgtccatgatcctggac
tcggaggacacgcccatggacgagcagtgcgagaggctgacgtacgacgcctccaagtgg
gagttccctcgggacaggctgaagctaggtgacccgctgggacgaggagcgttcggccag
gtggtcgaggcggccgccttcggcatcgagaaagccgccacgtgcaccaccgtcgcggtc
aagatgctcaaagagggagccacgtcgagcgagtaccgcgccttgatgtcggagctgaag
attctcattcacatcggacattatctcaacgtcgtcaacctgctgggagcctgtacgaag
cccggaggcccactgatggtgatcgtggagtactgtaaacacggaaacctctccagctac
ctgaagagcaagcgtggagagtacagcccctacaagcagaggaagcgagcggacagccag
tgggcgtctgccgaggaggatctggccggaggggatctgggccttgggaaggtcgcccag
ctggacatctgcacgggaacagccgtctgctccagcgccggaggccgggcgtcttccggc
agcggcgtggcggcgcaggaagagagctcagacgaggaccatctgaccatggaggacctg
atcagctacagcttccaggtggcgaaaggcatggagttcctggcgtcccgcaagtgcatc
cacagagatctcgccgccagaaacatcctgctgtcggagaacaacgtggtgaagatctgc
gacttcggcctcgccagagacgtctacaaagaccccgactacgtccgcaagggagacgct
cgcctccctctgaagtggatggctccggagaccatcttcgatcgggtgtacaccacgcag
agcgacgtctggtccttcggagttctgctctgggagatcttttctctgggtgcgtcgccc
tatccgggcgtttgcatcgacgagttgttctgcaggaggctcaaggagggaaccaggatg
agacccccggattacgccaccaccgagatgtaccagaccatgttggactgctggctggag
cgacccacggacaggccgacattcgcagagctggtggaacatctgggcaacttgctgcag
gccagcgcccagcaggacgggaaggactacatccctctgatggtcggcggcgaggcggaa
ggctcccccgtgacccccgaccccaggaacccctacaacaggccacagagcagggagatc
ctggcggcgcagctgcactacgacaacctgccgtccctcggacctccggggccgagcgag
cggtgcggccgacccctcagcgtgaagacgttcgaggacatccccgcggcgcgcagtatc
gtcatggaaagtcacacggacagcggaatgtgcttctcacctgaggaggtgaaggctttg
aatcaacagctgccaacgacacccaacttcagccagctgctgcgcttcaagagcaaagag
tctctggcgtcggagtcgtccaatcagacgagcgggtaccagtcggggtaccactccgac
gacgcggacggccccgtctacgccaacgaggaggccatcctgaagcacaacgtgctgaag
aagcctccgctgaacaggacgccggacaaattcaacgcagagatccgctacagcacgccg
cccgtctga
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