Pseudoliparis swirei (Mariana hadal snailfish): 130193808
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Entry
130193808 CDS
T09868
Symbol
pomgnt1
Name
(RefSeq) protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
KO
K09666
beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00515
Mannose type O-glycan biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
130193808 (pomgnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130193808 (pomgnt1)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130193808 (pomgnt1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNT-I
ILEI
Motif
Other DBs
NCBI-GeneID:
130193808
NCBI-ProteinID:
XP_056270538
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Position
5:complement(8807256..8824620)
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AA seq
653 aa
AA seq
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METWTPNPRAKPFIPRQQRSLYLTWKYKLTNKRTIRRFCQAGAVLFLLITVIVNIKLILD
TRRVADEDAAAQAYEDTIPNMETPRRPAKGRKILDIEVYSSRSKVYVAVDGTTVLEDDMP
EQGRGIHVIVLNQATGHVMAKRIFDTYSPHEDDAMILLLNMVTRGRVLIFTIKDEGTFHL
KEAAKNLLKSLGSQVSLNLSWRDMWTLVVKKGGQVYGERHSKSPALSTWGDPVLLKTEVQ
LTASEEAECHWAATELNKRRKLFCSKVEGYGSICSCKDPAPIEFNPDPIPNNNILNVPVA
IIAGNRPNYLYRMLRSLLSAHGVNPQMITVFIDGYYEEPMDVVELFGLKGVQHTPISIKN
ARVSQHYKASLTATFNLHPEANFAIVLEEDLDISIDFFSFLSQTLHLLDEDDSLYCISAW
NDQGYEHTAEDPALLYRVESMPGLGWVLKKSIYKDELEPKWPTPEKLWDWDMWMRMPEQR
KGRECIIPDVSRSYHFGIVGLNMNGYFHEVYFKKHRFNTVPNVQLRNVDSLKQAAYEVEI
QNLLKLAEVLDHTKNPCEDSFLPDSEGKTYIMYIQMETETDTSTWTELSKCLHVWDLDVR
GYHRGLWRLFRKRNHVLVVAVPISPYSVTKPASVTPIHLEPPPKEEGAPVEQM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagacctggacccccaatcccagagccaagccgttcatccctcgccagcaaagaagc
ttgtacctcacctggaaatacaaactaaccaacaagaggacgattcgtcggttctgtcag
gctggcgctgtgctgtttctgttgataactgtgatcgtcaacatcaaactcatcttggac
acgagaagagtagctgatgaagatgcagcggctcaagcatatgaggacacgatacccaac
atggagaccccacgcaggccggctaagggacgcaagatcctggacattgaggtgtactcc
agccgctccaaggtctacgtggctgtggacggcaccactgtgttggaggatgatatgcca
gagcagggcagaggcatccatgtgatagttctcaaccaggcaactggtcatgtgatggcc
aagaggatattcgacacctactctccccacgaggacgatgccatgatcctcttactcaac
atggtgacccggggtcgagtcctcatctttaccataaaggatgagggcaccttccacctg
aaggaggctgcgaagaacctgttgaagagtctcggcagccaggtgtccctcaacctcagc
tggagggacatgtggactctggtggtgaagaaaggaggccaggtgtatggagaaaggcac
tctaagtctccagctctgtccacctggggagacccggtgttgctgaagactgaggtgcag
ctcaccgcctctgaagaggcagagtgccactgggcagccactgagctcaacaagaggagg
aagctcttctgcagcaaagtggaagggtacggcagcatctgcagctgcaaagacccggcg
cccatcgagttcaaccctgaccctattcccaacaataacatcttgaatgtcccagtggcc
atcatcgcagggaacagacccaactatctctacaggatgctgaggtctcttctctcagct
cacggcgtcaacccgcagatgatcactgtcttcatcgatggatattacgaggagccgatg
gatgtcgtagagctgtttggactgaagggagttcagcacacgcccatcagcatcaagaat
gccagagtgtcccagcactacaaggcgagtctgactgcaaccttcaaccttcacccagag
gccaactttgctattgtccttgaagaagacttggatatctccatcgacttcttcagtttt
ctcagtcagaccctccacctgttggacgaggacgacagcctctactgtatttccgcctgg
aacgaccagggctatgagcacacagcagaggacccggccctgctgtacagagtggagagt
atgcccgggctgggctgggtgctgaagaagagcatctacaaggacgaactggagccaaag
tggccgacgcccgagaagctgtgggactgggacatgtggatgcggatgccggagcagagg
aaaggccgagagtgcatcatccccgacgtgtcccgctcgtaccatttcggcatcgtcggc
ctcaacatgaacggctattttcatgaggtatattttaagaaacaccggttcaacaccgtt
cccaatgtgcagctgaggaatgttgacagtttaaagcaagctgcttatgaggtggagatc
caaaacctgttgaagttagcggaagtactggaccacacaaagaatccgtgtgaggattcg
ttcctgccagactccgaggggaagacctacatcatgtatattcagatggagacggagaca
gacacatccacctggacggagctctccaagtgcctccatgtttgggacctggatgtccgg
ggataccaccgaggcctgtggcggctcttcagaaaaaggaaccatgtccttgtggtggcc
gtgccgatctccccatactctgtgacgaaaccagccagtgtcactcccattcacttggag
cctccgcccaaagaagagggagcaccggtggagcagatgtag
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