Pseudoliparis swirei (Mariana hadal snailfish): 130193827
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Entry
130193827 CDS
T09868
Symbol
apc2
Name
(RefSeq) adenomatous polyposis coli protein 2
KO
K02085
adenomatosis polyposis coli protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130193827 (apc2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130193827 (apc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130193827 (apc2)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130193827 (apc2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130193827 (apc2)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130193827 (apc2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130193827 (apc2)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
130193827 (apc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_basic
Arm_APC_u3
APC_rep
APC_N_CC
Arm
SAMP
APC_r
Suppressor_APC
HALZ
CCDC138_cc
Sec7-like_HUS
bZIP_1
Motif
Other DBs
NCBI-GeneID:
130193827
NCBI-ProteinID:
XP_056270562
LinkDB
All DBs
Position
5:12896992..12926135
Genome browser
AA seq
2509 aa
AA seq
DB search
MANAVTSYDQLAHQVEALRKENSHLRRELEDNSNHLSKLETETTGMKEVLKQLQSKLEQE
AGTLASSGRSDVLHQLTELHMDLTNYYELKHQPHNLRLLTDSLEGAELDDYLASCPSASA
VSRARSPLRGPSHLSAVSGVEAAAMLLPHHFLDGAPPKTAVITGADGRMSDHHQEELYKE
RNLLLGEIDREERERCWHFSQLEELSQRLVQLPRIDAFSLQMDMIRQQLEFEAQRVRSVM
EERFGTSDEMVQRSQIRVTRLEQLEIELQEARGSQETQLQLSGAEKPPAGEPESNTSSAA
AAGAESPTDGGSKVEMVFWLLSMLANRDKEEMSRTLLALSSSQDSCIAMRKSGCVPLLVQ
ILHEAPCGGASGPEEAAAAGTATGCSREAKSRASAALHNIIYSQQDEGQARREMRVLHML
EQVRTYCDSGWDWIEGHAATPSPGGTKTTDIPEPVEPQICQAMCAIMKLSFEEEYRRAMN
ELGGLQVVADLIHLDQDMYGMLNDPINMALRRYAGMAVTNLTFGDVANKATLCSKKSCLQ
ALVAQLASDSEELHQVVSSILRNLSWRADITSKKVLRDIGCVSALMTCALQATKESTLKS
LLSALWNLSAHSIENKVSICSVDGALGFLVSTLTYRCQTNSLAIIESGGGILRNVSSLVA
TREDYRQILRDHNCLQTLLQHLRSHSLTIVSNACGTLWNLSARSMKDQELLWDLGAVSML
RNLIHSKHKMIAMGSAAALRNLLTNRPLKYKDAAVISPGSCMPSLYMRKQKALEAELDAK
HLAETFDTLEKQSPKHLTLNKPLRHIESLAKDYASDSGCFDDDEAPNVSSSLDTGSFSML
SMFLTNSNFLQSQPRKRDTDPERDVDMPQMVDKRHAPVDDVSAAAETLAKRITNTVAKID
RLVEDITMHTSSEDSFSLSSEDHLADWPYGLDELNEAQAKSCSPCPLSETSSLAHRERLS
RAHALLRLKTAHTSLSTDSLNSGSTSDGYCGSKDQMQTAPRTVMMQQRPNQLDLKGAHQD
YLNVSPAVLMETNQQDIPERDSMDNKDLRDLELSITDAEMNQDQSVQTPLSASTKLSSDV
SMTSIQLSPSYQQVPLIQSVAKFGVAKTAINVQAAQAMRRQAWVPTVMTGGSVTKCSPMT
STRSPTVGSMETVQKYSVENTPICFSRCSSLSSLSSGDGALDGQSENELESDSSLEIIEV
EDGEVVKRAEEDETLEDLSDSQLLMTDSKTFPSKETDPIEIPCPAKKEKVFLRGASPTLL
EDRSPSSSSENYIHETPLVMSRCSSVSSLGSFEASSIASSIESDPGSEMNDGTISPSDLP
DSPGQTMPPSRSKTPCCVESNGAETQATGIAGQWESSLRTFMEIADSKERFNLPPDLDTM
IYFTVEKPSENFSCASSLSALPLHEHYIQKDVELKLTPLLQQNDKNLPFPDEDEQGFDHG
ERYSEGNSDDDIEILKECINSAMPSKFRKVRPSLMTTIPHHILNSQIRKQMHLPMYMMLP
NGKTQMCPGRRIVIPQKDFKFDDSSFTDSAEGTPVNFSSTTSLSDETLQYPVKERGAKDC
TAKGMNKQELLDDEAKRIEDLRIFSHFHKPNRINYPPEIQMNRTTKHIIPTQKVLMQSKE
VADRVAKQRIRDQSPNQQKKRQVQGPVRKLDLPVIKKKTASNLNVGSQKGKTFYRQSTNS
SEDSVSFYSDKKEAMKQTSRKQIREAKRNTLSRSMTNIGRIDNSQAMPRGFHRIKENLMK
DESLACYSLSSSLSSLSDAEFEDQKSRAHQIWYKNKHNKTLNMMKQTKFMNIHSQYEEPS
SPSSVSMDSEDDLLQKCITSAMPKQRRKHAARKKKAENTQKQKASDGWDEEMDSDDTAWD
QDSDLNSVEWRAIQEGANCVVTGLQASKSQEPSSEETESVLSFMSTSSFTPKERKFAKDK
KANKPLDFAQRKPVPNLPVVFRGRTVIYTPKKETAPSQIPPPRKVPTKTDAPKNPNLAQH
RSKSLHRLGHPQDIELSLPKRSSTPPPRIPKSSSSGSSQSSTPSKQSQKRITSPTQTNKF
MQKKIASPPNSPPASSPPERKGRSPVVNKYEKSPPPKTQKSPVRIPFMQNSVRPRALSPL
VTNLTTTKQTNQVNGKRVPPANRFGMVRMTSAHSSGGESERNGFLRQLTFIKESQPVLRR
HGSARKMPGSQNGSPQRAAPGTSAVFLCSSRCQELKVAVQTQRRVQVKNPRQAQQVQRPE
HSVQKQTPTLSRATSSERDLSARRTHRRTSSESPCRGAERNRHSRVSAAKQQQDQDNFKR
HASSPSINILSRVTSRSSLRSSSSDSSGRAKSEDDTKKKGHRSASRLNDRVTWRRIRDED
VPQILKSTLPANALPLMPSPDGEQPKPPALPGKLPTIVLASRKTSDATVQTEDFSNNKTN
SSTSPTVVTTRVIAEEVARFALLRKSTATSGSNPQDGDSEVSLKSHSTVSTGTSDIHVGG
AVHFRQGSPSKAARITPFNYTPSPISCSLQDTQSQEATIDERPEGKSES
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgctgtgacttcctacgaccagctggcccaccaggtggaggctctccgtaag
gagaactcccacctgaggagggagctggaggacaactccaaccatctgtccaaactggag
accgagaccaccggcatgaaggaggtgttgaagcagctgcagagcaaactggagcaggag
gcaggaacactggcctcgtccgggaggagcgacgtgctgcaccaactgacagagctccac
atggacctcaccaactactacgagctcaagcaccagcctcacaacctgaggctgctgacg
gacagcctggaaggggcggagctagacgactacctggcttcctgcccctctgcctcggcg
gtgagcagagccaggagtccactccgaggcccgtcacacctgagcgcagtgtccggcgtg
gaggcagccgccatgttgttgccgcatcacttcctggacggggcaccacccaaaacagct
gtgatcaccggggcggatggacgaatgagcgaccaccaccaagaggagctgtacaaggag
aggaacctcctgctgggggagatcgaccgggaggagagggagcgctgctggcacttcagc
cagctggaggagctgtcccagagactggttcaactgcctcgcatcgacgcgttttctctg
cagatggatatgatccggcagcagctggagtttgaagcccagcgggttcgatctgtgatg
gaggaacgttttggtaccagcgacgagatggttcagaggtcacagatacgagtcactcgt
ctggagcagctggagatagagctgcaggaggcccgagggagtcaagagacccagctacag
ctttctggagctgagaagccccctgctggagaaccagagagcaacacgtcatcagctgct
gcagcaggagccgaatctccgacagacggcggcagcaaggtggagatggtgttctggctg
ctctccatgctcgctaacagagataaggaggagatgtctcggactctgctggctctgtcc
agctctcaggacagctgcatcgccatgaggaaatctggctgcgtccctctgctggtccag
atcctgcacgaagctccgtgcggaggcgccagcggacccgaggaggcggccgcggccggt
acggcaacgggctgcagcagagaggccaaatccagagccagcgccgccctccacaacatc
atctactcccagcaggacgagggccaggcccgccgggagatgagggtgctgcacatgctg
gagcaggtccggacctactgtgacagcggctgggactggatcgagggccacgcagcgacg
ccgtcacctggaggaaccaaaaccaccgacatccctgaacctgtggagcctcagatctgt
caggccatgtgcgccatcatgaagctttcctttgaagaggagtaccgacgcgccatgaat
gaattgggcggcctgcaggtcgtggccgatctgatccacctggaccaggacatgtacggc
atgcttaacgaccccatcaacatggctctgcgccgctacgcagggatggctgtgaccaac
ctcacctttggagacgtcgccaacaaggccactctgtgctcaaagaagagctgtctccag
gctctggtggcccagctggcctctgacagtgaggaacttcatcaggtagtctccagcatc
ctgaggaacttgtcctggagggccgatatcaccagcaagaaagttctcagagacatcggc
tgcgtttctgcactgatgacctgtgccctccaggccaccaaggagtcgacattgaagagc
ctcctgagtgctctatggaatctgtcggctcacagcatcgaaaacaaagtgtcaatctgt
tcagtggacggcgctctgggcttcctggtcagcacgctgacataccgctgtcaaaccaac
tcgctcgccatcatcgaaagtggaggaggaattcttcgaaatgtgtcgagtctggtcgcc
acacgtgaagactacagacaaatcctcagggatcacaactgcctccagactctgctgcag
cacctgcgctcccacagcctgaccatagtgagcaacgcctgcgggacactctggaacctt
tctgcccgaagtatgaaggaccaggagctgctgtgggaccttggggcagttagcatgctg
cgcaaccttatccactccaagcacaagatgatagcaatgggcagtgccgcagctttaagg
aatctcctcactaatcgacccttaaaatataaggatgctgcagtcatatcccccggctcc
tgcatgccctcactctatatgaggaaacagaaggcgctggaggcggagctggacgccaaa
cacttggccgagacttttgatacccttgagaaacagagccccaaacatctgaccctcaac
aagccactacggcacattgaaagtctggcgaaggattacgcatctgattctggttgtttt
gatgatgacgaggccccaaacgtctccagtagcctggacactgggagcttctctatgcta
tccatgtttcttaccaactctaacttcctgcaaagccaaccacgcaagagggacactgac
cctgaaagagatgtagacatgcctcaaatggttgacaagagacatgctcctgttgatgat
gtatctgccgctgcagagacgctcgcaaaaagaatcaccaacacggtagccaagattgac
aggttagtggaggacatcaccatgcacacatcctctgaggatagtttcagcctgagctct
gaagatcacctggcagactggccatacggactggatgaactcaatgaagcccaagcaaaa
tcatgctccccctgccctctgtctgaaacaagcagcttggcccacagggaacgcctcagt
agagcccacgctctcttgcgcctcaaaaccgcccatacaagtctatcaacagacagctta
aacagtggaagcaccagtgatggctactgcggcagcaaggaccagatgcaaactgctcca
agaactgttatgatgcaacaaagaccgaaccaacttgatctcaagggagctcatcaagat
taccttaatgtaagtcctgctgttctgatggagacaaaccagcaagacattccagagaga
gattctatggacaacaaagatctgagagatctagagctcagcatcacagacgcagaaatg
aaccaggatcaatctgtacaaacacctctcagtgcatcaactaaactctcctctgatgtg
agcatgacttcaattcaactgtctccttcttatcaacaggtcccactcattcagagtgtc
gccaaattcggtgtagcaaagacggccattaatgtccaagctgcccaagcaatgaggagg
caagcatgggtacctactgtgatgactgggggtagtgtaacaaaatgttctccaatgaca
tccaccagaagcccgactgtcgggtcgatggagacggtccagaaatactcagtggaaaac
accccgatttgcttctctcgctgcagttcattatcctccctctcttctggcgatggagcg
ctcgatggacaaagtgagaatgagctagagagtgactcgtcattagaaataattgaagtg
gaggatggagaagtagtgaagagagcggaagaggatgaaaccttggaggatctgagtgac
agccagctgctgatgactgactcaaaaaccttccccagcaaagagaccgatcccattgaa
attccctgtcctgccaaaaaggaaaaggtgttcctaagaggagcttcaccaaccttactt
gaagatagatctccatccagttcatctgagaactacatccacgagacacctttagtaatg
agtcgctgtagctcagtgagttcactgggcagctttgaggcgagctcaattgcgagctca
atcgaaagtgatccaggcagtgagatgaatgatggaacaataagcccaagtgatcttccc
gacagcccaggtcaaaccatgcctcctagtcgaagtaaaactccatgttgtgttgagtca
aatggagcagaaacacaggccacaggaatagcgggtcaatgggaaagtagcttgcgaaca
ttcatggagattgcagactccaaagagaggtttaaccttcctcctgacctggacactatg
atctactttactgtggaaaagcccagcgagaacttctcttgtgcatcgagcttaagtgct
ctgcctcttcacgaacactacatacaaaaagatgtggaactgaaattgacccccctactc
cagcaaaatgacaaaaatcttcctttccctgatgaggatgagcaaggattcgaccatggt
gaaagatatagtgagggcaattcagatgatgacattgaaatcttaaaggaatgcataaac
tcagcaatgccctctaaattccgaaaagtaagaccttccctgatgacaaccatccctcat
catattctcaattcccagatccgaaaacagatgcatcttccaatgtacatgatgcttcca
aatggcaaaacccaaatgtgtcctgggaggagaattgttattccacagaaggactttaaa
tttgatgattcatccttcactgattctgcagaaggtacaccagtcaacttctccagcaca
acatcactaagtgacgaaacacttcagtatccagtgaaggagagaggggctaaagactgc
acagctaaaggtatgaacaaacaggaattgctcgacgatgaggcaaagaggatagaagac
ttgaggatattctcacacttccataagcccaacagaattaactacccaccagagatacaa
atgaaccgaacaaccaaacacatcattcccactcagaaggtgcttatgcagagcaaagag
gtagctgatagagtggcaaagcaaagaattcgtgatcagtctcctaaccaacaaaagaag
aggcaagttcaagggccagttaggaaactggatctgcctgtcattaagaaaaaaacagca
agtaatcttaatgtgggatcacaaaaaggtaaaacattctacagacaatcgacaaattct
tcagaggacagtgtcagcttctattctgacaaaaaggaagcaatgaaacaaacaagtaga
aaacagatcagggaagcaaaaagaaatactctttcccgtagcatgacaaatattggcagg
attgataattcacaagcaatgcccaggggatttcacaggataaaagagaatctgatgaag
gatgaatccctggcatgttactcactcagctcctcacttagttcactgagtgatgcagag
tttgaggatcagaaatcaagagcccatcaaatttggtacaaaaacaaacacaacaaaaca
ctaaatatgatgaaacaaacaaagtttatgaacattcacagccaatatgaagagccaagc
tcgccaagctctgtcagtatggattcggaggatgacctccttcagaaatgcataacatct
gccatgcccaagcagagaaggaagcatgctgcaaggaagaagaaagcagaaaatactcaa
aaacaaaaggcctctgatgggtgggatgaggaaatggatagtgatgacacagcatgggat
caagattcagacctcaatagtgttgaatggagagccatacaagaaggggctaattgtgtt
gtaactggactccaggcctcaaagtctcaggagccatcctctgaagagactgaatccgta
ctgtcattcatgtcaacatccagctttacacctaaagaaaggaagtttgctaaagacaaa
aaggcaaataaacctttagactttgcacagcgcaagccagttccaaatttacctgtggtt
ttcagaggcaggacagtgatctatacgccgaaaaaagagacagctccatcacaaatacct
cctcccagaaaagtaccaaccaagacagatgctccaaaaaatccaaacctggctcagcac
agatcaaagagccttcaccgattaggtcacccgcaggacattgaactgtctttgccaaag
aggagctctactccacctccaaggataccaaaaagttcatcctctggatcatcgcaaagc
tctacaccatccaaacagtcgcagaaaaggataacatccccgactcagacaaataaattc
atgcagaaaaagattgcctcaccacctaatagcccgccagctagtagtcccccagaaaga
aaggggcgctctcctgttgtgaataaatatgaaaaatccccaccacctaaaactcaaaag
tcacctgtccgaatcccttttatgcaaaactcagtcaggcccagagctctgtcacctctg
gtaactaacctaacaaccaccaaacaaaccaatcaggtcaacgggaaaagggtcccaccc
gccaatcgatttggaatggtcaggatgacttctgcccattcaagtggcggtgagtctgag
cgcaatggattcttgagacagctaactttcattaaggaatcacagcctgttctgagaagg
catggctctgcacgcaaaatgcctggatctcagaatggatccccccaaagagcagctcct
ggcacttcagccgtctttctttgttcatcgcgctgtcaggaacttaaggtagctgttcaa
acccagagaagggtgcaagtaaaaaatccaaggcaagcacagcaagtccagaggccagaa
catagcgttcaaaagcagacaccaaccctttcaagagcgacctccagtgaaagggaccta
tctgcaagacgcacacacagaagaactagctctgaaagcccgtgcaggggggctgagcga
aacaggcattccagggtgtctgcagccaagcagcaacaagaccaagacaactttaaacgt
cacgcctcatcaccaagcataaacatacttagccgagtgaccagccgttcctcccttcgc
tcgtcttcatctgattcaagtggaagagcaaagagcgaagatgacacaaagaagaaaggg
caccggtctgcatcacggctaaatgacagagttacatggaggaggatcagggatgaagat
gtacctcagatcttgaaaagcactctgccagccaatgcattacctctgatgccttctcct
gacggtgaacagccaaagccaccagctcttccaggaaaactaccaaccattgtccttgca
tcacgcaagacaagtgatgcgacagtccagacagaagatttttcgaataataagaccaac
tcaagcacctctccaacagttgtaacaactcgggtgatcgcagaggaagttgcacgattt
gcactactcagaaagagtactgctacctctgggagtaacccacaagatggagattcagaa
gtctcacttaagagtcacagcaccgtctccacaggaacgtcagatatccatgtgggtgga
gctgtccatttccgccaaggatcccccagcaaggctgcccgaatcactccatttaactac
accccaagccctatttcctgtagcctgcaggacacacagagccaagaagccacaatcgat
gaaaggccagagggaaaaagtgagtcgtag
DBGET
integrated database retrieval system
